Commit Graph

7027 Commits

Author SHA1 Message Date
maralorn
9fa43f69e1 Merge branch 'master' into haskell-updates 2022-12-24 18:31:46 +01:00
Thiago Kenji Okada
17bd7bf0bf
Merge pull request #207516 from r-ryantm/auto-update/streamlit
streamlit: 1.15.0 -> 1.16.0
2022-12-24 11:56:00 +00:00
Dennis Gosnell
ac92ac9908
petrinizer: mark as broken because sbv no longer builds 2022-12-24 16:05:31 +09:00
R. Ryantm
260d40e72e streamlit: 1.15.0 -> 1.16.0 2022-12-24 04:53:42 +00:00
Sandro
b20fb264cc
Merge pull request #197575 from thyol/sratoolkit-init 2022-12-24 02:58:47 +01:00
7c6f434c
7fd752872e
Merge pull request #206769 from collares/gap-4.12.2
gap: 4.12.1 -> 4.12.2
2022-12-22 18:27:13 +00:00
Mauricio Collares
689ff65cde lean: 3.50.0 -> 3.50.1 2022-12-22 13:07:21 -03:00
Doron Behar
914b07da7d Mathematica: Allow overriding src directly. 2022-12-21 12:46:13 +02:00
Evils
2c2f1519b5 kicad: 6.0.9 -> 6.0.10 2022-12-20 15:16:38 +01:00
Evils
8a6772fee6 kicad: bunch of cleanup
add patch to ensure writability of created projects
  (upstream issue 12941)

disable the qa_eeschema test as it fails to find the ngspice lib
  which allows re-enabling tests as a whole on unstable
  there is a patch for this, but it still fails with something else...
  (upstream issue 12491)
  and remove ngspice workaround that doesn't work anymore

set meta.mainProgram
  since for kicad-unstable, the binary isn't called kicad-unstable
2022-12-20 15:14:31 +01:00
Evils
1c3de7e308 kicad-unstable: 2022-09-18 -> 2022-12-19
includes a fix for parallel builds sometimes failing

disables test
  reenabled in next commit which works around the specific failure
2022-12-20 15:14:31 +01:00
Doron Behar
7328cd1015
Merge pull request #206903 from alyaeanyx/qalculate-4.5.0
{libqalculate, qalculate-gtk, qalculate-qt}: 4.4.0 -> 4.5.0
2022-12-20 09:54:13 +02:00
Anderson Torres
5eb3cbe103
Merge pull request #194276 from corngood/dotnet-misc
dotnet: improve rid handling
2022-12-19 18:35:14 -03:00
Justin Bedő
fcae6a2656
Merge pull request #206157 from NixOS/r-updates
R,rPackages: R 4.2.1 -> 4.2.2
2022-12-19 21:25:09 +00:00
David McFarland
13861970f4 treewide: update all dotnet lockfiles 2022-12-19 15:36:25 -04:00
alyaeanyx
2c1e43dd75 {libqalculate, qalculate-gtk, qalculate-qt}: 4.4.0 -> 4.5.0 2022-12-19 20:05:32 +01:00
Mauricio Collares
2f39745cc4 gap: 4.12.1 -> 4.12.2 2022-12-18 17:16:50 -03:00
Valentin Gagarin
f782da699e
Merge pull request #206646 from figsoda/typos 2022-12-18 18:27:57 +01:00
Robert Scott
2d9b5f9e04
Merge pull request #206302 from r-ryantm/auto-update/cvc5
cvc5: 1.0.2 -> 1.0.3
2022-12-18 14:57:22 +00:00
Dmitry Kalinkin
199975755e
Merge pull request #205394 from ShamrockLee/root-update
undefined
2022-12-17 19:58:37 -05:00
figsoda
ec8cb34358 treewide: fix typos 2022-12-17 19:39:44 -05:00
Dmitry Kalinkin
49d5867732 root: move nlohmann_json to propagatedBuildInputs 2022-12-17 17:57:37 -05:00
github-actions[bot]
05ca3d8285
Merge master into staging-next 2022-12-17 06:01:30 +00:00
Jason Miller
8392158289
cudaPackages: add cudaFlags (#205351)
* cudaPackages: add cudaFlags

* cudaNames -> cudaMicroarchitectureNames

* update documentation, remove config for static library removal

* doc link added to flags

* fix whitespace in assignment
2022-12-16 22:00:36 -08:00
Vladimír Čunát
e6cd929c5e
Merge branch 'master' into staging-next 2022-12-16 11:09:31 +01:00
Sandro
2af5bbd2d4
Merge pull request #205900 from pmiddend/crystfel-fix-patch
crystfel: fix symlib hard-coding
2022-12-16 10:30:24 +01:00
Sandro
ddc265fa1e
Merge pull request #204270 from Luflosi/update/boinc 2022-12-16 02:08:16 +01:00
Sandro
89fb5a5252
Merge pull request #203304 from panicgh/dataexplorer-373 2022-12-16 02:05:45 +01:00
github-actions[bot]
b9ac6ee4d9
Merge master into staging-next 2022-12-16 00:02:17 +00:00
R. Ryantm
cdc2972120 cvc5: 1.0.2 -> 1.0.3 2022-12-15 20:56:58 +00:00
Artturin
05a2dfd674 lib.replaceChars: warn about being a deprecated alias
replaceStrings has been in nix since 2015(nix 1.10)

so it is safe to remove the fallback

d6d5885c15
2022-12-15 22:25:51 +02:00
Mauricio Collares
4e4d962445 lean: 3.49.1 -> 3.50.0 2022-12-15 09:46:06 -03:00
Mauricio Collares
1ea8eab31e lean: 3.49.0 -> 3.49.1 2022-12-15 09:46:01 -03:00
Nicolas Benes
4cbba917e0 dataexplorer: 3.6.2 -> 3.7.3
In v3.7.1, the `file.encoding=UTF-8` setting has been moved into the
application itself. It is not needed any more to pass it via the `java`
command line.

The program builds incorrectly for non-x86_64-linux platforms, although
they should be supported. Until the issue is understood and can be
fixed, declare support for only the x86_64-linux platform.
2022-12-15 13:23:30 +01:00
github-actions[bot]
747e072692
Merge master into staging-next 2022-12-14 06:01:05 +00:00
Justin Bedo
4d394bfb48
R: 4.2.1 -> 4.2.2 2022-12-14 15:52:24 +11:00
Robert Scott
bef7b51a7f
Merge pull request #205581 from mimame/weka/3.9.2-3.9.6
weka: 3.9.2 -> 3.9.6
2022-12-14 00:13:33 +00:00
github-actions[bot]
1e7dd98694
Merge master into staging-next 2022-12-14 00:02:18 +00:00
Rick van Schijndel
9833d56c24 treewide: mark packages broken that never built on PLATFORM
Done with the help of https://github.com/Mindavi/nixpkgs-mark-broken
Tool is still WIP but this is one of the first results.

I manually audited the results and removed some results that were not valid.

Note that some of these packages maybe should have more constrained platforms set
instead of broken set, but I think not being perfectly correct is better than
just keep trying to build all these things and never succeeding.

Some observations:

- Some darwin builds require XCode tools
- aarch64-linux builds sometimes suffer from using gcc9
  - gcc9 is getting older and misses some new libraries/features
- Sometimes tools try to do system detection or expect some explicit settings for
  platforms that are not x86_64-linux
2022-12-13 21:40:12 +01:00
Luflosi
06137551e6
boinc: 7.20.2 -> 7.20.5
https://github.com/BOINC/boinc/releases/tag/client_release%2F7.20%2F7.20.5

Also simplify the code a bit by using `lib.versions.majorMinor` as suggested by @SuperSandro2000.
2022-12-13 18:50:42 +01:00
Philipp Middendorf
051fa1056d crystfel: fix symlib hard-coding 2022-12-13 11:56:15 +01:00
Miguel Madrid-Mencía
1f0f9ada86
weka: 3.9.2 -> 3.9.6 2022-12-11 18:37:06 -06:00
github-actions[bot]
99d681c4e7
Merge master into staging-next 2022-12-11 18:01:21 +00:00
Mauricio Collares
99fed31f9d
Merge pull request #205547 from r-ryantm/auto-update/primecount
primecount: 7.4 -> 7.6
2022-12-11 12:33:23 -03:00
Shamrock Lee
e23f5f4f92 root: 6.26.8 -> 6.26.10 2022-12-11 18:00:34 +08:00
Shamrock Lee
f2fcf446d0 root: add xrootd support and workaround the xrootd runpath bug 2022-12-11 18:00:32 +08:00
Shamrock Lee
53f8736f10 root: adjust format 2022-12-11 17:45:55 +08:00
Fabian Affolter
ddb2541b8a
primecount: add changelog to meta 2022-12-11 01:14:49 +01:00
Fabian Affolter
6deae326bf
primesieve: add changelog to meta 2022-12-10 23:44:00 +01:00
R. Ryantm
016aaa261d primesieve: 8.0 -> 11.0 2022-12-10 20:15:07 +00:00
R. Ryantm
d5490032d8 primecount: 7.4 -> 7.6 2022-12-10 20:04:53 +00:00
github-actions[bot]
48b3a17dea
Merge master into staging-next 2022-12-09 12:01:30 +00:00
Vladimír Čunát
9c497bb8d6
Merge branch 'staging-next' into staging 2022-12-09 10:27:46 +01:00
Sandro
89c4ef4384
Merge pull request #204832 from Luflosi/update/yosys 2022-12-09 10:27:31 +01:00
Sandro
d1f210df8a
Merge pull request #199078 from gdinh/add-timeloop
timeloop: init at unstable-2022-10-28 and accelergy: init at unstable-2022-05-03
2022-12-09 09:13:02 +01:00
Grace Dinh
8a23ce4e69 timeloop: init at unstable-2022-11-29 2022-12-08 12:41:22 -08:00
Weijia Wang
fa19b16e93 ecopcr: 0.8.0 -> 1.0.1 2022-12-08 04:35:53 +01:00
Artturi
850fb23aa8
Merge pull request #204214 from wegank/wxgtk30-gtk2-drop
treewide: drop wxGTK30-gtk2
2022-12-06 23:28:43 +02:00
Sandro
84c17bc98f
Merge pull request #204330 from jvanbruegge/isabelle-fix-components 2022-12-06 20:46:39 +01:00
Jan van Brügge
698c7342b7
isabelle: fix build on MacOS 2022-12-06 18:05:26 +00:00
Luflosi
f48ce9295e
abc-verifier: unstable-2022-09-08 -> unstable-2022-11-09 2022-12-06 18:58:31 +01:00
Fabian Affolter
7d3c53e6d1 snakemake: rename GitPython 2022-12-05 21:53:53 +01:00
Fabian Affolter
49dc2b7042 streamlit: rename GitPython 2022-12-05 21:53:11 +01:00
Martin Weinelt
9256404e6b Merge remote-tracking branch 'origin/staging-next' into staging 2022-12-05 13:22:34 +01:00
Vincent Laporte
221b44a071 coq: 8.16.0 → 8.16.1 2022-12-05 09:22:59 +01:00
Martin Weinelt
2c56dc4832 Merge remote-tracking branch 'origin/staging-next' into staging 2022-12-04 22:07:03 +01:00
Nikolay Korotkiy
3332040606
Merge pull request #203029 from sikmir/geogebra
geogebra: 5-0-723-0 → 5-0-745-0, geogebra6: 6-0-723-0 → 6-0-745-0
2022-12-04 17:31:30 +04:00
Nikolay Korotkiy
88ae5d0825
Merge pull request #202805 from r-ryantm/auto-update/cbmc
cbmc: 5.70.0 -> 5.71.0
2022-12-03 23:51:24 +04:00
Jan van Brügge
26c369214e
isabelle: use prebuilt z3
Isabelle requires this specific version of z3 which is being removed
from nixpkgs due to requiring python2 for its build. We can work around
this by patching the distributed binary
2022-12-03 18:34:13 +00:00
Jan van Brügge
d5299641bb
isabelle: make withComponents function use finalAttrs
Before this change
```
(isabelle.overrideAttrs (
  /* whatever */
)).withComponents (/* whatever */)
```
would ignore the `overrideAttrs` and use the normal `isabelle`
derivation instead. This commit fixes this
2022-12-03 16:40:53 +00:00
github-actions[bot]
1ac9e3255b
Merge staging-next into staging 2022-12-03 06:02:18 +00:00
Weijia Wang
eac8b51565
flopoco: init at 4.1.3 (#200459)
Co-authored-by: Sandro <sandro.jaeckel@gmail.com>
2022-12-03 05:26:22 +01:00
John Shaffer
9d8767be46 xcircuit: 3.10.12 -> 3.10.37, maintain 2022-12-02 21:57:29 -06:00
Weijia Wang
07cd65bea2 treewide: drop wxGTK30-gtk2 2022-12-03 03:28:32 +01:00
Martin Weinelt
e3da5a807b Merge remote-tracking branch 'origin/staging-next' into staging 2022-12-03 01:28:01 +01:00
Sandro
e461e83aa7
Merge pull request #191966 from jvanbruegge/isabelle-2022 2022-12-03 00:45:47 +01:00
Pavol Rusnak
85f5d65b7e
Merge pull request #204149 from wegank/viennarna-bump
ViennaRNA: 2.4.18 -> 2.5.1, unbreak on aarch64-darwin
2022-12-03 00:23:09 +01:00
Vincent Laporte
188b935b6d alt-ergo: fix version string 2022-12-03 00:00:05 +01:00
Weijia Wang
df1810c6e8 ViennaRNA: 2.4.18 -> 2.5.1 2022-12-02 18:20:04 +01:00
R. RyanTM
132e60b840
calc: 2.14.1.0 -> 2.14.1.2
Also fixed GitHub source url.
2022-12-02 18:02:05 +08:00
github-actions[bot]
c14692be87
Merge staging-next into staging 2022-11-30 18:01:46 +00:00
Mario Rodas
227de2b3bb
Merge pull request #203387 from wegank/formula-aarch64-linux
formula: unbreak on aarch64-linux
2022-11-30 07:02:00 -05:00
github-actions[bot]
3f79042e89
Merge staging-next into staging 2022-11-29 12:02:06 +00:00
Weijia Wang
280b4b8279
root: fix build on aarch64-linux (#203267) 2022-11-29 01:41:49 -05:00
Martin Weinelt
df2d130ee0 python3Packages.dataclasses: drop
Only required on python36, which was dropped a while ago.
2022-11-29 01:34:58 +01:00
Mauricio Collares
9102f78309
Merge pull request #192525 from r-ryantm/auto-update/pari
pari: 2.13.4 -> 2.15.1
2022-11-28 20:58:42 -03:00
Jack Gerrits
c5be637c72
vowpal-wabbit: 9.0.1 -> 9.6.0
- flatbuffers removed as a dep as the upstream doesn't support installing with flatbuffer support currently and this is an experimental feature
- BUILD_TESTS workaround removed as upstream now properly understands BUILD_TESTING
- `eigen` is a new dependency in this release
- Removed `USE_LATEST_STD` as it was causing an ICE in clang when building on an m1 macbook and it is not strictly necessary for the package
2022-11-29 00:02:14 +08:00
Mauricio Collares
40fddeb8fc giac: mark as broken on aarch64-darwin 2022-11-28 09:33:10 -03:00
Weijia Wang
31dae4a6c0 formula: unbreak on aarch64-linux 2022-11-28 02:56:13 +01:00
Sandro
853077236a
Merge pull request #202124 from SuperSandro2000/dbus-passthru-daemon 2022-11-28 01:35:34 +01:00
Mauricio Collares
3b258a60a6 sage: import pari 2.15.1 update patch 2022-11-27 20:39:59 -03:00
R. Ryantm
081289609e pari: 2.13.4 -> 2.15.1 2022-11-27 20:39:59 -03:00
Robert Scott
d2504ace98
Merge pull request #203249 from aaronjheng/streamlit
streamlit: 1.13.0 -> 1.15.0
2022-11-27 23:10:22 +00:00
Mauricio Collares
dad9d4f76e
Merge pull request #203170 from jiegec/pari
pari: unbreak on aarch64-darwin
2022-11-27 15:15:19 -03:00
Aaron Jheng
8bed9cc42f
streamlit: 1.13.0 -> 1.15.0 2022-11-27 12:57:33 +00:00
Jiajie Chen
91e59727c0 pari: unbreak on aarch64-darwin 2022-11-27 09:39:27 +08:00
K900
420fd2d25b graphia: 3.1 -> 3.2 2022-11-26 15:49:07 +03:00
Nikolay Korotkiy
bb92198f4c
geogebra6: 6-0-723-0 → 6-0-745-0 2022-11-26 14:17:44 +03:00
Nikolay Korotkiy
5b4bf09237
geogebra6: fix the meta data to allow autoupdate
Resolve #188260
2022-11-26 13:58:19 +03:00
Nikolay Korotkiy
ec635b51d6
geogebra: 5-0-723-0 → 5-0-745-0 2022-11-26 13:39:52 +03:00
Robert Schütz
be1fe08f79 surelog: use latest OpenJDK
OpenJDK 11 depends on Python 2.
2022-11-25 20:10:49 -08:00
Sandro
bf8865dc28
Merge pull request #198871 from wegank/aspino-aarch64-darwin 2022-11-25 20:12:58 +01:00
Weijia Wang
c00ddaf144 aspino: remove patchShebangs 2022-11-25 16:48:27 +01:00
Weijia Wang
fc653e9de0 avy: fix build on aarch64-linux 2022-11-25 16:48:03 +01:00
Weijia Wang
ee09ecaca2 glucose: fix build on aarch64-linux 2022-11-25 16:48:03 +01:00
Weijia Wang
017015a82b aspino: fix build 2022-11-25 16:48:03 +01:00
Bobby Rong
e34bc8cc1a
Merge pull request #198055 from jdupak/master
QtRVSim: 0.9.3 -> 0.9.4
2022-11-25 22:50:43 +08:00
Bobby Rong
4315ef82eb
Merge pull request #202657 from 4825764518/master
qalculate-qt: update supported platforms
2022-11-25 21:51:45 +08:00
R. Ryantm
d9af397634 cbmc: 5.70.0 -> 5.71.0 2022-11-25 08:37:13 +00:00
Jonas Heinrich
20193b6d86
Merge pull request #202395 from thyol/muscle
muscle: 3.8.31 -> 5.1.0
2022-11-24 15:47:12 +01:00
Guillaume Girol
6f9188b26b
Merge pull request #201759 from collares/giac-1.9.0.29
giac: 1.9.0-5 -> 1.9.0-29
2022-11-24 14:16:03 +00:00
Jonas Heinrich
57728b51cf
Merge pull request #202404 from thyol/veryfasttree
veryfasttree: init at 3.1.1
2022-11-24 15:14:13 +01:00
Sandro
2ca694f473
Merge pull request #198552 from wegank/wxgtk-games 2022-11-24 14:21:25 +01:00
4825764518
9c363bae16
qalculate-qt: update supported platforms 2022-11-24 05:37:05 -05:00
R. Ryantm
471d8bb07a opensmt: 2.4.2 -> 2.4.3 2022-11-22 20:15:56 +00:00
thyol
cdcb7946ba veryfasttree: init at 3.1.1 2022-11-22 20:45:45 +01:00
thyol
35d3a6fa79 muscle: add myself to maintainers 2022-11-22 20:19:17 +01:00
thyol
d7c8595f62 muscle: 3.8.31 -> 5.1.0 2022-11-22 20:19:17 +01:00
R. Ryantm
7e88b2bef5 form: 4.2.1 -> 4.3.0 2022-11-22 12:01:40 -05:00
thyol
81d6f1c7dc sratoolkit: init at 2.11.3 2022-11-21 20:27:28 +01:00
Sandro Jäckel
c7f5becba3 dbus: remove unused daemon passhtru 2022-11-21 20:23:00 +01:00
R. Ryantm
6ba0d20487 igv: 2.14.1 -> 2.15.1 2022-11-20 14:06:29 +08:00
R. Ryantm
862277ac9d kstars: 3.6.0 -> 3.6.1 2022-11-20 10:52:50 +08:00
Markus Kowalewski
57d39374e2
gromacs: 2022.3 -> 2022.4 2022-11-18 14:37:22 +01:00
Mauricio Collares
339f72586a giac: 1.9.0-5 -> 1.9.0-29 2022-11-18 09:15:22 -03:00
Pascal Bach
b85c2a060f
Merge pull request #200871 from lorenz/update-dsview
dsview: 1.1.2 -> 1.2.1
2022-11-16 21:18:59 +01:00
sternenseemann
a110f08f12 ocamlPackages.extlib: rename from ocaml_extlib
This matches the name used in dune and on OPAM.
2022-11-16 14:30:37 +01:00
Grace Dinh
d3153abe7d accelergy: init at unstable-2022-05-03 2022-11-15 17:06:02 -08:00
Sandro Jäckel
da3200b7b6
Revert "gplates: fix failing build"
This reverts commit 8a236e246a.
2022-11-16 00:29:02 +01:00
Sergei Trofimovich
e4d99ffc58
Merge pull request #201383 from yurket/d-seams_zhf_fix
d-seams: fix failing build
2022-11-15 22:57:02 +00:00
yurket
4e4a021fd7 d-seams: fix failing builds
cxxopts failing to build with clang11:

  /build/source/src/include/external/cxxopts.hpp:488:42: error: no member named 'numeric_limits' in namespace 'std'
            if (u > static_cast<U>(-std::numeric_limits<T>::min()))

Use the patch from upstream, which updates cxxopts 2.2.0 -> 3.0.0
2022-11-15 14:05:05 -08:00
Aaron Jheng
678ccdf716
element: mark as broken on darwin 2022-11-14 02:16:43 +00:00
Robert Scott
ea6d354b84
Merge pull request #201044 from fedeinthemix/update-xyce
xyce: 7.4.0 -> 7.6.0
2022-11-13 20:13:29 +00:00
Federico Beffa
d36e0be2ea xyce: 7.4.0 -> 7.6.0 2022-11-13 16:41:14 +01:00
Mario Rodas
16df31b2cd
Merge pull request #200755 from collares/lean-3.49.0
lean: 3.48.0 -> 3.49.0
2022-11-13 09:04:08 -05:00
Robert Schütz
61c207555b hal-hardware-analyzer: use igraph 0.9 2022-11-12 20:07:20 -08:00
yurket
8a236e246a gplates: fix failing build
Started failing after the commit 11ea0e99b7 (Python 3.9->3.10 upgrade) with error:

    CMake Error at .../lib/cmake/Boost-1.75.0/BoostConfig.cmake:141 (find_package):
  Could not find a package configuration file provided by boost_python310

It appears that boost <= 1.78 fails to find Python with double digits in the minor version (like X.YZ)
2022-11-12 11:33:42 -08:00
Lorenz Brun
c35b5503f4 dsview: 1.1.2 -> 1.2.1 2022-11-12 16:04:11 +01:00
Mauricio Collares
c87af38741 lean: 3.48.0 -> 3.49.0 2022-11-11 17:33:01 -03:00
R. Ryantm
139ba95570 cbmc: 5.69.1 -> 5.70.0 2022-11-11 18:08:36 +08:00
Weijia Wang
699e05b52a
root5: migrate to gsl (#200455) 2022-11-10 18:59:19 -05:00
7c6f434c
511bbd4c78
Merge pull request #200059 from r-ryantm/auto-update/clingo
clingo: 5.6.1 -> 5.6.2
2022-11-10 10:32:04 +00:00
Shamrock Lee
a664ec27f4 root: add package test test-thisroot 2022-11-10 09:27:35 +08:00
Shamrock Lee
7f91dec5dd root: wrap the executable and patch thisroot.* 2022-11-10 09:23:52 +08:00
Dmitry Kalinkin
25fd03cf72
Merge pull request #200412 from wegank/root-darwin
root: 6.26.06 -> 6.26.08
2022-11-09 18:16:38 -05:00
Weijia Wang
d474e39f7d root: fix build on aarch64-darwin 2022-11-09 21:03:59 +01:00
Weijia Wang
5d5c6ded1a root: 6.26.06 -> 6.26.08 2022-11-09 18:19:45 +01:00
Shamrock Lee
0106a68555
root: enable davix and ssl support (#200096)
This enables CERN ROOT to open file urls with scheme
`davs://` and `https://`.

The inclusion of `openssl` in buildInputs
will increase neither closure size nor rebuild frequency,
since `python3`, which depends on `openssl`, is already a dependency.
2022-11-09 11:31:37 -05:00
Fabian Affolter
95ed815b50
Merge pull request #200234 from r-ryantm/auto-update/delly
delly: 1.1.5 -> 1.1.6
2022-11-09 08:00:15 +01:00
Artturi
3e2445be79
Merge pull request #200145 from hzeller/20221107-update-surelog-uhdm-plugin
Fix for darwin build.
2022-11-09 02:09:35 +02:00