- also create vtk_7 as several packages don't build with 8.x:
- itk5: vtkVersion.h header not found at compile time
- ants: version in tree (2.2.0) is incompatible with 8.2
- itk4: ants depends on both vtk and itk4, so use vtk_7
- gdcm: vtk header issue
- python3Packages.vtk: Python C API compilation error with Python 3.8
- upgrade vtkWithQt4 -> vtkWithQt5
This makes packages use lapack and blas, which can wrap different
BLAS/LAPACK implementations.
treewide: cleanup from blas/lapack changes
A few issues in the original treewide:
- can’t assume blas64 is a bool
- unused commented code
This package consists mostly of command-line tools, but there are also two qt5-based image viewers (`mrview` and `shview`). I have provided an option `withGui = true` to allow users to disable these viewers. They work on NixOS but unlikely to work out-of-the box on non-NixOS Linux (see #62169), but I've refrained from asserting that they shouldn't be built since a user might want to fiddle with runtime GL stuff.
Some programs rely on FSL and/or ANTs backends; I have somewhat heavy-handedly wrapped all binaries to point to ANTs, while FSL is not available in Nix at the moment and has a non-commercial license so would be convenient to disable by default for Hydra builds.
In 87a19e9048 I merged staging-next into master using the GitHub gui as intended.
In ac241fb7a5 I merged master into staging-next for the next staging cycle, however, I accidentally pushed it to master.
Thinking this may cause trouble, I reverted it in 0be87c7979. This was however wrong, as it "removed" master.
This reverts commit 0be87c7979.
I merged master into staging-next but accidentally pushed it to master.
This should get us back to 87a19e9048.
This reverts commit ac241fb7a5, reversing
changes made to 76a439239e.
