pdi: init at 1.7.1

Co-authored-by: theabm <andres_bermeo@outlook.com>

pkgs/by-name/pd/pdi/package.nix

@@ -0,0 +1,88 @@
+{
+  lib,
+  stdenv,
+  fetchFromGitHub,
+
+  # nativeBuildInputs
+  python3,
+  cmake,
+  gfortran,
+  pkg-config,
+  hdf5-mpi,
+  zpp,
+
+  # buildInputs
+  gbenchmark,
+  libyaml,
+  mpi,
+  spdlog,
+
+  # passthru
+  nix-update-script,
+  testers,
+  pdi,
+}:
+let
+  python = python3.withPackages (
+    p: with p; [
+      distutils
+      setuptools
+    ]
+  );
+in
+stdenv.mkDerivation rec {
+  pname = "pdi";
+  version = "1.7.1";
+
+  src = fetchFromGitHub {
+    owner = "pdidev";
+    repo = "pdi";
+    rev = "refs/tags/${version}-gh";
+    hash = "sha256-VTbXsUUJb/6zNyn4QXNHajgzzgjSwdW/d+bTSDcpRaE=";
+  };
+
+  # Current hdf5 version in nixpkgs is 1.14.4.3 which is 4 numbers long and doesn't match the 3 number regex. :')
+  # Patch it to make it match a 4 number-long version.
+  postPatch = ''
+    substituteInPlace plugins/decl_hdf5/cmake/FindHDF5.cmake \
+      --replace-fail '"H5_VERSION[ \t]+\"([0-9]+\\.[0-9]+\\.[0-9]+)' '"H5_VERSION[ \t]+\"([0-9]+\\.[0-9]+\\.[0-9]+\\.[0-9]+)'
+  '';
+
+  nativeBuildInputs = [
+    cmake
+    gfortran
+    pkg-config
+    python
+    hdf5-mpi
+    zpp
+  ];
+
+  buildInputs = [
+    gbenchmark
+    hdf5-mpi
+    libyaml
+    mpi
+    spdlog
+  ];
+
+  cmakeFlags = [
+    # Force using nix gbenchmark instead of vendored version
+    "-DUSE_benchmark=SYSTEM"
+  ];
+
+  passthru = {
+    updateScript = nix-update-script { };
+    tests.version = testers.testVersion {
+      package = pdi;
+      command = "pdirun";
+    };
+  };
+
+  meta = {
+    description = "PDI supports loose coupling of simulation codes with data handling libraries";
+    homepage = "https://pdi.dev/master/";
+    license = lib.licenses.bsd3;
+    mainProgram = "pdirun";
+    maintainers = with lib.maintainers; [ GaetanLepage ];
+  };
+}