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vcftools: init at 0.1.15 (#31339)

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rybern 2017-11-16 02:52:56 -05:00 committed by Tuomas Tynkkynen
parent 7ce825d6ab
commit ef0486b1f9
2 changed files with 26 additions and 0 deletions
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24
pkgs/applications/science/biology/vcftools/default.nix Executable file
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@ -0,0 +1,24 @@
{ stdenv, fetchFromGitHub, htslib, zlib, autoreconfHook, pkgconfig, perl }:
stdenv.mkDerivation rec {
name = "${pname}-${version}";
pname = "vcftools";
version = "0.1.15";
src = fetchFromGitHub {
repo = pname;
owner = "vcftools";
rev = "v${version}";
sha256 = "15yxr4kidqb42gkbd6rjra6b07wpl6rgivlh9q73yavh5myafqk4";
};
buildInputs = [ autoreconfHook pkgconfig zlib perl ];
meta = with stdenv.lib; {
description = "A set of tools written in Perl and C++ for working with VCF files, such as those generated by the 1000 Genomes Project";
license = licenses.lgpl3;
platforms = platforms.linux;
homepage = https://vcftools.github.io/index.html;
maintainers = [ maintainers.rybern ];
};
}

2
pkgs/top-level/all-packages.nix
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@ -4860,6 +4860,8 @@ with pkgs;
vboot_reference = callPackage ../tools/system/vboot_reference { };
vcftools = callPackage ../applications/science/biology/vcftools { };
vcsh = callPackage ../applications/version-management/vcsh {
inherit (perlPackages) ShellCommand TestMost;
};