sage: Add as passthru.tests to critical dependencies

This commit is contained in:
Tom Hubrecht 2024-05-06 14:13:20 +02:00
parent 48833103ac
commit de1618552c
23 changed files with 109 additions and 2 deletions

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@ -1,6 +1,9 @@
{ lib, stdenv
, fetchFromBitbucket
, autoreconfHook
# Reverse dependency
, sage
}:
stdenv.mkDerivation rec {
@ -20,6 +23,8 @@ stdenv.mkDerivation rec {
autoreconfHook
];
passthru.tests = { inherit sage; };
meta = with lib; {
description = "Littlewood-Richardson calculator";
homepage = "http://math.rutgers.edu/~asbuch/lrcalc/";

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@ -7,6 +7,9 @@
, gmp
, cython
, cysignals
# Reverse dependency
, sage
}:
buildPythonPackage rec {
@ -53,6 +56,8 @@ buildPythonPackage rec {
make check
'';
passthru.tests = { inherit sage; };
meta = with lib; {
description = "Cython bindings for PARI";
license = licenses.gpl2Plus;

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@ -4,6 +4,9 @@
, buildPythonPackage
, cython
, pariSupport ? true, pari # for interfacing with the PARI/GP signal handler
# Reverse dependency
, sage
}:
assert pariSupport -> pari != null;
@ -46,6 +49,8 @@ buildPythonPackage rec {
enableParallelBuilding = true;
passthru.tests = { inherit sage; };
meta = with lib; {
description = "Interrupt and signal handling for Cython";
mainProgram = "cysignals-CSI";

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@ -8,6 +8,9 @@
, gdb
, numpy
, ncurses
# Reverse dependency
, sage
}:
let
@ -57,6 +60,8 @@ in buildPythonPackage rec {
doCheck = false;
# doCheck = !stdenv.isDarwin;
passthru.tests = { inherit sage; };
# force regeneration of generated code in source distributions
# https://github.com/cython/cython/issues/5089
setupHook = ./setup-hook.sh;

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@ -15,6 +15,9 @@
, fplll
, numpy
# Reverse dependency
, sage
# tests
, pytestCheckHook
}:
@ -72,6 +75,8 @@ buildPythonPackage rec {
export PY_IGNORE_IMPORTMISMATCH=1
'';
passthru.tests = { inherit sage; };
meta = with lib; {
description = "A Python interface for fplll";
changelog = "https://github.com/fplll/fpylll/releases/tag/${version}";

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@ -5,6 +5,9 @@
, gmp
, mpfr
, libmpc
# Reverse dependency
, sage
}:
let
@ -29,6 +32,8 @@ buildPythonPackage {
pythonImportsCheck = [ "gmpy2" ];
passthru.tests = { inherit sage; };
meta = with lib; {
description = "GMP/MPIR, MPFR, and MPC interface to Python 2.6+ and 3.x";
homepage = "https://github.com/aleaxit/gmpy/";

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@ -7,6 +7,9 @@
, typing-extensions
, toml
, zipp
# Reverse dependency
, sage
}:
buildPythonPackage rec {
@ -41,6 +44,8 @@ buildPythonPackage rec {
"importlib_metadata"
];
passthru.tests = { inherit sage; };
meta = with lib; {
description = "Read metadata from Python packages";
homepage = "https://importlib-metadata.readthedocs.io/";

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@ -10,6 +10,9 @@
# dependencies
, importlib-metadata
# Reverse dependency
, sage
# tests
, jaraco-collections
, pytestCheckHook
@ -46,6 +49,8 @@ buildPythonPackage rec {
"importlib_resources"
];
passthru.tests = { inherit sage; };
meta = with lib; {
description = "Read resources from Python packages";
homepage = "https://importlib-resources.readthedocs.io/";

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@ -18,6 +18,9 @@
, pyzmq
, tornado
, traitlets
# Reverse dependency
, sage
}:
buildPythonPackage rec {
@ -63,6 +66,7 @@ buildPythonPackage rec {
passthru.tests = {
pytest = callPackage ./tests.nix { };
inherit sage;
};
meta = {

View File

@ -29,6 +29,9 @@
, notebook
, qtconsole
# Reverse dependency
, sage
# Test dependencies
, pickleshare
, pytest-asyncio
@ -106,6 +109,8 @@ buildPythonPackage rec {
"test_clipboard_get"
];
passthru.tests = { inherit sage; };
meta = with lib; {
description = "IPython: Productive Interactive Computing";
downloadPage = "https://github.com/ipython/ipython/";

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@ -12,6 +12,9 @@
, setuptools
, sphinxcontrib-log-cabinet
, sphinx-issues
# Reverse dependency
, sage
}:
buildPythonPackage rec {
@ -76,6 +79,8 @@ buildPythonPackage rec {
inherit meta;
};
passthru.tests = { inherit sage; };
meta = with lib; {
changelog = "https://github.com/pallets/jinja/blob/${version}/CHANGES.rst";
description = "Very fast and expressive template engine";

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@ -7,6 +7,9 @@
, traitlets
, pip
, pytestCheckHook
# Reverse dependency
, sage
}:
buildPythonPackage rec {
@ -61,6 +64,8 @@ buildPythonPackage rec {
pythonImportsCheck = [ "jupyter_core" ];
passthru.tests = { inherit sage; };
meta = with lib; {
description = "Base package on which Jupyter projects rely";
homepage = "https://jupyter.org/";

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@ -69,6 +69,9 @@
# required for headless detection
, libX11
, wayland
# Reverse dependency
, sage
}:
let
@ -183,6 +186,8 @@ buildPythonPackage rec {
};
};
passthru.tests = { inherit sage; };
env.MPLSETUPCFG = writeText "mplsetup.cfg" (lib.generators.toINI {} passthru.config);
# Encountering a ModuleNotFoundError, as describved and investigated at:

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@ -2,6 +2,9 @@
, fetchPypi
, buildPythonPackage
, cython
# Reverse dependency
, sage
}:
buildPythonPackage rec {
@ -19,6 +22,8 @@ buildPythonPackage rec {
pythonImportsCheck = [ "memory_allocator" ];
passthru.tests = { inherit sage; };
meta = with lib; {
description = "An extension class to allocate memory easily with cython";
homepage = "https://github.com/sagemath/memory_allocator/";

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@ -5,6 +5,9 @@
, isPyPy
, setuptools
, pytestCheckHook
# Reverse dependency
, sage
}:
buildPythonPackage rec {
@ -29,6 +32,8 @@ buildPythonPackage rec {
];
};
passthru.tests = { inherit sage; };
nativeCheckInputs = [
pytestCheckHook
];

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@ -19,6 +19,9 @@
# tests
, pytest-xdist
, pytestCheckHook
# reverse dependency
, sage
}:
buildPythonPackage rec {
@ -53,6 +56,8 @@ buildPythonPackage rec {
];
};
passthru.tests = { inherit sage; };
nativeCheckInputs = [
pytest-xdist
pytestCheckHook

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@ -19,6 +19,9 @@
, blas
, lapack
# Reverse dependency
, sage
# tests
, hypothesis
, pytest-xdist
@ -177,6 +180,7 @@ in buildPythonPackage rec {
blas = blas.provider;
blasImplementation = blas.implementation;
inherit cfg;
tests = { inherit sage; };
};
# Disable test

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@ -3,6 +3,9 @@
, fetchPypi
, setuptools
, ptyprocess
# Reverse dependency
, sage
}:
buildPythonPackage (rec {
@ -24,6 +27,8 @@ buildPythonPackage (rec {
propagatedBuildInputs = [ ptyprocess ];
passthru.tests = { inherit sage; };
meta = with lib; {
homepage = "http://www.noah.org/wiki/Pexpect";
description = "Automate interactive console applications such as ssh, ftp, etc";

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@ -7,7 +7,7 @@
, defusedxml, olefile, freetype, libjpeg, zlib, libtiff, libwebp, libxcrypt, tcl, lcms2, tk, libX11
, libxcb, openjpeg, libimagequant, numpy, pytestCheckHook, setuptools
# for passthru.tests
, imageio, matplotlib, pilkit, pydicom, reportlab
, imageio, matplotlib, pilkit, pydicom, reportlab, sage
}@args:
import ./generic.nix (rec {
@ -24,7 +24,7 @@ import ./generic.nix (rec {
};
passthru.tests = {
inherit imageio matplotlib pilkit pydicom reportlab;
inherit imageio matplotlib pilkit pydicom reportlab sage;
};
meta = with lib; {

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@ -9,6 +9,9 @@
, cysignals
, gmpy2
, sphinx
# Reverse dependency
, sage
}:
buildPythonPackage rec {
@ -54,6 +57,8 @@ buildPythonPackage rec {
mv docs/build/html "$doc/share/doc/pplpy"
'';
passthru.tests = { inherit sage; };
meta = with lib; {
description = "A Python wrapper for ppl";
homepage = "https://gitlab.com/videlec/pplpy";

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@ -4,6 +4,9 @@
, primecount
, cython
, cysignals
# Reverse dependency
, sage
}:
buildPythonPackage rec {
@ -25,6 +28,8 @@ buildPythonPackage rec {
pythonImportsCheck = [ "primecountpy" ];
passthru.tests = { inherit sage; };
meta = with lib; {
description = "Cython interface for C++ primecount library";
homepage = "https://github.com/dimpase/primecountpy/";

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@ -25,6 +25,9 @@
, xsimd
, blas
, lapack
# Reverse dependency
, sage
}:
let
@ -193,6 +196,7 @@ in buildPythonPackage {
# Pass it the names of the datasets to update their hashes
++ (builtins.attrNames datasetsHashes)
;
tests = { inherit sage; };
};
SCIPY_USE_G77_ABI_WRAPPER = 1;

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@ -3,6 +3,9 @@
, fetchPypi
, glibcLocales
, mpmath
# Reverse dependency
, sage
}:
buildPythonPackage rec {
@ -27,6 +30,8 @@ buildPythonPackage rec {
export LANG="en_US.UTF-8"
'';
passthru.tests = { inherit sage; };
meta = with lib; {
description = "A Python library for symbolic mathematics";
mainProgram = "isympy";