Merge staging-next into staging

maintainers/maintainer-list.nix

@@ -1488,7 +1488,7 @@
     name = "Felipe Espinoza";
   };
   fgaz = {
-    email = "francygazz@gmail.com";
+    email = "fgaz@fgaz.me";
     github = "fgaz";
     name = "Francesco Gazzetta";
   };
@@ -1759,6 +1759,11 @@
     email = "commits@schurr.at";
     github = "hansjoergschurr";
     name = "Hans-Jörg Schurr";
+    };
+  HaoZeke = {
+    email = "r95g10@gmail.com";
+    github = "haozeke";
+    name = "Rohit Goswami";
   };
   haslersn = {
     email = "haslersn@fius.informatik.uni-stuttgart.de";

nixos/modules/programs/way-cooler.nix

@@ -8,7 +8,7 @@ let
 
   wcWrapped = pkgs.writeShellScriptBin "way-cooler" ''
     ${cfg.extraSessionCommands}
-    exec ${pkgs.dbus.dbus-launch} --exit-with-session ${way-cooler}/bin/way-cooler
+    exec ${pkgs.dbus}/bin/dbus-run-session ${way-cooler}/bin/way-cooler
   '';
   wcJoined = pkgs.symlinkJoin {
     name = "way-cooler-wrapped";

nixos/modules/services/misc/gitea.nix

@@ -46,6 +46,9 @@ let
     ROOT_PATH = ${cfg.log.rootPath}
     LEVEL = ${cfg.log.level}
 
+    [service]
+    DISABLE_REGISTRATION = ${boolToString cfg.disableRegistration}
+
     ${cfg.extraConfig}
   '';
 in
@@ -248,6 +251,18 @@ in
         description = "Upper level of template and static files path.";
       };
 
+      disableRegistration = mkEnableOption "the registration lock" // {
+        description = ''
+          By default any user can create an account on this <literal>gitea</literal> instance.
+          This can be disabled by using this option.
+
+          <emphasis>Note:</emphasis> please keep in mind that this should be added after the initial
+          deploy unless <link linkend="opt-services.gitea.useWizard">services.gitea.useWizard</link>
+          is <literal>true</literal> as the first registered user will be the administrator if
+          no install wizard is used.
+        '';
+      };
+
       extraConfig = mkOption {
         type = types.str;
         default = "";
@@ -263,7 +278,7 @@ in
       description = "gitea";
       after = [ "network.target" ] ++ lib.optional usePostgresql "postgresql.service" ++ lib.optional useMysql "mysql.service";
       wantedBy = [ "multi-user.target" ];
-      path = [ gitea.bin ];
+      path = [ gitea.bin pkgs.gitAndTools.git ];
 
       preStart = let
         runConfig = "${cfg.stateDir}/custom/conf/app.ini";

nixos/modules/system/boot/stage-1-init.sh

@@ -340,6 +340,10 @@ mountFS() {
                 echo "resizing $device..."
                 e2fsck -fp "$device"
                 resize2fs "$device"
+            elif [ "$fsType" = f2fs ]; then
+                echo "resizing $device..."
+                fsck.f2fs -fp "$device"
+                resize.f2fs "$device" 
             fi
             ;;
     esac

nixos/modules/system/boot/stage-1.nix

@@ -127,8 +127,8 @@ let
       copy_bin_and_libs ${pkgs.kmod}/bin/kmod
       ln -sf kmod $out/bin/modprobe
 
-      # Copy resize2fs if needed.
+      # Copy resize2fs if any ext* filesystems are to be resized
-      ${optionalString (any (fs: fs.autoResize) fileSystems) ''
+      ${optionalString (any (fs: fs.autoResize && (lib.hasPrefix "ext" fs.fsType)) fileSystems) ''
         # We need mke2fs in the initrd.
         copy_bin_and_libs ${pkgs.e2fsprogs}/sbin/resize2fs
       ''}

nixos/modules/tasks/filesystems/f2fs.nix

@@ -4,6 +4,7 @@ with lib;
 
 let
   inInitrd = any (fs: fs == "f2fs") config.boot.initrd.supportedFilesystems;
+  fileSystems = filter (x: x.fsType == "f2fs") config.system.build.fileSystems;
 in
 {
   config = mkIf (any (fs: fs == "f2fs") config.boot.supportedFilesystems) {
@@ -14,6 +15,11 @@ in
 
     boot.initrd.extraUtilsCommands = mkIf inInitrd ''
       copy_bin_and_libs ${pkgs.f2fs-tools}/sbin/fsck.f2fs
+      ${optionalString (any (fs: fs.autoResize) fileSystems) ''
+        # We need f2fs-tools' tools to resize filesystems
+        copy_bin_and_libs ${pkgs.f2fs-tools}/sbin/resize.f2fs
+      ''}
+
     '';
   };
 }

nixos/tests/gitea.nix

@@ -64,6 +64,7 @@ with pkgs.lib;
     machine =
       { config, pkgs, ... }:
       { services.gitea.enable = true;
+        services.gitea.disableRegistration = true;
       };
 
     testScript = ''
@@ -72,6 +73,7 @@ with pkgs.lib;
       $machine->waitForUnit('gitea.service');
       $machine->waitForOpenPort('3000');
       $machine->succeed("curl --fail http://localhost:3000/");
+      $machine->succeed("curl --fail http://localhost:3000/user/sign_up | grep 'Registration is disabled. Please contact your site administrator.'");
     '';
   };
 }

pkgs/applications/altcoins/clightning.nix

@@ -1,17 +1,22 @@
 { stdenv, python3, pkgconfig, which, libtool, autoconf, automake,
-  autogen, sqlite, gmp, zlib, fetchFromGitHub, fetchpatch }:
+  autogen, sqlite, gmp, zlib, fetchzip }:
 
 with stdenv.lib;
 stdenv.mkDerivation rec {
   name = "clightning-${version}";
-  version = "0.6.2";
+  version = "0.6.3";
 
-  src = fetchFromGitHub {
+  src = fetchzip {
-    fetchSubmodules = true;
+    #
-    owner = "ElementsProject";
+    # NOTE 0.6.3 release zip was bugged, this zip is a fix provided by the team
-    repo = "lightning";
+    # https://github.com/ElementsProject/lightning/issues/2254#issuecomment-453791475
-    rev = "v${version}";
+    #
-    sha256 = "18yns0yyf7kc4p4n1crxdqh37j9faxkx216nh2ip7cxj4x8bf9gx";
+    # replace url with:
+    #   https://github.com/ElementsProject/lightning/releases/download/v${version}/clightning-v${version}.zip
+    # for future relases
+    #
+    url = "https://github.com/ElementsProject/lightning/files/2752675/clightning-v0.6.3.zip";
+    sha256 = "0k5pwimwn69pcakiq4a7qnjyf4i8w1jlacwrjazm1sfivr6nfiv6";
   };
 
   enableParallelBuilding = true;
@@ -19,21 +24,12 @@ stdenv.mkDerivation rec {
   nativeBuildInputs = [ autoconf autogen automake libtool pkgconfig which ];
   buildInputs = [ sqlite gmp zlib python3 ];
 
-  makeFlags = [ "prefix=$(out)" ];
+  makeFlags = [ "prefix=$(out) VERSION=v${version}" ];
 
   configurePhase = ''
     ./configure --prefix=$out --disable-developer --disable-valgrind
   '';
 
-  # NOTE: remove me in 0.6.3
-  patches = [
-    (fetchpatch {
-      name = "clightning_0_6_2-compile-error.patch";
-      url = https://patch-diff.githubusercontent.com/raw/ElementsProject/lightning/pull/2070.patch;
-      sha256 = "1576fqik5zcpz5zsvp2ks939bgiz0jc22yf24iv61000dd5j6na9";
-    })
-  ];
-
   postPatch = ''
     echo "" > tools/refresh-submodules.sh
     patchShebangs tools/generate-wire.py

pkgs/applications/editors/android-studio/default.nix

@@ -12,11 +12,15 @@ let
     build = "182.5199772";
     sha256Hash = "0dracganibnkyapn2pk2qqnxpwmii57371ycri4nccaci9v9pcjw";
   };
-  betaVersion = stableVersion;
+  betaVersion = {
+    version = "3.4.0.10"; # "Android Studio 3.4 Beta 1"
+    build = "183.5217543";
+    sha256Hash = "0yd9l4py82i3gl1nvfwlhfx12hzf1mih8ylgdl3r85hhlqs7w2dm";
+  };
   latestVersion = { # canary & dev
-    version = "3.4.0.9"; # "Android Studio 3.4 Canary 10"
+    version = "3.5.0.0"; # "Android Studio 3.5 Canary 1"
-    build = "183.5202479";
+    build = "183.5215047";
-    sha256Hash = "067mkf8n7bwv0f900d6d2hwxdhcgnp6dxqf6v81y1hf285ybymld";
+    sha256Hash = "1f7lllj85fia02hgy4ksbqh80sdcml16fv1g892jc6lwykjrdw5y";
   };
 in rec {
   # Old alias

pkgs/applications/editors/jetbrains/default.nix

@@ -250,12 +250,12 @@ in
 
   clion = buildClion rec {
     name = "clion-${version}";
-    version = "2018.3.1"; /* updated by script */
+    version = "2018.3.3"; /* updated by script */
     description  = "C/C++ IDE. New. Intelligent. Cross-platform";
     license = stdenv.lib.licenses.unfree;
     src = fetchurl {
       url = "https://download.jetbrains.com/cpp/CLion-${version}.tar.gz";
-      sha256 = "0wv4hmh71ca9fl4pslf8nn6wppa98sc94272z4nb42jbs6dnb9ji"; /* updated by script */
+      sha256 = "1pffxq69ihdc55lsy2q56vlanpgyks0g82n40b29j4m66flmxbkl"; /* updated by script */
     };
     wmClass = "jetbrains-clion";
     update-channel = "CLion Release"; # channel's id as in http://www.jetbrains.com/updates/updates.xml
@@ -276,12 +276,12 @@ in
 
   goland = buildGoland rec {
     name = "goland-${version}";
-    version = "2018.3.1"; /* updated by script */
+    version = "2018.3.2"; /* updated by script */
     description = "Up and Coming Go IDE";
     license = stdenv.lib.licenses.unfree;
     src = fetchurl {
       url = "https://download.jetbrains.com/go/${name}.tar.gz";
-      sha256 = "0z3z9hc7h3n63mfy7c5zh5sz8c0bzgxk79xamw08sxphrsjahasz"; /* updated by script */
+      sha256 = "0vnw6zc23dibpk1z7yg1lrgjznqc7508g1azybml878h6yykm5a4"; /* updated by script */
     };
     wmClass = "jetbrains-goland";
     update-channel = "GoLand Release";
@@ -289,12 +289,12 @@ in
 
   idea-community = buildIdea rec {
     name = "idea-community-${version}";
-    version = "2018.3.1"; /* updated by script */
+    version = "2018.3.3"; /* updated by script */
     description = "Integrated Development Environment (IDE) by Jetbrains, community edition";
     license = stdenv.lib.licenses.asl20;
     src = fetchurl {
       url = "https://download.jetbrains.com/idea/ideaIC-${version}.tar.gz";
-      sha256 = "1zi4aib1h4jfn241gsg83jsqfj99fpbci4pkh8xarap6xrallyiq"; /* updated by script */
+      sha256 = "1c9x3m7dknqr6yxqnn2ch3akwm6yskpmy32hcbjg7s87g1n6gy8m"; /* updated by script */
     };
     wmClass = "jetbrains-idea-ce";
     update-channel = "IntelliJ IDEA Release";
@@ -302,12 +302,12 @@ in
 
   idea-ultimate = buildIdea rec {
     name = "idea-ultimate-${version}";
-    version = "2018.3.1"; /* updated by script */
+    version = "2018.3.3"; /* updated by script */
     description = "Integrated Development Environment (IDE) by Jetbrains, requires paid license";
     license = stdenv.lib.licenses.unfree;
     src = fetchurl {
       url = "https://download.jetbrains.com/idea/ideaIU-${version}-no-jdk.tar.gz";
-      sha256 = "0x0dplmv37gqdbrwxsx6xaix9dbaa6kqc09ganln5r4nl2bg64i8"; /* updated by script */
+      sha256 = "1dj39hs63xba2jfk3sd2yiq7vk7758axrc5549krfd1aaawl4sl8"; /* updated by script */
     };
     wmClass = "jetbrains-idea";
     update-channel = "IntelliJ IDEA Release";
@@ -328,12 +328,12 @@ in
 
   pycharm-community = buildPycharm rec {
     name = "pycharm-community-${version}";
-    version = "2018.3.1"; /* updated by script */
+    version = "2018.3.3"; /* updated by script */
     description = "PyCharm Community Edition";
     license = stdenv.lib.licenses.asl20;
     src = fetchurl {
       url = "https://download.jetbrains.com/python/${name}.tar.gz";
-      sha256 = "02vs8nxxm139jl622nhxs59i9gw9rs5rjymkg8a0ajpybang24jk"; /* updated by script */
+      sha256 = "0dnjkq1qbxc05cxafi5hw6pw9wya0w44ni32b34sclq26xr6blvj"; /* updated by script */
     };
     wmClass = "jetbrains-pycharm-ce";
     update-channel = "PyCharm Release";
@@ -341,12 +341,12 @@ in
 
   pycharm-professional = buildPycharm rec {
     name = "pycharm-professional-${version}";
-    version = "2018.3.1"; /* updated by script */
+    version = "2018.3.3"; /* updated by script */
     description = "PyCharm Professional Edition";
     license = stdenv.lib.licenses.unfree;
     src = fetchurl {
       url = "https://download.jetbrains.com/python/${name}.tar.gz";
-      sha256 = "0g4ag9lid2km69s5g31hhhvz3zjx52wxca1q4qz1h0s9km0ca1sq"; /* updated by script */
+      sha256 = "0z6qjc3qh58ds338rlfzi9446y3sghpnccaachkja2q59f97dfma"; /* updated by script */
     };
     wmClass = "jetbrains-pycharm";
     update-channel = "PyCharm Release";
@@ -354,15 +354,15 @@ in
 
   rider = buildRider rec {
     name = "rider-${version}";
-    version = "2018.2.3"; /* updated by script */
+    version = "2018.3.1"; /* updated by script */
     description = "A cross-platform .NET IDE based on the IntelliJ platform and ReSharper";
     license = stdenv.lib.licenses.unfree;
     src = fetchurl {
       url = "https://download.jetbrains.com/rider/JetBrains.Rider-${version}.tar.gz";
-      sha256 = "1g2b7wszviknzd4srgcvwmci0pxyjbcmjzb4fg5clh62wwdpa16n"; /* updated by script */
+      sha256 = "0ghk819ik28y9b61vb2h463zbvvq1n2wl778czkakc4qjba2qnks"; /* updated by script */
     };
     wmClass = "jetbrains-rider";
-    update-channel = "Rider 2018.2";
+    update-channel = "Rider 2018.3";
   };
 
   ruby-mine = buildRubyMine rec {
@@ -380,12 +380,12 @@ in
 
   webstorm = buildWebStorm rec {
     name = "webstorm-${version}";
-    version = "2018.3.1"; /* updated by script */
+    version = "2018.3.3"; /* updated by script */
     description = "Professional IDE for Web and JavaScript development";
     license = stdenv.lib.licenses.unfree;
     src = fetchurl {
       url = "https://download.jetbrains.com/webstorm/WebStorm-${version}.tar.gz";
-      sha256 = "1l3jy1ifx82gdnvpgz77ycxbwymcwwd830i4mfidkr9gkndlxpsp"; /* updated by script */
+      sha256 = "0q8njbrll7qgijnxqic2mpca2jb2plpd677xdj5v72mm66mvxmss"; /* updated by script */
     };
     wmClass = "jetbrains-webstorm";
     update-channel = "WebStorm Release";

pkgs/applications/graphics/ipe/default.nix

@@ -3,11 +3,11 @@
 }:
 
 stdenv.mkDerivation rec {
-  name = "ipe-7.2.7";
+  name = "ipe-7.2.9";
 
   src = fetchurl {
     url = "https://dl.bintray.com/otfried/generic/ipe/7.2/${name}-src.tar.gz";
-    sha256 = "08lzqhagvr8l69hxghyw9akf5dixbily7hj2gxhzzrp334k3yvfn";
+    sha256 = "1i0h0q32xvbb0d3y2ff76jxnaw05hjf2z5gzww886z8arxwar1xn";
   };
 
   # changes taken from Gentoo portage
@@ -38,8 +38,6 @@ stdenv.mkDerivation rec {
     done
   '';
 
-  patches = [ ./xlocale.patch ];
-
   #TODO: make .desktop entry
 
   meta = {

pkgs/applications/graphics/ipe/xlocale.patch

@@ -1,10 +0,0 @@
---- ipe-7.2.7/src/ipelib/ipeplatform.cpp     2016-12-09 15:09:04.000000000 +0100
-+++ ipe-7.2.7/src/ipelib/ipeplatform.cpp     2017-11-23 17:13:11.152395834 +0100
-@@ -38,7 +38,6 @@
- #include <gdiplus.h>
- #else
- #include <sys/wait.h>
--#include <xlocale.h>
- #include <dirent.h>
- #endif
- #ifdef __APPLE__

pkgs/applications/misc/urh/default.nix

@@ -3,13 +3,13 @@
 
 python3Packages.buildPythonApplication rec {
   name = "urh-${version}";
-  version = "2.5.3";
+  version = "2.5.4";
 
   src = fetchFromGitHub {
     owner = "jopohl";
     repo = "urh";
     rev = "v${version}";
-    sha256 = "050c7vhxxwvmkahdhwdk371qhfnmass5bs9zxr8yj4mqfnihcmi8";
+    sha256 = "06mz35jnmy6rchsnlk2s81fdwnc7zvx496q4ihjb9qybhyka79ay";
   };
 
   buildInputs = [ hackrf rtl-sdr airspy limesuite ];

pkgs/applications/networking/instant-messengers/discord/default.nix

@@ -1,26 +1,28 @@
-{ stdenv, fetchurl, makeDesktopItem, makeWrapper
+{ stdenv, fetchurl, makeDesktopItem, wrapGAppsHook
-, alsaLib, atk, cairo, cups, dbus, expat, fontconfig, freetype, gdk_pixbuf
+, alsaLib, atk, at-spi2-atk, cairo, cups, dbus, expat, fontconfig, freetype, gdk_pixbuf
-, glib, gnome2, gtk2, libnotify, libX11, libXcomposite, libXcursor, libXdamage
+, glib, gtk3, libnotify, libX11, libXcomposite, libXcursor, libXdamage, libuuid
 , libXext, libXfixes, libXi, libXrandr, libXrender, libXtst, nspr, nss, libxcb
 , pango, systemd, libXScrnSaver, libcxx, libpulseaudio }:
 
 stdenv.mkDerivation rec {
 
     pname = "discord";
-    version = "0.0.5";
+    version = "0.0.8";
     name = "${pname}-${version}";
 
     src = fetchurl {
         url = "https://cdn.discordapp.com/apps/linux/${version}/${pname}-${version}.tar.gz";
-        sha256 = "067gb72qsxrzfma04njkbqbmsvwnnyhw4k9igg5769jkxay68i1g";
+        sha256 = "1p786ma54baljs0bw8nl9sr37ypbpjblcndxsw4djgyxkd9ii16r";
     };
 
-    nativeBuildInputs = [ makeWrapper ];
+    nativeBuildInputs = [ wrapGAppsHook ];
+
+    dontWrapGApps = true;
 
     libPath = stdenv.lib.makeLibraryPath [
         libcxx systemd libpulseaudio
-        stdenv.cc.cc alsaLib atk cairo cups dbus expat fontconfig freetype
+        stdenv.cc.cc alsaLib atk at-spi2-atk cairo cups dbus expat fontconfig freetype
-        gdk_pixbuf glib gnome2.GConf gtk2 libnotify libX11 libXcomposite
+        gdk_pixbuf glib gtk3 libnotify libX11 libXcomposite libuuid
         libXcursor libXdamage libXext libXfixes libXi libXrandr libXrender
         libXtst nspr nss libxcb pango systemd libXScrnSaver
      ];
@@ -29,10 +31,14 @@ stdenv.mkDerivation rec {
         mkdir -p $out/{bin,opt/discord,share/pixmaps}
         mv * $out/opt/discord
 
+        chmod +x $out/opt/discord/Discord
         patchelf --set-interpreter ${stdenv.cc.bintools.dynamicLinker} \
                  $out/opt/discord/Discord
 
-        wrapProgram $out/opt/discord/Discord --prefix LD_LIBRARY_PATH : ${libPath}
+        wrapProgram $out/opt/discord/Discord \
+          "''${gappsWrapperArgs[@]}" \
+          --prefix XDG_DATA_DIRS : "${gtk3}/share/gsettings-schemas/${gtk3.name}/" \
+          --prefix LD_LIBRARY_PATH : ${libPath}
 
         ln -s $out/opt/discord/Discord $out/bin/
         ln -s $out/opt/discord/discord.png $out/share/pixmaps

pkgs/applications/networking/nextcloud-client/default.nix

@@ -1,5 +1,5 @@
 { stdenv, fetchgit, cmake, pkgconfig, qtbase, qtwebkit, qtkeychain, qttools, sqlite
-, inotify-tools, makeWrapper, openssl_1_1, pcre, qtwebengine, libsecret
+, inotify-tools, makeWrapper, openssl_1_1, pcre, qtwebengine, libsecret, fetchpatch
 }:
 
 stdenv.mkDerivation rec {
@@ -13,6 +13,15 @@ stdenv.mkDerivation rec {
     fetchSubmodules = true;
   };
 
+  # Patch contained in next (>2.5.1) release
+  patches = [
+    (fetchpatch {
+     name = "fix-qt-5.12-build";
+     url = "https://github.com/nextcloud/desktop/commit/071709ab5e3366e867dd0b0ea931aa7d6f80f528.patch";
+     sha256 = "14k635jwm8hz6i22lz88jj2db8v5czwa3zg0667i4hwhkqqmy61n";
+     })
+  ];
+
   nativeBuildInputs = [ pkgconfig cmake makeWrapper ];
 
   buildInputs = [ qtbase qtwebkit qtkeychain qttools qtwebengine sqlite openssl_1_1.out pcre inotify-tools ];

pkgs/applications/networking/seafile-client/default.nix

@@ -32,6 +32,6 @@ stdenv.mkDerivation rec {
     description = "Desktop client for Seafile, the Next-generation Open Source Cloud Storage";
     license = licenses.asl20;
     platforms = platforms.linux;
-    maintainers = with maintainers; [ dotlambda ];
+    maintainers = with maintainers; [ ];
   };
 }

pkgs/applications/networking/sniffers/wireshark/default.nix

@@ -12,7 +12,7 @@ assert withQt  -> !withGtk && qt5  != null;
 with stdenv.lib;
 
 let
-  version = "2.6.5";
+  version = "2.6.6";
   variant = if withGtk then "gtk" else if withQt then "qt" else "cli";
 
 in stdenv.mkDerivation {
@@ -21,7 +21,7 @@ in stdenv.mkDerivation {
 
   src = fetchurl {
     url = "https://www.wireshark.org/download/src/all-versions/wireshark-${version}.tar.xz";
-    sha256 = "12j3fw0j8qcr86c1vsz4bsb55j9inp0ll3wjjdvg1cj4hmwmn5ck";
+    sha256 = "0qz8a1ays63712pq1v7nnw7c57zlqkcifq7himfv5nsv0zm36ya8";
   };
 
   cmakeFlags = [

pkgs/applications/office/libreoffice/default-primary-src.nix

@@ -3,7 +3,7 @@
 rec {
   major = "6";
   minor = "1";
-  patch = "3";
+  patch = "4";
   tweak = "2";
 
   subdir = "${major}.${minor}.${patch}";
@@ -12,6 +12,6 @@ rec {
 
   src = fetchurl {
     url = "https://download.documentfoundation.org/libreoffice/src/${subdir}/libreoffice-${version}.tar.xz";
-    sha256 = "0i4gf3qi16fg7dxq2l4vhkwh4f5lx7xd1ilpzcw26vccqkv3hvyl";
+    sha256 = "1zip7clhh3bp9smlxx1y5zpnwhaa6p0xlxg7k5d644q8gqbyk3v4";
   };
 }

pkgs/applications/office/libreoffice/default.nix

@@ -48,14 +48,14 @@ let
 
     translations = fetchSrc {
       name = "translations";
-      sha256 = "1cry3gkvk71jf71jk4pff320axfid2wqjdnhkj2z718g4pp54dwf";
+      sha256 = "1lgyns8zmwky1p78rvilnixqmicpfaal6x6286l4m7hv46pha181";
     };
 
     # TODO: dictionaries
 
     help = fetchSrc {
       name = "help";
-      sha256 = "0q26zb2lq2cnkq0cn9ds3qwa981ljz0lyw13pa6f62nvrnwwqgwa";
+      sha256 = "0ia490xksnhh4m5fas6irr7qbnkaap7zs3fg8jbq4qrfjh81bcpm";
     };
 
   };
@@ -68,7 +68,10 @@ in stdenv.mkDerivation rec {
   # of rasqal/rasqal.h
   NIX_CFLAGS_COMPILE = [ "-I${librdf_rasqal}/include/rasqal" ];
 
-  patches = [ ./xdg-open-brief.patch ];
+  patches = [
+    ./xdg-open-brief.patch
+    ./poppler.patch
+  ];
 
   postUnpack = ''
     mkdir -v $sourceRoot/src

pkgs/applications/office/libreoffice/poppler.patch

@@ -0,0 +1,289 @@
+diff --git a/sdext/source/pdfimport/xpdfwrapper/pdfioutdev_gpl.cxx b/sdext/source/pdfimport/xpdfwrapper/pdfioutdev_gpl.cxx
+index 06e4faead..d4174e208 100644
+--- a/sdext/source/pdfimport/xpdfwrapper/pdfioutdev_gpl.cxx
++++ b/sdext/source/pdfimport/xpdfwrapper/pdfioutdev_gpl.cxx
+@@ -298,7 +298,7 @@ void writePpm_( OutputBuffer&     o_rOutputBuf,
+     o_rOutputBuf.resize(header_size);
+ 
+     // initialize stream
+-    Guchar *p;
++    unsigned char *p;
+     GfxRGB rgb;
+     std::unique_ptr<ImageStream> imgStr(
+         new ImageStream(str,
+@@ -401,7 +401,7 @@ void writeImage_( OutputBuffer&     o_rOutputBuf,
+                 oneColor = { byteToCol( 0xff ), byteToCol( 0xff ), byteToCol( 0xff ) };
+         if( colorMap->getColorSpace()->getMode() == csIndexed || colorMap->getColorSpace()->getMode() == csDeviceGray )
+         {
+-            Guchar nIndex = 0;
++            unsigned char nIndex = 0;
+             colorMap->getRGB( &nIndex, &zeroColor );
+             nIndex = 1;
+             colorMap->getRGB( &nIndex, &oneColor );
+@@ -514,7 +514,7 @@ void PDFOutDev::printPath( GfxPath* pPath )
+ PDFOutDev::PDFOutDev( PDFDoc* pDoc ) :
+     m_pDoc( pDoc ),
+     m_aFontMap(),
+-    m_pUtf8Map( new UnicodeMap("UTF-8", gTrue, &mapUTF8) ),
++    m_pUtf8Map( new UnicodeMap("UTF-8", true, &mapUTF8) ),
+     m_bSkipImages(false)
+ {
+ }
+@@ -555,7 +555,11 @@ void PDFOutDev::processLink(Link* link, Catalog*)
+     LinkAction* pAction = link->getAction();
+     if (pAction && pAction->getKind() == actionURI)
+     {
++#if POPPLER_CHECK_VERSION(0, 72, 0)
++        const char* pURI = static_cast<LinkURI*>(pAction)->getURI()->c_str();
++#else
+         const char* pURI = static_cast<LinkURI*>(pAction)->getURI()->getCString();
++#endif
+ 
+         std::vector<char> aEsc( lcl_escapeLineFeeds(pURI) );
+ 
+@@ -578,7 +582,11 @@ void PDFOutDev::restoreState(GfxState*)
+     printf( "restoreState\n" );
+ }
+ 
++#if POPPLER_CHECK_VERSION(0, 71, 0)
++void PDFOutDev::setDefaultCTM(const double *pMat)
++#else
+ void PDFOutDev::setDefaultCTM(double *pMat)
++#endif
+ {
+     assert(pMat);
+ 
+@@ -752,8 +760,11 @@ void PDFOutDev::updateFont(GfxState *state)
+             printf( " %lld", fontID );
+ 
+             aFont = it->second;
+-
++#if POPPLER_CHECK_VERSION(0, 72, 0)
++            std::vector<char> aEsc( lcl_escapeLineFeeds(aFont.familyName.c_str()) );
++#else
+             std::vector<char> aEsc( lcl_escapeLineFeeds(aFont.familyName.getCString()) );
++#endif
+             printf( " %d %d %d %d %f %d %s",
+                     aFont.isEmbedded,
+                     aFont.isBold,
+@@ -939,11 +950,11 @@ void PDFOutDev::endTextObject(GfxState*)
+ }
+ 
+ void PDFOutDev::drawImageMask(GfxState* pState, Object*, Stream* str,
+-                              int width, int height, GBool invert,
++                              int width, int height, poppler_bool invert,
+ #if POPPLER_CHECK_VERSION(0, 12, 0)
+-                              GBool /*interpolate*/,
++                              poppler_bool /*interpolate*/,
+ #endif
+-                              GBool /*inlineImg*/ )
++                              poppler_bool /*inlineImg*/ )
+ {
+     if (m_bSkipImages)
+         return;
+@@ -972,9 +983,9 @@ void PDFOutDev::drawImageMask(GfxState* pState, Object*, Stream* str,
+ void PDFOutDev::drawImage(GfxState*, Object*, Stream* str,
+                           int width, int height, GfxImageColorMap* colorMap,
+ #if POPPLER_CHECK_VERSION(0, 12, 0)
+-                          GBool /*interpolate*/,
++                          poppler_bool /*interpolate*/,
+ #endif
+-                          int* maskColors, GBool /*inlineImg*/ )
++                          int* maskColors, poppler_bool /*inlineImg*/ )
+ {
+     if (m_bSkipImages)
+         return;
+@@ -1023,13 +1034,13 @@ void PDFOutDev::drawMaskedImage(GfxState*, Object*, Stream* str,
+                                 int width, int height,
+                                 GfxImageColorMap* colorMap,
+ #if POPPLER_CHECK_VERSION(0, 12, 0)
+-                                GBool /*interpolate*/,
++                                poppler_bool /*interpolate*/,
+ #endif
+                                 Stream* maskStr,
+                                 int maskWidth, int maskHeight,
+-                                GBool maskInvert
++                                poppler_bool maskInvert
+ #if POPPLER_CHECK_VERSION(0, 12, 0)
+-                                , GBool /*maskInterpolate*/
++                                , poppler_bool /*maskInterpolate*/
+ #endif
+                                )
+ {
+@@ -1045,13 +1056,13 @@ void PDFOutDev::drawSoftMaskedImage(GfxState*, Object*, Stream* str,
+                                     int width, int height,
+                                     GfxImageColorMap* colorMap,
+ #if POPPLER_CHECK_VERSION(0, 12, 0)
+-                                    GBool /*interpolate*/,
++                                    poppler_bool /*interpolate*/,
+ #endif
+                                     Stream* maskStr,
+                                     int maskWidth, int maskHeight,
+                                     GfxImageColorMap* maskColorMap
+ #if POPPLER_CHECK_VERSION(0, 12, 0)
+-                                    , GBool /*maskInterpolate*/
++                                    , poppler_bool /*maskInterpolate*/
+ #endif
+                                    )
+ {
+diff --git a/sdext/source/pdfimport/xpdfwrapper/pdfioutdev_gpl.hxx b/sdext/source/pdfimport/xpdfwrapper/pdfioutdev_gpl.hxx
+index 7e65f085d..4b5c14d15 100644
+--- a/sdext/source/pdfimport/xpdfwrapper/pdfioutdev_gpl.hxx
++++ b/sdext/source/pdfimport/xpdfwrapper/pdfioutdev_gpl.hxx
+@@ -129,6 +129,12 @@ namespace pdfi
+         GooString & getFamilyName() const
+         { return const_cast<GooString &>(familyName); }
+     };
++    // Versions before 0.15 defined GBool as int; 0.15 redefined it as bool; 0.71 dropped GBool
++#if POPPLER_VERSION_MAJOR == 0 && POPPLER_VERSION_MINOR < 71
++typedef GBool poppler_bool;
++#else
++typedef bool poppler_bool;
++#endif
+ 
+     class PDFOutDev : public OutputDev
+     {
+@@ -151,22 +157,26 @@ namespace pdfi
+ 
+         // Does this device use upside-down coordinates?
+         // (Upside-down means (0,0) is the top left corner of the page.)
+-        virtual GBool upsideDown() override { return gTrue; }
++        virtual poppler_bool upsideDown() override { return true; }
+ 
+         // Does this device use drawChar() or drawString()?
+-        virtual GBool useDrawChar() override { return gTrue; }
++        virtual poppler_bool useDrawChar() override { return true; }
+ 
+         // Does this device use beginType3Char/endType3Char?  Otherwise,
+         // text in Type 3 fonts will be drawn with drawChar/drawString.
+-        virtual GBool interpretType3Chars() override { return gFalse; }
++        virtual poppler_bool interpretType3Chars() override { return false; }
+ 
+         // Does this device need non-text content?
+-        virtual GBool needNonText() override { return gTrue; }
++        virtual poppler_bool needNonText() override { return true; }
+ 
+         //----- initialization and control
+ 
+         // Set default transform matrix.
++#if POPPLER_CHECK_VERSION(0, 71, 0)
++        virtual void setDefaultCTM(const double *ctm) override;
++#else
+         virtual void setDefaultCTM(double *ctm) override;
++#endif
+ 
+         // Start a page.
+         virtual void startPage(int pageNum, GfxState *state
+@@ -233,40 +243,40 @@ namespace pdfi
+ 
+         //----- image drawing
+         virtual void drawImageMask(GfxState *state, Object *ref, Stream *str,
+-                                   int width, int height, GBool invert,
++                                   int width, int height, poppler_bool invert,
+ #if POPPLER_CHECK_VERSION(0, 12, 0)
+-                                   GBool interpolate,
++                                   poppler_bool interpolate,
+ #endif
+-                                   GBool inlineImg) override;
++                                   poppler_bool inlineImg) override;
+         virtual void drawImage(GfxState *state, Object *ref, Stream *str,
+                                int width, int height, GfxImageColorMap *colorMap,
+ #if POPPLER_CHECK_VERSION(0, 12, 0)
+-                               GBool interpolate,
++                               poppler_bool interpolate,
+ #endif
+-                               int *maskColors, GBool inlineImg) override;
++                               int *maskColors, poppler_bool inlineImg) override;
+         virtual void drawMaskedImage(GfxState *state, Object *ref, Stream *str,
+                                      int width, int height,
+                                      GfxImageColorMap *colorMap,
+ #if POPPLER_CHECK_VERSION(0, 12, 0)
+-                                     GBool interpolate,
++                                     poppler_bool interpolate,
+ #endif
+                                      Stream *maskStr, int maskWidth, int maskHeight,
+-                                     GBool maskInvert
++                                     poppler_bool maskInvert
+ #if POPPLER_CHECK_VERSION(0, 12, 0)
+-                                     , GBool maskInterpolate
++                                     , poppler_bool maskInterpolate
+ #endif
+                                     ) override;
+         virtual void drawSoftMaskedImage(GfxState *state, Object *ref, Stream *str,
+                                          int width, int height,
+                                          GfxImageColorMap *colorMap,
+ #if POPPLER_CHECK_VERSION(0, 12, 0)
+-                                         GBool interpolate,
++                                         poppler_bool interpolate,
+ #endif
+                                          Stream *maskStr,
+                                          int maskWidth, int maskHeight,
+                                          GfxImageColorMap *maskColorMap
+ #if POPPLER_CHECK_VERSION(0, 12, 0)
+-                                         , GBool maskInterpolate
++                                         , poppler_bool maskInterpolate
+ #endif
+                                         ) override;
+ 
+@@ -279,7 +289,7 @@ extern FILE* g_binary_out;
+ 
+ // note: if you ever change Output_t, please keep in mind that the current code
+ // relies on it being of 8 bit size
+-typedef Guchar Output_t;
++typedef unsigned char Output_t;
+ typedef std::vector< Output_t > OutputBuffer;
+ 
+ #endif // INCLUDED_SDEXT_SOURCE_PDFIMPORT_XPDFWRAPPER_PDFIOUTDEV_GPL_HXX
+diff --git a/sdext/source/pdfimport/xpdfwrapper/pnghelper.cxx b/sdext/source/pdfimport/xpdfwrapper/pnghelper.cxx
+index 44f30c0ba..66c175165 100644
+--- a/sdext/source/pdfimport/xpdfwrapper/pnghelper.cxx
++++ b/sdext/source/pdfimport/xpdfwrapper/pnghelper.cxx
+@@ -242,7 +242,7 @@ void PngHelper::createPng( OutputBuffer& o_rOutputBuf,
+     appendIHDR( o_rOutputBuf, width, height, 8, 6 ); // RGBA image
+ 
+     // initialize stream
+-    Guchar *p, *pm;
++    unsigned char *p, *pm;
+     GfxRGB rgb;
+     GfxGray alpha;
+     ImageStream* imgStr =
+@@ -328,7 +328,7 @@ void PngHelper::createPng( OutputBuffer& o_rOutputBuf,
+     appendIHDR( o_rOutputBuf, width, height, 8, 6 ); // RGBA image
+ 
+     // initialize stream
+-    Guchar *p;
++    unsigned char *p;
+     GfxRGB rgb;
+     ImageStream* imgStr =
+         new ImageStream(str,
+@@ -374,7 +374,7 @@ void PngHelper::createPng( OutputBuffer& o_rOutputBuf,
+     {
+         for( int x = 0; x < maskWidth; ++x )
+         {
+-            Guchar aPixel = 0;
++            unsigned char aPixel = 0;
+             imgStrMask->getPixel( &aPixel );
+             int nIndex = (y*height/maskHeight) * (width*4+1) + // mapped line
+                          (x*width/maskWidth)*4 + 1  + 3        // mapped column
+diff --git a/sdext/source/pdfimport/xpdfwrapper/wrapper_gpl.cxx b/sdext/source/pdfimport/xpdfwrapper/wrapper_gpl.cxx
+index 16db05afe..cd559cab0 100644
+--- a/sdext/source/pdfimport/xpdfwrapper/wrapper_gpl.cxx
++++ b/sdext/source/pdfimport/xpdfwrapper/wrapper_gpl.cxx
+@@ -69,7 +69,7 @@ int main(int argc, char **argv)
+ 
+     // read config file
+     globalParams = new GlobalParams();
+-    globalParams->setErrQuiet(gTrue);
++    globalParams->setErrQuiet(true);
+ #if defined(_MSC_VER)
+     globalParams->setupBaseFonts(nullptr);
+ #endif
+@@ -143,7 +143,7 @@ int main(int argc, char **argv)
+                 i,
+                 PDFI_OUTDEV_RESOLUTION,
+                 PDFI_OUTDEV_RESOLUTION,
+-                0, gTrue, gTrue, gTrue);
++                0, true, true, true);
+         rDoc.processLinks(&aOutDev, i);
+     }
+ 

pkgs/applications/office/scribus/unstable.nix

@@ -4,16 +4,16 @@ podofo, poppler, poppler_data, python2, harfbuzz, qtimageformats, qttools }:
 
 let
   pythonEnv = python2.withPackages(ps: [ps.tkinter ps.pillow]);
-  revision = "22730";
+  revision = "22806";
 in 
 stdenv.mkDerivation rec {
   name = "scribus-unstable-${version}";
-  version = "2018-10-13";
+  version = "2019-01-16";
 
   src = fetchsvn {
     url = "svn://scribus.net/trunk/Scribus";
     rev = revision;
-    sha256 = "1nlg4qva0fach8fi07r1pakjjlijishpwzlgpnxyaz7r31yjaw63";
+    sha256 = "16xpsbp6kca78jf48n6zdmyjras38xr11paan839hgy4ik83ncn0";
   };
 
   enableParallelBuilding = true;

pkgs/applications/science/math/sage/sage-src.nix

@@ -96,6 +96,14 @@ stdenv.mkDerivation rec {
       rev = "db10d327ade93711da735a599a67580524e6f7b4";
       sha256 = "09v87id25fa5r9snfn4mv79syhc77jxfawj5aizmdpwdmpgxjk1f";
     })
+
+    # https://trac.sagemath.org/ticket/26442
+    (fetchSageDiff {
+      name = "cypari2-2.0.3.patch";
+      base = "8.6.rc1";
+      rev = "cd62d45bcef93fb4f7ed62609a46135e6de07051";
+      sha256 = "08l2b9w0rn1zrha6188j72f7737xs126gkgmydjd31baa6367np2";
+    })
   ];
 
   patches = nixPatches ++ packageUpgradePatches;

pkgs/applications/version-management/git-repo/default.nix

@@ -4,13 +4,13 @@
 
 stdenv.mkDerivation rec {
   name = "git-repo-${version}";
-  version = "1.13.1";
+  version = "1.13.2";
 
   src = fetchFromGitHub {
     owner = "android";
     repo = "tools_repo";
     rev = "v${version}";
-    sha256 = "09p0xv8x7mkmibri7rcl1k4dwh2gj3c7dipkrwrsir6hrwsispd1";
+    sha256 = "0ll1yzwgpayps7c05j8kf1m4zvww7crmlyy7xa0w5g2krbjvjzvi";
   };
 
   nativeBuildInputs = [ makeWrapper ];

pkgs/applications/version-management/gitea/default.nix

@@ -7,13 +7,13 @@ with stdenv.lib;
 
 buildGoPackage rec {
   name = "gitea-${version}";
-  version = "1.6.3";
+  version = "1.6.4";
 
   src = fetchFromGitHub {
     owner = "go-gitea";
     repo = "gitea";
     rev = "v${version}";
-    sha256 = "02d37mh1qxsq9lc9ylk5sgdlc1cgwh6fri077crk43mnyb5lhj3j";
+    sha256 = "09h8nbzsxm34rlfnvbsf4cs02igids806927xpxf7g563cdapcnl";
     # Required to generate the same checksum on MacOS due to unicode encoding differences
     # More information: https://github.com/NixOS/nixpkgs/pull/48128
     extraPostFetch = ''

pkgs/applications/version-management/gitolite/default.nix

@@ -2,20 +2,20 @@
 
 stdenv.mkDerivation rec {
   name = "gitolite-${version}";
-  version = "3.6.10";
+  version = "3.6.11";
 
   src = fetchFromGitHub {
     owner = "sitaramc";
     repo = "gitolite";
     rev = "v${version}";
-    sha256 = "0p2697mn6rwm03ndlv7q137zczai82n41aplq1g006ii7f12xy8h";
+    sha256 = "1rkj7gknwjlc5ij9w39zf5mr647bm45la57yjczydmvrb8c56yrh";
   };
 
   buildInputs = [ git nettools perl ];
 
   dontBuild = true;
 
-  patchPhase = ''
+  postPatch = ''
     substituteInPlace ./install --replace " 2>/dev/null" ""
     substituteInPlace src/lib/Gitolite/Hooks/PostUpdate.pm \
       --replace /usr/bin/perl "${perl}/bin/perl"

pkgs/applications/version-management/subversion/default.nix

@@ -127,8 +127,8 @@ in {
   };
 
   subversion_1_11 = common {
-    version = "1.11.0";
+    version = "1.11.1";
-    sha256 = "0miyz3xsxxp56iczxv6yqd8p06av3vxpb5nasyg2xb3ln1247i47";
+    sha256 = "1fv0psjxx5nxb4zmddyrma2bnv1bfff4p8ii6j8fqwjdr982gzcy";
     extraBuildInputs = [ lz4 utf8proc ];
   };
 }

pkgs/applications/video/vlc/default.nix

@@ -21,11 +21,11 @@ assert (withQt5 -> qtbase != null && qtsvg != null && qtx11extras != null);
 
 stdenv.mkDerivation rec {
   name = "vlc-${version}";
-  version = "3.0.5";
+  version = "3.0.6";
 
   src = fetchurl {
     url = "http://get.videolan.org/vlc/${version}/${name}.tar.xz";
-    sha256 = "1nvj00khy08sing0mdnw6virmiq579mrk5rvpx9710nlxggqgh7m";
+    sha256 = "1lvyyahv6g9zv7m5g5qinyrwmw47zdsd5ysimb862j7kw15nvh8q";
   };
 
   # VLC uses a *ton* of libraries for various pieces of functionality, many of

pkgs/applications/virtualization/xen/acpica-utils-20180427.patch

@@ -0,0 +1,63 @@
+From 858dbaaeda33b05c1ac80aea0ba9a03924e09005 Mon Sep 17 00:00:00 2001
+From: =?utf8?q?Roger=20Pau=20Monn=C3=A9?= <roger.pau@citrix.com>
+Date: Wed, 9 May 2018 11:08:12 +0100
+Subject: [PATCH] libacpi: fixes for iasl >= 20180427
+MIME-Version: 1.0
+Content-Type: text/plain; charset=utf8
+Content-Transfer-Encoding: 8bit
+
+New versions of iasl have introduced improved C file generation, as
+reported in the changelog:
+
+iASL: Enhanced the -tc option (which creates an AML hex file in C,
+suitable for import into a firmware project):
+  1) Create a unique name for the table, to simplify use of multiple
+SSDTs.
+  2) Add a protection #ifdef in the file, similar to a .h header file.
+
+The net effect of that on generated files is:
+
+-unsigned char AmlCode[] =
++#ifndef __SSDT_S4_HEX__
++#define __SSDT_S4_HEX__
++
++unsigned char ssdt_s4_aml_code[] =
+
+The above example is from ssdt_s4.asl.
+
+Fix the build with newer versions of iasl by stripping the '_aml_code'
+suffix from the variable name on generated files.
+
+Signed-off-by: Roger Pau Monné <roger.pau@citrix.com>
+Reviewed-by: Wei Liu <wei.liu2@citrix.com>
+Acked-by: Andrew Cooper <andrew.cooper3@citrix.com>
+Release-acked-by: Juergen Gross <jgross@suse.com>
+---
+ tools/libacpi/Makefile | 4 ++--
+ 1 file changed, 2 insertions(+), 2 deletions(-)
+
+diff --git a/tools/libacpi/Makefile b/tools/libacpi/Makefile
+index a47a658a25..c17f3924cc 100644
+--- a/tools/libacpi/Makefile
++++ b/tools/libacpi/Makefile
+@@ -43,7 +43,7 @@ all: $(C_SRC) $(H_SRC)
+ 
+ $(H_SRC): $(ACPI_BUILD_DIR)/%.h: %.asl iasl
+ 	iasl -vs -p $(ACPI_BUILD_DIR)/$*.$(TMP_SUFFIX) -tc $<
+-	sed -e 's/AmlCode/$*/g' $(ACPI_BUILD_DIR)/$*.hex >$@
++	sed -e 's/AmlCode/$*/g' -e 's/_aml_code//g' $(ACPI_BUILD_DIR)/$*.hex >$@
+ 	rm -f $(addprefix $(ACPI_BUILD_DIR)/, $*.aml $*.hex)
+  
+ $(MK_DSDT): mk_dsdt.c
+@@ -76,7 +76,7 @@ $(ACPI_BUILD_DIR)/dsdt_anycpu_arm.asl: $(MK_DSDT)
+ 
+ $(C_SRC): $(ACPI_BUILD_DIR)/%.c: iasl $(ACPI_BUILD_DIR)/%.asl
+ 	iasl -vs -p $(ACPI_BUILD_DIR)/$*.$(TMP_SUFFIX) -tc $(ACPI_BUILD_DIR)/$*.asl
+-	sed -e 's/AmlCode/$*/g' $(ACPI_BUILD_DIR)/$*.hex > $@.$(TMP_SUFFIX)
++	sed -e 's/AmlCode/$*/g' -e 's/_aml_code//g' $(ACPI_BUILD_DIR)/$*.hex > $@.$(TMP_SUFFIX)
+ 	echo "int $*_len=sizeof($*);" >> $@.$(TMP_SUFFIX)
+ 	mv -f $@.$(TMP_SUFFIX) $@
+ 	rm -f $(addprefix $(ACPI_BUILD_DIR)/, $*.aml $*.hex)
+-- 
+2.11.0
+

pkgs/applications/virtualization/xen/generic.nix

@@ -120,7 +120,8 @@ stdenv.mkDerivation (rec {
   '';
 
   patches = [ ./0000-fix-ipxe-src.patch
-              ./0000-fix-install-python.patch ]
+              ./0000-fix-install-python.patch
+              ./acpica-utils-20180427.patch]
          ++ (config.patches or []);
 
   postPatch = ''

pkgs/applications/window-managers/way-cooler/default.nix

@@ -6,21 +6,30 @@ let
   # refer to
   # https://github.com/way-cooler/way-cooler.github.io/blob/master/way-cooler-release-i3-default.sh
   # for version numbers
+  cratesIO = callPackage ./crates-io.nix {};
+
   fakegit = writeShellScriptBin "git" ''
     echo ""
   '';
-  way-cooler = (((callPackage ./way-cooler.nix {}).way_cooler { builtin-lua = true; }).override {
+  # https://nest.pijul.com/pmeunier/carnix/discussions/22
+  version = "0.8.1";
+  deps = (callPackage ./way-cooler.nix {}).deps;
+  way_cooler_ = f: cratesIO.crates.way_cooler."${version}" deps {
+    features = cratesIO.features_.way_cooler."${version}" deps {
+      "way_cooler"."${version}" = f;
+    };
+  };
+  way-cooler = ((way_cooler_ { builtin-lua = true; }).override {
     crateOverrides = defaultCrateOverrides // {
 
     way-cooler = attrs: { buildInputs = [ wlc cairo libxkbcommon fakegit gdk_pixbuf wayland ]; };
   };}).overrideAttrs (oldAttrs: rec {
-    nativeBuildInputs = [ makeWrapper ];
-
     postBuild = ''
       mkdir -p $out/etc
       cp -r config $out/etc/way-cooler
     '';
   });
+
   wc-bg = ((callPackage ./wc-bg.nix {}).wc_bg {}).overrideAttrs (oldAttrs: rec {
     nativeBuildInputs = [ makeWrapper ];
 
@@ -29,8 +38,9 @@ let
         --prefix LD_LIBRARY_PATH : "${stdenv.lib.makeLibraryPath [ wayland ]}"
     '';
   });
-  wc-grab = ((callPackage ./wc-grab.nix {}).wc_grab {}).overrideAttrs (oldAttrs: rec {
+
-  });
+  wc-grab = (callPackage ./wc-grab.nix {}).wc_grab {};
+
   wc-lock = (((callPackage ./wc-lock.nix {}).wc_lock {}).override {
     crateOverrides = defaultCrateOverrides // {
 
@@ -43,6 +53,7 @@ let
         --prefix LD_LIBRARY_PATH : "${stdenv.lib.makeLibraryPath [ libxkbcommon wayland ]}"
     '';
   });
+
   # https://github.com/way-cooler/way-cooler/issues/446
   wc-bar-bare = stdenv.mkDerivation {
     name = "wc-bar-bare-2017-12-05";
@@ -75,7 +86,7 @@ let
     ${wc-bar-bare}/bin/bar.py $SELECTED $BACKGROUND $SELECTED_OTHER_WORKSPACE 2> /tmp/bar_debug.txt | ${lemonbar}/bin/lemonbar -B $BACKGROUND -F "#FFF" -n "lemonbar" -p -d
   '';
 in symlinkJoin rec {
-  version = "0.8.0";
+  inherit version;
   name = "way-cooler-with-extensions-${version}";
   paths = [ way-cooler wc-bg wc-grab wc-lock wc-bar ];
 
@@ -94,6 +105,7 @@ in symlinkJoin rec {
     homepage = http://way-cooler.org/;
     license = with licenses; [ mit ];
     maintainers = [ maintainers.miltador ];
+    broken = stdenv.hostPlatform.isAarch64; # fails to build wc-bg (on aarch64)
     platforms = platforms.all;
   };
 }

pkgs/build-support/rust/crates-io.nix

@@ -4,7 +4,6 @@ let inherit (lib.lists) fold;
     inherit (lib.attrsets) recursiveUpdate;
 in
 rec {
-
 # aho-corasick-0.6.8
 
   crates.aho_corasick."0.6.8" = deps: { features?(features_.aho_corasick."0.6.8" deps {}) }: buildRustCrate {
@@ -1456,6 +1455,38 @@ rec {
   }) [];
 
 
+# end
+# serde-1.0.84
+
+  crates.serde."1.0.84" = deps: { features?(features_.serde."1.0.84" deps {}) }: buildRustCrate {
+    crateName = "serde";
+    version = "1.0.84";
+    authors = [ "Erick Tryzelaar <erick.tryzelaar@gmail.com>" "David Tolnay <dtolnay@gmail.com>" ];
+    sha256 = "1x40cvvkbkz592jflwbfbxhim3wxdqp9dy0qxjw13ra7q57b29gy";
+    build = "build.rs";
+    dependencies = mapFeatures features ([
+]);
+    features = mkFeatures (features."serde"."1.0.84" or {});
+  };
+  features_.serde."1.0.84" = deps: f: updateFeatures f (rec {
+    serde = fold recursiveUpdate {} [
+      { "1.0.84".default = (f.serde."1.0.84".default or true); }
+      { "1.0.84".serde_derive =
+        (f.serde."1.0.84".serde_derive or false) ||
+        (f.serde."1.0.84".derive or false) ||
+        (serde."1.0.84"."derive" or false); }
+      { "1.0.84".std =
+        (f.serde."1.0.84".std or false) ||
+        (f.serde."1.0.84".default or false) ||
+        (serde."1.0.84"."default" or false); }
+      { "1.0.84".unstable =
+        (f.serde."1.0.84".unstable or false) ||
+        (f.serde."1.0.84".alloc or false) ||
+        (serde."1.0.84"."alloc" or false); }
+    ];
+  }) [];
+
+
 # end
 # serde_derive-1.0.80
 
@@ -1744,6 +1775,26 @@ rec {
   ];
 
 
+# end
+# toml-0.4.10
+
+  crates.toml."0.4.10" = deps: { features?(features_.toml."0.4.10" deps {}) }: buildRustCrate {
+    crateName = "toml";
+    version = "0.4.10";
+    authors = [ "Alex Crichton <alex@alexcrichton.com>" ];
+    sha256 = "0fs4kxl86w3kmgwcgcv23nk79zagayz1spg281r83w0ywf88d6f1";
+    dependencies = mapFeatures features ([
+      (crates."serde"."${deps."toml"."0.4.10"."serde"}" deps)
+    ]);
+  };
+  features_.toml."0.4.10" = deps: f: updateFeatures f (rec {
+    serde."${deps.toml."0.4.10".serde}".default = true;
+    toml."0.4.10".default = (f.toml."0.4.10".default or true);
+  }) [
+    (features_.serde."${deps."toml"."0.4.10"."serde"}" deps)
+  ];
+
+
 # end
 # toml-0.4.8
 
@@ -1764,6 +1815,26 @@ rec {
   ];
 
 
+# end
+# toml2nix-0.1.1
+
+  crates.toml2nix."0.1.1" = deps: { features?(features_.toml2nix."0.1.1" deps {}) }: buildRustCrate {
+    crateName = "toml2nix";
+    version = "0.1.1";
+    authors = [ "Pierre-Étienne Meunier <pierre-etienne.meunier@inria.fr>" ];
+    sha256 = "167qyylp0s76h7r0n99as3jwry5mrn5q1wxh2sdwh51d5qnnw6b2";
+    dependencies = mapFeatures features ([
+      (crates."toml"."${deps."toml2nix"."0.1.1"."toml"}" deps)
+    ]);
+  };
+  features_.toml2nix."0.1.1" = deps: f: updateFeatures f (rec {
+    toml."${deps.toml2nix."0.1.1".toml}".default = true;
+    toml2nix."0.1.1".default = (f.toml2nix."0.1.1".default or true);
+  }) [
+    (features_.toml."${deps."toml2nix"."0.1.1"."toml"}" deps)
+  ];
+
+
 # end
 # ucd-util-0.1.1
 

pkgs/data/fonts/source-sans-pro/default.nix

@@ -1,18 +1,18 @@
 { stdenv, fetchzip }:
 
 fetchzip {
-  name = "source-sans-pro-2.040";
+  name = "source-sans-pro-2.045";
 
-  url = "https://github.com/adobe-fonts/source-sans-pro/releases/download/2.040R-ro%2F1.090R-it/source-sans-pro-2.040R-ro-1.090R-it.zip";
+  url = https://github.com/adobe-fonts/source-sans-pro/releases/download/2.045R-ro%2F1.095R-it/source-sans-pro-2.045R-ro-1.095R-it.zip;
 
   postFetch = ''
-    mkdir -p $out/share/fonts/opentype $out/share/fonts/truetype $out/share/fonts/variable
+    mkdir -p $out/share/fonts/{opentype,truetype,variable}
     unzip -j $downloadedFile "*/OTF/*.otf" -d $out/share/fonts/opentype
     unzip -j $downloadedFile "*/TTF/*.ttf" -d $out/share/fonts/truetype
     unzip -j $downloadedFile "*/VAR/*.otf" -d $out/share/fonts/variable
   '';
 
-  sha256 = "1n7z9xpxls74xxjsa61df1ln86y063m07w1f4sbxpjaa0frim4pp";
+  sha256 = "0xjdp226ybdcfylbpfsdgnz2bf4pj4qv1wfs6fv22hjxlzqfixf3";
 
   meta = with stdenv.lib; {
     homepage = https://sourceforge.net/adobe/sourcesans;

pkgs/data/icons/papirus-icon-theme/default.nix

@@ -2,13 +2,13 @@
 
 stdenv.mkDerivation rec {
   name = "papirus-icon-theme-${version}";
-  version = "20181120";
+  version = "20190106";
 
   src = fetchFromGitHub {
     owner = "PapirusDevelopmentTeam";
     repo = "papirus-icon-theme";
     rev = version;
-    sha256 = "1v0vb7l948gxyz37vzh01jqmb8d3w3hxw85vly08ra1ldixaczc5";
+    sha256 = "0i5dmpqq65nipps800iijxd6krnvrdbnd6zrf7f145dg7r6hfk8p";
   };
 
   nativeBuildInputs = [ gtk3 ];

pkgs/data/themes/shades-of-gray/default.nix

@@ -2,13 +2,13 @@
 
 stdenv.mkDerivation rec {
   name = "shades-of-gray-theme-${version}";
-  version = "1.1.3";
+  version = "1.1.4";
 
   src = fetchFromGitHub {
     owner = "WernerFP";
     repo = "Shades-of-gray-theme";
     rev = version;
-    sha256 = "14p1s1pmzqnn9j9vwqfxfd4i045p356a6d9rwzzs0gx3c6ibqx3a";
+    sha256 = "1i5mra1ib3c8xqnhwjh8yzjcdnhvqdmccw5x52sfh9xq797px39l";
   };
 
   buildInputs = [ gtk_engines ];

pkgs/development/compilers/dtc/default.nix

@@ -2,23 +2,18 @@
 
 stdenv.mkDerivation rec {
   name = "dtc-${version}";
-  version = "1.4.5";
+  version = "1.4.7";
 
   src = fetchgit {
     url = "https://git.kernel.org/pub/scm/utils/dtc/dtc.git";
     rev = "refs/tags/v${version}";
-    sha256 = "10y5pbkcj5gkijcgnlvrh6q2prpnvsgihb9asz3zfp66mcjwzsy3";
+    sha256 = "0l787g1wmd4d6izsp91m5r2qms2h2jg2hhzllfi9qkbnplyz21wn";
   };
 
   nativeBuildInputs = [ flex bison pkgconfig swig which ];
   buildInputs = [ python2 ];
 
   patches = [
-    # Fix 32-bit build
-    (fetchpatch {
-      url = "https://git.kernel.org/pub/scm/utils/dtc/dtc.git/patch/?id=497432fd2131967f349e69dc5d259072151cc4b4";
-      sha256 = "1hrvhvz0qkck53mhacrc4rxjrvp34d8dkw7xb5lr4gpg32grvkpq";
-    })
     # Fix setup.py
     (fetchpatch {
       url = "https://github.com/dezgeg/dtc/commit/d94a745148ba5c9198143ccc0f7d877fe498ab73.patch";

pkgs/development/compilers/iasl/default.nix

@@ -2,11 +2,11 @@
 
 stdenv.mkDerivation rec {
   name = "iasl-${version}";
-  version = "20180313";
+  version = "20181213";
 
   src = fetchurl {
     url = "https://acpica.org/sites/acpica/files/acpica-unix-${version}.tar.gz";
-    sha256 = "05ab2xfv9wqwbzjaa9xqgrvvan87rxv29hw48h1gcckpc5smp2wm";
+    sha256 = "1vgqlv9pvxc52faxixpgz7hi1awqmj88bw5vqn3bldf6fmkh147w";
   };
 
   NIX_CFLAGS_COMPILE = "-O3";

pkgs/development/compilers/oraclejdk/jdk-linux-base.nix

@@ -1,15 +1,15 @@
 { productVersion
 , patchVersion
-, downloadUrl
+, buildVersion
 , sha256
 , jceName
-, jceDownloadUrl
+, releaseToken
 , sha256JCE
 }:
 
 { swingSupport ? true
 , stdenv
-, requireFile
+, fetchurl
 , makeWrapper
 , unzip
 , file
@@ -17,6 +17,7 @@
 , installjdk ? true
 , pluginSupport ? true
 , installjce ? false
+, licenseAccepted ? false
 , glib
 , libxml2
 , libav_0_8
@@ -36,6 +37,13 @@
 
 assert swingSupport -> xorg != null;
 
+if !licenseAccepted then throw ''
+    You must accept the Oracle Binary Code License Agreement for Java SE at
+    https://www.oracle.com/technetwork/java/javase/terms/license/index.html
+    by setting nixpkgs config option 'oraclejdk.accept_license = true;'
+  ''
+else assert licenseAccepted;
+
 let
 
   /**
@@ -50,10 +58,10 @@ let
 
   jce =
     if installjce then
-      requireFile {
+      fetchurl {
-        name = jceName;
+        url = "http://download.oracle.com/otn-pub/java/jce/${productVersion}/${jceName}";
-        url = jceDownloadUrl;
         sha256 = sha256JCE;
+        curlOpts = "-b oraclelicense=a";
       }
     else
       "";
@@ -67,19 +75,23 @@ let
 
 in
 
+assert sha256 ? ${stdenv.hostPlatform.system};
+
 let result = stdenv.mkDerivation rec {
   name =
     if installjdk then "oraclejdk-${productVersion}u${patchVersion}" else "oraclejre-${productVersion}u${patchVersion}";
 
-  src = requireFile {
+  src = let
-    name = {
+    platformName = {
-      i686-linux    = "jdk-${productVersion}u${patchVersion}-linux-i586.tar.gz";
+      i686-linux    = "linux-i586";
-      x86_64-linux  = "jdk-${productVersion}u${patchVersion}-linux-x64.tar.gz";
+      x86_64-linux  = "linux-x64";
-      armv7l-linux  = "jdk-${productVersion}u${patchVersion}-linux-arm32-vfp-hflt.tar.gz";
+      armv7l-linux  = "linux-arm32-vfp-hflt";
-      aarch64-linux = "jdk-${productVersion}u${patchVersion}-linux-arm64-vfp-hflt.tar.gz";
+      aarch64-linux = "linux-arm64-vfp-hflt";
     }.${stdenv.hostPlatform.system};
-    url = downloadUrl;
+  in fetchurl {
-    sha256 = sha256.${stdenv.hostPlatform.system};
+   url = "http://download.oracle.com/otn-pub/java/jdk/${productVersion}u${patchVersion}-b${buildVersion}/${releaseToken}/jdk-${productVersion}u${patchVersion}-${platformName}.tar.gz";
+   curlOpts = "-b oraclelicense=a";
+   sha256 = sha256.${stdenv.hostPlatform.system};
   };
 
   nativeBuildInputs = [ file ]

pkgs/development/compilers/oraclejdk/jdk8cpu-linux.nix

@@ -1,12 +1,14 @@
+# http://www.oracle.com/technetwork/java/javase/downloads/jdk8-downloads-2133151.html;
+# jce download url: http://www.oracle.com/technetwork/java/javase/downloads/jce8-download-2133166.html;
 import ./jdk-linux-base.nix {
   productVersion = "8";
-  patchVersion = "191";
+  patchVersion = "201";
-  downloadUrl = http://www.oracle.com/technetwork/java/javase/downloads/jdk8-downloads-2133151.html;
+  buildVersion = "09";
-  sha256.i686-linux = "1dmnv3x28l0rdi92gpmcp38gpy3lf4pl441bijvjhi7j97kk60v4";
+  sha256.i686-linux = "1f9n93zmkggchaxkchp4bqasvxznn96zjci34f52h7v392jkzqac";
-  sha256.x86_64-linux = "0r8dvb0hahfybvf9wiv7904rn22n93bfc9x6pgypynj0w83rbhjk";
+  sha256.x86_64-linux = "0w730v2q0iaxf2lprabwmy7129byrs0hhdbwas575p1xmk00qw6b";
-  sha256.armv7l-linux = "0wgdr9ainzc2yc5qp6ncflnsdygpgrmv2af522djkc83skp5g70v";
+  sha256.armv7l-linux = "0p82d2vah63a6r2rip9v17lbjam39kgqp0584q3cnljgr5p9gyhz";
-  sha256.aarch64-linux = "1rgwf0i9ikcjqbxkvr4x94y62m1kklfdhgqscxil479d5mg6akqz";
+  sha256.aarch64-linux = "1qm4b3aj5wi0hp9q6gy1da4bz5k9ky4shgiqa4zxrib4kjp9yf0k";
+  releaseToken = "42970487e3af4f5aa5bca3f542482c60";
   jceName = "jce_policy-8.zip";
-  jceDownloadUrl = http://www.oracle.com/technetwork/java/javase/downloads/jce8-download-2133166.html;
   sha256JCE = "0n8b6b8qmwb14lllk2lk1q1ahd3za9fnjigz5xn65mpg48whl0pk";
 }

pkgs/development/compilers/oraclejdk/jdk8psu-linux.nix

@@ -1,12 +1,14 @@
+# http://www.oracle.com/technetwork/java/javase/downloads/jdk8-downloads-2133151.html;
+# jce download url: http://www.oracle.com/technetwork/java/javase/downloads/jce8-download-2133166.html;
 import ./jdk-linux-base.nix {
   productVersion = "8";
-  patchVersion = "191";
+  patchVersion = "201";
-  downloadUrl = http://www.oracle.com/technetwork/java/javase/downloads/jdk8-downloads-2133151.html;
+  buildVersion = "09";
-  sha256.i686-linux = "1dmnv3x28l0rdi92gpmcp38gpy3lf4pl441bijvjhi7j97kk60v4";
+  sha256.i686-linux = "1f9n93zmkggchaxkchp4bqasvxznn96zjci34f52h7v392jkzqac";
-  sha256.x86_64-linux = "0r8dvb0hahfybvf9wiv7904rn22n93bfc9x6pgypynj0w83rbhjk";
+  sha256.x86_64-linux = "0w730v2q0iaxf2lprabwmy7129byrs0hhdbwas575p1xmk00qw6b";
-  sha256.armv7l-linux = "0wgdr9ainzc2yc5qp6ncflnsdygpgrmv2af522djkc83skp5g70v";
+  sha256.armv7l-linux = "0p82d2vah63a6r2rip9v17lbjam39kgqp0584q3cnljgr5p9gyhz";
-  sha256.aarch64-linux = "1rgwf0i9ikcjqbxkvr4x94y62m1kklfdhgqscxil479d5mg6akqz";
+  sha256.aarch64-linux = "1qm4b3aj5wi0hp9q6gy1da4bz5k9ky4shgiqa4zxrib4kjp9yf0k";
+  releaseToken = "42970487e3af4f5aa5bca3f542482c60";
   jceName = "jce_policy-8.zip";
-  jceDownloadUrl = http://www.oracle.com/technetwork/java/javase/downloads/jce8-download-2133166.html;
   sha256JCE = "0n8b6b8qmwb14lllk2lk1q1ahd3za9fnjigz5xn65mpg48whl0pk";
 }

pkgs/development/interpreters/duktape/default.nix

@@ -23,8 +23,8 @@ stdenv.mkDerivation rec {
 
   meta = with stdenv.lib; {
     description = "An embeddable Javascript engine, with a focus on portability and compact footprint";
-    homepage = "http://duktape.org/";
+    homepage = https://duktape.org/;
-    downloadPage = "http://duktape.org/download.html";
+    downloadPage = https://duktape.org/download.html;
     license = licenses.mit;
     maintainers = [ maintainers.fgaz ];
     platforms = platforms.linux;

pkgs/development/interpreters/python/pypy/default.nix

@@ -1,7 +1,7 @@
 { stdenv, substituteAll, fetchurl
 , zlib ? null, zlibSupport ? true, bzip2, pkgconfig, libffi
 , sqlite, openssl, ncurses, python, expat, tcl, tk, tix, xlibsWrapper, libX11
-, makeWrapper, callPackage, self, gdbm, db, lzma
+, callPackage, self, gdbm, db, lzma
 , python-setup-hook
 # For the Python package set
 , packageOverrides ? (self: super: {})
@@ -37,7 +37,7 @@ in with passthru; stdenv.mkDerivation rec {
     inherit sha256;
   };
 
-  nativeBuildInputs = [ pkgconfig makeWrapper ];
+  nativeBuildInputs = [ pkgconfig ];
   buildInputs = [
     bzip2 openssl pythonForPypy libffi ncurses expat sqlite tk tcl xlibsWrapper libX11 gdbm db
   ]  ++ optionals isPy3k [
@@ -128,15 +128,6 @@ in with passthru; stdenv.mkDerivation rec {
     ln -s $out/${executable}/include $out/include/${libPrefix}
     ln -s $out/${executable}-c/lib-python/${if isPy3k then "3" else pythonVersion} $out/lib/${libPrefix}
 
-    # We must wrap the original, not the symlink.
-    # PyPy uses argv[0] to find its standard library, and while it knows
-    # how to follow symlinks, it doesn't know about wrappers. So, it
-    # will think the wrapper is the original. As long as the wrapper has
-    # the same path as the original, this is OK.
-    wrapProgram "$out/${executable}-c/${executable}-c" \
-      --set LD_LIBRARY_PATH "${LD_LIBRARY_PATH}:$out/lib" \
-      --set LIBRARY_PATH "${LIBRARY_PATH}:$out/lib"
-
     # verify cffi modules
     $out/bin/${executable} -c ${if isPy3k then "'import tkinter;import sqlite3;import curses;import lzma'" else "'import Tkinter;import sqlite3;import curses'"}
 
@@ -149,7 +140,7 @@ in with passthru; stdenv.mkDerivation rec {
 
   meta = with stdenv.lib; {
     homepage = http://pypy.org/;
-    description = "Fast, compliant alternative implementation of the Python language (3.5.3)";
+    description = "Fast, compliant alternative implementation of the Python language (${pythonVersion})";
     license = licenses.mit;
     platforms = [ "i686-linux" "x86_64-linux" ];
     maintainers = with maintainers; [ andersk ];

pkgs/development/interpreters/python/pypy/prebuilt.nix

@@ -115,7 +115,7 @@ in with passthru; stdenv.mkDerivation {
 
   meta = with stdenv.lib; {
     homepage = http://pypy.org/;
-    description = "Fast, compliant alternative implementation of the Python language (3.5.3)";
+    description = "Fast, compliant alternative implementation of the Python language (${pythonVersion})";
     license = licenses.mit;
     platforms = [ "x86_64-linux" ];
   };

pkgs/development/libraries/flatpak/default.nix

@@ -5,14 +5,14 @@
 
 stdenv.mkDerivation rec {
   pname = "flatpak";
-  version = "1.1.2";
+  version = "1.1.3";
 
   # TODO: split out lib once we figure out what to do with triggerdir
   outputs = [ "out" "man" "doc" "installedTests" ];
 
   src = fetchurl {
     url = "https://github.com/flatpak/flatpak/releases/download/${version}/${pname}-${version}.tar.xz";
-    sha256 = "01z7ybskxh6r58yh1m98z0z36fba4ljaxpqmh4y6kkaw8pyhhs6i";
+    sha256 = "12xqhszx50pmw2nx7n1pym7n47z95ddwwkyx35bfgmxsd9hjpmh2";
   };
 
   patches = [
@@ -36,7 +36,7 @@ stdenv.mkDerivation rec {
   ];
 
   buildInputs = [
-    bubblewrap bzip2 dbus glib gpgme json-glib libarchive libcap libseccomp
+    bubblewrap bzip2 dbus gnome3.dconf glib gpgme json-glib libarchive libcap libseccomp
     libsoup lzma ostree polkit python3 systemd xorg.libXau
     gnome3.gsettings-desktop-schemas glib-networking
   ];

pkgs/development/libraries/libsearpc/default.nix

@@ -26,6 +26,6 @@ stdenv.mkDerivation rec {
     description = "A simple and easy-to-use C language RPC framework (including both server side & client side) based on GObject System";
     license = licenses.lgpl3;
     platforms = platforms.linux;
-    maintainers = with maintainers; [ dotlambda ];
+    maintainers = with maintainers; [ ];
   };
 }

pkgs/development/libraries/openfst/default.nix

@@ -19,7 +19,7 @@ stdenv.mkDerivation rec {
     homepage = http://www.openfst.org/twiki/bin/view/FST/WebHome;
     license = stdenv.lib.licenses.asl20;
     maintainers = [ stdenv.lib.maintainers.dfordivam ];
-    platforms = stdenv.lib.platforms.linux;
+    platforms = stdenv.lib.platforms.unix;
   };
 }
 

pkgs/development/libraries/qpdf/default.nix

@@ -1,13 +1,13 @@
 { stdenv, fetchurl, fetchpatch, libjpeg, zlib, perl }:
 
-let version = "8.2.1";
+let version = "8.3.0";
 in
 stdenv.mkDerivation rec {
   name = "qpdf-${version}";
 
   src = fetchurl {
     url = "mirror://sourceforge/qpdf/qpdf/${version}/${name}.tar.gz";
-    sha256 = "1jdb0jj72fjdp6xip4m7yz31r5x13zs7h4smnxsycgw3vbmx6igl";
+    sha256 = "1xwiqf6xkl9glpardak97ycy5f2bwjf8x0hwvf0acsxqj03a3hj6";
   };
 
   nativeBuildInputs = [ perl ];

pkgs/development/libraries/qtstyleplugin-kvantum/default.nix

@@ -1,20 +1,20 @@
 { stdenv, fetchFromGitHub, qmake, qtbase, qtsvg, qtx11extras, libX11, libXext, qttools }:
 
 stdenv.mkDerivation rec {
-  name = "qtstyleplugin-kvantum-${version}";
+  pname = "qtstyleplugin-kvantum";
-  version = "0.10.6";
+  version = "0.10.8";
 
   src = fetchFromGitHub {
     owner = "tsujan";
     repo = "Kvantum";
-    rev = "a6daa1a6df3c5d4abc7ea39ef7028ddea2addbf6";
+    rev = "V${version}";
-    sha256 = "1zns4x95h0ydiwx8yw0bmyg4lc2sy7annmdrg66sx753x3177zxp";
+    sha256 = "0w4iqpkagrwvhahdl280ni06b7x1i621n3z740g84ysp2n3dv09l";
   };
 
   nativeBuildInputs = [ qmake qttools ];
   buildInputs = [ qtbase qtsvg qtx11extras libX11 libXext  ];
 
-  postUnpack = "sourceRoot=\${sourceRoot}/Kvantum";
+  sourceRoot = "source/Kvantum";
 
   postPatch = ''
     # Fix plugin dir

pkgs/development/libraries/xdg-dbus-proxy/default.nix

@@ -1,18 +1,24 @@
-{ stdenv, fetchurl, pkgconfig, glib }:
+{ stdenv, fetchurl, pkgconfig, libxslt, docbook_xsl, docbook_xml_dtd_43, dbus, glib }:
 
-let
+stdenv.mkDerivation rec {
-  version = "0.1.0";
+  pname = "xdg-dbus-proxy";
-in stdenv.mkDerivation rec {
+  version = "0.1.1";
-  name = "xdg-dbus-proxy-${version}";
 
   src = fetchurl {
-    url = "https://github.com/flatpak/xdg-dbus-proxy/releases/download/${version}/${name}.tar.xz";
+    url = "https://github.com/flatpak/xdg-dbus-proxy/releases/download/${version}/${pname}-${version}.tar.xz";
-    sha256 = "055wli36lvdannp6qqwbvd78353n61wn9kp8y3dchh39wq7x7vwy";
+    sha256 = "1w8yg5j51zsr9d97d4jjp9dvd7iq893p2xk54i6lf3lx01ribdqh";
   };
 
-  nativeBuildInputs = [ pkgconfig ];
+  nativeBuildInputs = [ pkgconfig libxslt docbook_xsl docbook_xml_dtd_43 ];
-
   buildInputs = [ glib ];
+  checkInputs = [ dbus ];
+
+  configureFlags = [
+    "--enable-man"
+  ];
+
+  # dbus[2345]: Failed to start message bus: Failed to open "/etc/dbus-1/session.conf": No such file or directory
+  doCheck = false;
 
   meta = with stdenv.lib; {
     description = "DBus proxy for Flatpak and others";

pkgs/development/node-packages/node-packages-v10.json

@@ -19,6 +19,7 @@
 , "dhcp"
 , "dnschain"
 , "elasticdump"
+, "elm-live"
 , "elm-oracle"
 , "elm-test"
 , "emoj"

pkgs/development/node-packages/node-packages-v6.nix

@@ -13,13 +13,13 @@ let
         sha512 = "nne9/IiQ/hzIhY6pdDnbBtz7DjPTKrY00P/zvPSm5pOFkl6xuGrGnXn/VtTNNfNtAfZ9/1RtehkszU9qcTii0Q==";
       };
     };
-    "ajv-6.6.1" = {
+    "ajv-6.7.0" = {
       name = "ajv";
       packageName = "ajv";
-      version = "6.6.1";
+      version = "6.7.0";
       src = fetchurl {
-        url = "https://registry.npmjs.org/ajv/-/ajv-6.6.1.tgz";
+        url = "https://registry.npmjs.org/ajv/-/ajv-6.7.0.tgz";
-        sha512 = "ZoJjft5B+EJBjUyu9C9Hc0OZyPZSSlOF+plzouTrg6UlA8f+e/n8NIgBFG/9tppJtpPWfthHakK7juJdNDODww==";
+        sha512 = "RZXPviBTtfmtka9n9sy1N5M5b82CbxWIR6HIis4s3WQTXDJamc/0gpCWNGz6EWdWp4DOfjzJfhz/AS9zVPjjWg==";
       };
     };
     "ansi-regex-2.1.1" = {
@@ -535,22 +535,22 @@ let
         sha1 = "9326b1488c22d1a6088650a86901b2d9a90a2cbc";
       };
     };
-    "fined-1.1.0" = {
+    "fined-1.1.1" = {
       name = "fined";
       packageName = "fined";
-      version = "1.1.0";
+      version = "1.1.1";
       src = fetchurl {
-        url = "https://registry.npmjs.org/fined/-/fined-1.1.0.tgz";
+        url = "https://registry.npmjs.org/fined/-/fined-1.1.1.tgz";
-        sha1 = "b37dc844b76a2f5e7081e884f7c0ae344f153476";
+        sha512 = "jQp949ZmEbiYHk3gkbdtpJ0G1+kgtLQBNdP5edFP7Fh+WAYceLQz6yO1SBj72Xkg8GVyTB3bBzAYrHJVh5Xd5g==";
       };
     };
-    "flagged-respawn-1.0.0" = {
+    "flagged-respawn-1.0.1" = {
       name = "flagged-respawn";
       packageName = "flagged-respawn";
-      version = "1.0.0";
+      version = "1.0.1";
       src = fetchurl {
-        url = "https://registry.npmjs.org/flagged-respawn/-/flagged-respawn-1.0.0.tgz";
+        url = "https://registry.npmjs.org/flagged-respawn/-/flagged-respawn-1.0.1.tgz";
-        sha1 = "4e79ae9b2eb38bf86b3bb56bf3e0a56aa5fcabd7";
+        sha512 = "lNaHNVymajmk0OJMBn8fVUAU1BtDeKIqKoVhk4xAALB57aALg6b4W0MfJ/cUE0g9YBXy5XhSlPIpYIJ7HaY/3Q==";
       };
     };
     "for-in-1.0.2" = {
@@ -1206,7 +1206,7 @@ let
       packageName = "minimist";
       version = "0.0.8";
       src = fetchurl {
-        url = "http://registry.npmjs.org/minimist/-/minimist-0.0.8.tgz";
+        url = "https://registry.npmjs.org/minimist/-/minimist-0.0.8.tgz";
         sha1 = "857fcabfc3397d2625b8228262e86aa7a011b05d";
       };
     };
@@ -1215,7 +1215,7 @@ let
       packageName = "minimist";
       version = "1.2.0";
       src = fetchurl {
-        url = "http://registry.npmjs.org/minimist/-/minimist-1.2.0.tgz";
+        url = "https://registry.npmjs.org/minimist/-/minimist-1.2.0.tgz";
         sha1 = "a35008b20f41383eec1fb914f4cd5df79a264284";
       };
     };
@@ -1251,7 +1251,7 @@ let
       packageName = "mkdirp";
       version = "0.5.1";
       src = fetchurl {
-        url = "http://registry.npmjs.org/mkdirp/-/mkdirp-0.5.1.tgz";
+        url = "https://registry.npmjs.org/mkdirp/-/mkdirp-0.5.1.tgz";
         sha1 = "30057438eac6cf7f8c4767f38648d6697d75c903";
       };
     };
@@ -1309,13 +1309,13 @@ let
         sha512 = "m/e6jgWu8/v5niCUKQi9qQl8QdeEduFA96xHDDzFGqly0OOjI7c+60KM/2sppfnUU9JJagf+zs+yGhqSOFj71g==";
       };
     };
-    "npm-packlist-1.1.12" = {
+    "npm-packlist-1.2.0" = {
       name = "npm-packlist";
       packageName = "npm-packlist";
-      version = "1.1.12";
+      version = "1.2.0";
       src = fetchurl {
-        url = "https://registry.npmjs.org/npm-packlist/-/npm-packlist-1.1.12.tgz";
+        url = "https://registry.npmjs.org/npm-packlist/-/npm-packlist-1.2.0.tgz";
-        sha512 = "WJKFOVMeAlsU/pjXuqVdzU0WfgtIBCupkEVwn+1Y0ERAbUfWw8R4GjgVbaKnUjRoD2FoQbHOCbOyT5Mbs9Lw4g==";
+        sha512 = "7Mni4Z8Xkx0/oegoqlcao/JpPCPEMtUvsmB0q7mgvlMinykJLSRTYuFqoQLYgGY8biuxIeiHO+QNJKbCfljewQ==";
       };
     };
     "npmlog-4.1.2" = {
@@ -1413,7 +1413,7 @@ let
       packageName = "os-homedir";
       version = "1.0.2";
       src = fetchurl {
-        url = "http://registry.npmjs.org/os-homedir/-/os-homedir-1.0.2.tgz";
+        url = "https://registry.npmjs.org/os-homedir/-/os-homedir-1.0.2.tgz";
         sha1 = "ffbc4988336e0e833de0c168c7ef152121aa7fb3";
       };
     };
@@ -1422,7 +1422,7 @@ let
       packageName = "os-tmpdir";
       version = "1.0.2";
       src = fetchurl {
-        url = "http://registry.npmjs.org/os-tmpdir/-/os-tmpdir-1.0.2.tgz";
+        url = "https://registry.npmjs.org/os-tmpdir/-/os-tmpdir-1.0.2.tgz";
         sha1 = "bbe67406c79aa85c5cfec766fe5734555dfa1274";
       };
     };
@@ -1467,7 +1467,7 @@ let
       packageName = "path-is-absolute";
       version = "1.0.1";
       src = fetchurl {
-        url = "http://registry.npmjs.org/path-is-absolute/-/path-is-absolute-1.0.1.tgz";
+        url = "https://registry.npmjs.org/path-is-absolute/-/path-is-absolute-1.0.1.tgz";
         sha1 = "174b9268735534ffbc7ace6bf53a5a9e1b5c5f5f";
       };
     };
@@ -1525,13 +1525,13 @@ let
         sha512 = "MtEC1TqN0EU5nephaJ4rAtThHtC86dNN9qCuEhtshvpVBkAW5ZO7BASN9REnF9eoXGcRub+pFuKEpOHE+HbEMw==";
       };
     };
-    "psl-1.1.29" = {
+    "psl-1.1.31" = {
       name = "psl";
       packageName = "psl";
-      version = "1.1.29";
+      version = "1.1.31";
       src = fetchurl {
-        url = "https://registry.npmjs.org/psl/-/psl-1.1.29.tgz";
+        url = "https://registry.npmjs.org/psl/-/psl-1.1.31.tgz";
-        sha512 = "AeUmQ0oLN02flVHXWh9sSJF7mcdFq0ppid/JkErufc3hGIV/AMa8Fo9VgDo/cT2jFdOWoFvHp90qqBH54W+gjQ==";
+        sha512 = "/6pt4+C+T+wZUieKR620OpzN/LlnNKuWjy1iFLQ/UG35JqHlR/89MP1d96dUfkf6Dne3TuLQzOYEYshJ+Hx8mw==";
       };
     };
     "punycode-1.4.1" = {
@@ -1575,7 +1575,7 @@ let
       packageName = "readable-stream";
       version = "2.3.6";
       src = fetchurl {
-        url = "http://registry.npmjs.org/readable-stream/-/readable-stream-2.3.6.tgz";
+        url = "https://registry.npmjs.org/readable-stream/-/readable-stream-2.3.6.tgz";
         sha512 = "tQtKA9WIAhBF3+VLAseyMqZeBjW0AHJoxOtYqSUZNJxauErmLbVm2FW1y+J/YA9dUrAC39ITejlZWhVIwawkKw==";
       };
     };
@@ -1624,13 +1624,13 @@ let
         sha512 = "NAqBSrijGLZdM0WZNsInLJpkJokL72XYjUpnB0iwsRgxh7dB6COrHnTBNwN0E+lHDAJzu7kLAkDeY08z2/A0hg==";
       };
     };
-    "resolve-1.8.1" = {
+    "resolve-1.9.0" = {
       name = "resolve";
       packageName = "resolve";
-      version = "1.8.1";
+      version = "1.9.0";
       src = fetchurl {
-        url = "https://registry.npmjs.org/resolve/-/resolve-1.8.1.tgz";
+        url = "https://registry.npmjs.org/resolve/-/resolve-1.9.0.tgz";
-        sha512 = "AicPrAC7Qu1JxPCZ9ZgCZlY35QgFnNqc+0LtbRNxnVw4TXvjQ72wnuL9JQcEBgXkI9JM8MsT9kaQoHcpCRJOYA==";
+        sha512 = "TZNye00tI67lwYvzxCxHGjwTNlUV70io54/Ed4j6PscB8xVfuBJpRenI/o6dVk0cY0PYTY27AgCoGGxRnYuItQ==";
       };
     };
     "resolve-dir-1.0.1" = {
@@ -1660,13 +1660,13 @@ let
         sha512 = "TTlYpa+OL+vMMNG24xSlQGEJ3B/RzEfUlLct7b5G/ytav+wPrplCpVMFuwzXbkecJrb6IYo1iFb0S9v37754mg==";
       };
     };
-    "rimraf-2.6.2" = {
+    "rimraf-2.6.3" = {
       name = "rimraf";
       packageName = "rimraf";
-      version = "2.6.2";
+      version = "2.6.3";
       src = fetchurl {
-        url = "https://registry.npmjs.org/rimraf/-/rimraf-2.6.2.tgz";
+        url = "https://registry.npmjs.org/rimraf/-/rimraf-2.6.3.tgz";
-        sha512 = "lreewLK/BlghmxtfH36YYVg1i8IAce4TI7oao75I1g245+6BctqTVQiBP3YUJ9C6DQOXJmkYR9X9fCLtCOJc5w==";
+        sha512 = "mwqeW5XsA2qAejG46gYdENaxXjx9onRNCfn7L0duuP4hCuTIi/QO7PDK07KJfp1d+izWPrzEJDcSqBa0OZQriA==";
       };
     };
     "safe-buffer-5.1.2" = {
@@ -1683,7 +1683,7 @@ let
       packageName = "safe-regex";
       version = "1.1.0";
       src = fetchurl {
-        url = "http://registry.npmjs.org/safe-regex/-/safe-regex-1.1.0.tgz";
+        url = "https://registry.npmjs.org/safe-regex/-/safe-regex-1.1.0.tgz";
         sha1 = "40a3669f3b077d1e943d44629e157dd48023bf2e";
       };
     };
@@ -1710,7 +1710,7 @@ let
       packageName = "semver";
       version = "5.3.0";
       src = fetchurl {
-        url = "http://registry.npmjs.org/semver/-/semver-5.3.0.tgz";
+        url = "https://registry.npmjs.org/semver/-/semver-5.3.0.tgz";
         sha1 = "9b2ce5d3de02d17c6012ad326aa6b4d0cf54f94f";
       };
     };
@@ -1822,13 +1822,13 @@ let
         sha512 = "NzNVhJDYpwceVVii8/Hu6DKfD2G+NrQHlS/V/qgv763EYudVwEcMQNxd2lh+0VrUByXN/oJkl5grOhYWvQUYiw==";
       };
     };
-    "sshpk-1.15.2" = {
+    "sshpk-1.16.0" = {
       name = "sshpk";
       packageName = "sshpk";
-      version = "1.15.2";
+      version = "1.16.0";
       src = fetchurl {
-        url = "https://registry.npmjs.org/sshpk/-/sshpk-1.15.2.tgz";
+        url = "https://registry.npmjs.org/sshpk/-/sshpk-1.16.0.tgz";
-        sha512 = "Ra/OXQtuh0/enyl4ETZAfTaeksa6BXks5ZcjpSUNrjBr0DvrJKX+1fsKDPpT9TBXgHAFsa4510aNVgI8g/+SzA==";
+        sha512 = "Zhev35/y7hRMcID/upReIvRse+I9SVhyVre/KTJSJQWMz3C3+G+HpO7m1wK/yckEtujKZ7dS4hkVxAnmHaIGVQ==";
       };
     };
     "static-extend-0.1.2" = {
@@ -1854,7 +1854,7 @@ let
       packageName = "string_decoder";
       version = "1.1.1";
       src = fetchurl {
-        url = "http://registry.npmjs.org/string_decoder/-/string_decoder-1.1.1.tgz";
+        url = "https://registry.npmjs.org/string_decoder/-/string_decoder-1.1.1.tgz";
         sha512 = "n/ShnvDi6FHbbVfviro+WojiFzv+s8MPMHBczVePfUpDJLwoLT0ht1l4YwBCbi8pJAveEEdnkHyPyTP/mzRfwg==";
       };
     };
@@ -1863,7 +1863,7 @@ let
       packageName = "strip-ansi";
       version = "3.0.1";
       src = fetchurl {
-        url = "http://registry.npmjs.org/strip-ansi/-/strip-ansi-3.0.1.tgz";
+        url = "https://registry.npmjs.org/strip-ansi/-/strip-ansi-3.0.1.tgz";
         sha1 = "6a385fb8853d952d5ff05d0e8aaf94278dc63dcf";
       };
     };
@@ -1881,7 +1881,7 @@ let
       packageName = "tar";
       version = "2.2.1";
       src = fetchurl {
-        url = "http://registry.npmjs.org/tar/-/tar-2.2.1.tgz";
+        url = "https://registry.npmjs.org/tar/-/tar-2.2.1.tgz";
         sha1 = "8e4d2a256c0e2185c6b18ad694aec968b83cb1d1";
       };
     };
@@ -2020,13 +2020,13 @@ let
         sha512 = "yXJmeNaw3DnnKAOKJE51sL/ZaYfWJRl1pK9dr19YFCu0ObS231AB1/LbqTKRAQ5kw8A90rA6fr4riOUpTZvQZA==";
       };
     };
-    "v8flags-3.1.1" = {
+    "v8flags-3.1.2" = {
       name = "v8flags";
       packageName = "v8flags";
-      version = "3.1.1";
+      version = "3.1.2";
       src = fetchurl {
-        url = "https://registry.npmjs.org/v8flags/-/v8flags-3.1.1.tgz";
+        url = "https://registry.npmjs.org/v8flags/-/v8flags-3.1.2.tgz";
-        sha512 = "iw/1ViSEaff8NJ3HLyEjawk/8hjJib3E7pvG4pddVXfUg1983s3VGsiClDjhK64MQVDGqc1Q8r18S4VKQZS9EQ==";
+        sha512 = "MtivA7GF24yMPte9Rp/BWGCYQNaUj86zeYxV/x2RRJMKagImbbv3u8iJC57lNhWLPcGLJmHcHmFWkNsplbbLWw==";
       };
     };
     "verror-1.10.0" = {
@@ -2082,7 +2082,7 @@ in
     packageName = "bower";
     version = "1.8.4";
     src = fetchurl {
-      url = "http://registry.npmjs.org/bower/-/bower-1.8.4.tgz";
+      url = "https://registry.npmjs.org/bower/-/bower-1.8.4.tgz";
       sha1 = "e7876a076deb8137f7d06525dc5e8c66db82f28a";
     };
     buildInputs = globalBuildInputs;
@@ -2201,8 +2201,8 @@ in
         ];
       })
       sources."findup-sync-2.0.0"
-      sources."fined-1.1.0"
+      sources."fined-1.1.1"
-      sources."flagged-respawn-1.0.0"
+      sources."flagged-respawn-1.0.1"
       sources."for-in-1.0.2"
       sources."for-own-1.0.0"
       sources."fragment-cache-0.2.1"
@@ -2284,7 +2284,7 @@ in
       sources."regex-not-1.0.2"
       sources."repeat-element-1.1.3"
       sources."repeat-string-1.6.1"
-      sources."resolve-1.8.1"
+      sources."resolve-1.9.0"
       sources."resolve-dir-1.0.1"
       sources."resolve-url-0.2.1"
       sources."ret-0.1.15"
@@ -2369,7 +2369,7 @@ in
       })
       sources."urix-0.1.0"
       sources."use-3.1.1"
-      sources."v8flags-3.1.1"
+      sources."v8flags-3.1.2"
       sources."which-1.3.1"
     ];
     buildInputs = globalBuildInputs;
@@ -2391,7 +2391,7 @@ in
     };
     dependencies = [
       sources."abbrev-1.1.1"
-      sources."ajv-6.6.1"
+      sources."ajv-6.7.0"
       sources."ansi-regex-2.1.1"
       sources."aproba-1.2.0"
       sources."are-we-there-yet-1.1.5"
@@ -2459,18 +2459,18 @@ in
       sources."path-is-absolute-1.0.1"
       sources."performance-now-2.1.0"
       sources."process-nextick-args-2.0.0"
-      sources."psl-1.1.29"
+      sources."psl-1.1.31"
       sources."punycode-2.1.1"
       sources."qs-6.5.2"
       sources."readable-stream-2.3.6"
       sources."request-2.88.0"
-      sources."rimraf-2.6.2"
+      sources."rimraf-2.6.3"
       sources."safe-buffer-5.1.2"
       sources."safer-buffer-2.1.2"
       sources."semver-5.3.0"
       sources."set-blocking-2.0.0"
       sources."signal-exit-3.0.2"
-      sources."sshpk-1.15.2"
+      sources."sshpk-1.16.0"
       sources."string-width-1.0.2"
       sources."string_decoder-1.1.1"
       sources."strip-ansi-3.0.1"
@@ -2502,10 +2502,10 @@ in
   node-gyp-build = nodeEnv.buildNodePackage {
     name = "node-gyp-build";
     packageName = "node-gyp-build";
-    version = "3.5.1";
+    version = "3.7.0";
     src = fetchurl {
-      url = "https://registry.npmjs.org/node-gyp-build/-/node-gyp-build-3.5.1.tgz";
+      url = "https://registry.npmjs.org/node-gyp-build/-/node-gyp-build-3.7.0.tgz";
-      sha512 = "AKJ4SyHiYvqwy5P9GaAnxi5IG3HSEPHV/1YDMlBA0vEEmi7qxeeSfKlCAau3XFvAPFR9EV6gvD9p2b0s8ghyww==";
+      sha512 = "L/Eg02Epx6Si2NXmedx+Okg+4UHqmaf3TNcxd50SF9NQGcJaON3AtU++kax69XV7YWz4tUspqZSAsVofhFKG2w==";
     };
     buildInputs = globalBuildInputs;
     meta = {
@@ -2561,7 +2561,7 @@ in
       sources."needle-2.2.4"
       sources."nopt-4.0.1"
       sources."npm-bundled-1.0.5"
-      sources."npm-packlist-1.1.12"
+      sources."npm-packlist-1.2.0"
       sources."npmlog-4.1.2"
       sources."number-is-nan-1.0.1"
       sources."object-assign-4.1.1"
@@ -2577,7 +2577,7 @@ in
         ];
       })
       sources."readable-stream-2.3.6"
-      sources."rimraf-2.6.2"
+      sources."rimraf-2.6.3"
       sources."safe-buffer-5.1.2"
       sources."safer-buffer-2.1.2"
       sources."sax-1.2.4"
@@ -2606,10 +2606,10 @@ in
   pnpm = nodeEnv.buildNodePackage {
     name = "pnpm";
     packageName = "pnpm";
-    version = "2.21.1";
+    version = "2.25.1";
     src = fetchurl {
-      url = "https://registry.npmjs.org/pnpm/-/pnpm-2.21.1.tgz";
+      url = "https://registry.npmjs.org/pnpm/-/pnpm-2.25.1.tgz";
-      sha512 = "0UEIdUM8VqRHolaBPREYhTEuu/Zfi4qp3Kp0u6ioCtn7Yi33sGFdApEczb/SenmaqtnWD7OUIO74v8Aw9wnYeg==";
+      sha512 = "VlDIaWSEQJuIQOFzhcg4YQ7enQMrJHb11eUclMj1VxIOxCZX51e/EDu+PZ0IO/4iQsgifiVoQcBbacBKi55jDA==";
     };
     buildInputs = globalBuildInputs;
     meta = {

pkgs/development/ocaml-modules/cmdliner/default.nix

@@ -6,13 +6,23 @@ in
 
 assert stdenv.lib.versionAtLeast ocaml.version "4.01.0";
 
+let param =
+  if stdenv.lib.versionAtLeast ocaml.version "4.03" then {
+    version = "1.0.3";
+    sha256 = "0g3w4hvc1cx9x2yp5aqn6m2rl8lf9x1dn754hfq8m1sc1102lxna";
+  } else {
+    version = "1.0.2";
+    sha256 = "18jqphjiifljlh9jg8zpl6310p3iwyaqphdkmf89acyaix0s4kj1";
+  }
+; in
+
 stdenv.mkDerivation rec {
-  name = "ocaml-${pname}-${version}";
+  name = "ocaml${ocaml.version}-${pname}-${version}";
-  version = "1.0.3";
+  inherit (param) version;
 
   src = fetchurl {
     url = "http://erratique.ch/software/${pname}/releases/${pname}-${version}.tbz";
-    sha256 = "0g3w4hvc1cx9x2yp5aqn6m2rl8lf9x1dn754hfq8m1sc1102lxna";
+    inherit (param) sha256;
   };
 
   nativeBuildInputs = [ ocamlbuild topkg ];

pkgs/development/python-modules/astropy/default.nix

@@ -7,7 +7,7 @@
 
 buildPythonPackage rec {
   pname = "astropy";
-  version = "3.1";
+  version = "3.1.1";
 
   disabled = !isPy3k; # according to setup.py
 
@@ -15,7 +15,7 @@ buildPythonPackage rec {
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1ldmdwfp0g8293k4gyp962nv7ik4zw83p1khkq8jqkzmk7qf040y";
+    sha256 = "0fzm2q922qi68ns5biy807dzmgz1i9gqdh73lcafs0gfk8zyc9v5";
   };
 
   propagatedBuildInputs = [ pytest numpy ]; # yes it really has pytest in install_requires

pkgs/development/python-modules/bokeh/default.nix

@@ -33,11 +33,11 @@
 
 buildPythonPackage rec {
   pname = "bokeh";
-  version = "1.0.2";
+  version = "1.0.3";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "07rczl2xkkqzpm45m0rlb2hki48b6w1k912gmwacf5aisnc0a0rw";
+    sha256 = "1s0gi4n8bn0ain3k6jz6xzbbpn1jpb7rkadmsri8dkcpwyfhacvs";
   };
 
   disabled = isPyPy;

pkgs/development/python-modules/boto3/default.nix

@@ -13,11 +13,11 @@
 
 buildPythonPackage rec {
   pname =  "boto3";
-  version = "1.9.62"; # N.B: if you change this, change botocore too
+  version = "1.9.75"; # N.B: if you change this, change botocore too
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0rf3ik4bqr0qab2648rcaahycr2sih257ngz8brizyfln0lk1sg9";
+    sha256 = "0l4ifnp7mnf8n7dpf5jf5gwcxccb4qrijqyf3izbz2pdlrv1pw73";
   };
 
   propagatedBuildInputs = [ botocore jmespath s3transfer ] ++ lib.optionals (!isPy3k) [ futures ];

pkgs/development/python-modules/botocore/default.nix

@@ -12,11 +12,11 @@
 
 buildPythonPackage rec {
   pname = "botocore";
-  version = "1.12.62"; # N.B: if you change this, change boto3 and awscli to a matching version
+  version = "1.12.79"; # N.B: if you change this, change boto3 and awscli to a matching version
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0zgq3cldrh1x65s3vy1mhp1h5nnsdxw7ig1v0di7p8yns3iazsv7";
+    sha256 = "16ikl3lv9q4i8bwzvm11a5q3bds42p36i4ap01fm3r9w1kzxb1wd";
   };
 
   propagatedBuildInputs = [

pkgs/development/python-modules/cypari2/default.nix

@@ -11,11 +11,11 @@
 buildPythonPackage rec {
   pname = "cypari2";
   # upgrade may break sage, please test the sage build or ping @timokau on upgrade
-  version = "1.3.1";
+  version = "2.0.3";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "04f00xp8aaz37v00iqg1mv5wjq00a5qhk8cqa93s13009s9x984r";
+    sha256 = "0mghbmilmy34xp1d50xdx76sijqxmpkm2bcgx2v1mdji2ff7n0yc";
   };
 
   # This differs slightly from the default python installPhase in that it pip-installs

pkgs/development/python-modules/detox/default.nix

@@ -3,11 +3,11 @@
 
 buildPythonPackage rec {
   pname = "detox";
-  version = "0.15";
+  version = "0.18";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "accde1a79b621df9dfd55b97460e80743a771a3d9a1acd900489a4355f0cc8c7";
+    sha256 = "1yvfhnkw6zpm11yrl2shl794yi68jcfqj8m5n596gqxxbiq6gp90";
   };
 
   buildInputs = [ pytest ];

pkgs/development/python-modules/discogs_client/default.nix

@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "discogs-client";
-  version = "2.2.1";
+  version = "2.2.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "9e32b5e45cff41af8025891c71aa3025b3e1895de59b37c11fd203a8af687414";
+    sha256 = "1n23xy33fdp3dq0hhfdg0lx4z7rhdi74ik8v1mc7rql1jbxl7bmf";
   };
 
   propagatedBuildInputs = [ requests oauthlib ];

pkgs/development/python-modules/distributed/default.nix

@@ -26,12 +26,12 @@
 
 buildPythonPackage rec {
   pname = "distributed";
-  version = "1.25.1";
+  version = "1.25.2";
 
   # get full repository need conftest.py to run tests
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1qay94amxs0k6lmwhy07bq54m5zms0rjmnp7a66fldipjla6w8lg";
+    sha256 = "0rv5831xv5byx0f8ly3mlji207nb3bzq6qmdf7ishrgy9kpphc68";
   };
 
   checkInputs = [ pytest pytest-repeat pytest-faulthandler pytest-timeout mock joblib ];

pkgs/development/python-modules/flask-socketio/default.nix

@@ -8,11 +8,11 @@
 
 buildPythonPackage rec {
   pname = "Flask-SocketIO";
-  version = "3.1.0";
+  version = "3.1.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "a7188b35f7874903f554b3a1a3a4465213e765c4f17182fa5cb3d9f6915da4c1";
+    sha256 = "1hcl0qnhfqc9x4y6fnvsrablim8yfqfg2i097b2v3srlz69vdyr6";
   };
 
   propagatedBuildInputs = [

pkgs/development/python-modules/flexmock/default.nix

@@ -6,11 +6,11 @@
 
 buildPythonPackage rec {
   pname = "flexmock";
-  version = "0.10.2";
+  version = "0.10.3";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "fe95c8727f4db73dc8f2f7b4548bffe7992440a965fefd60da291abda5352c2b";
+    sha256 = "031c624pdqm7cc0xh4yz5k69gqxn2bbrjz13s17684q5shn0ik21";
   };
 
   checkInputs = [ pytest ];

pkgs/development/python-modules/gast/default.nix

@@ -2,10 +2,10 @@
 
 buildPythonPackage rec {
   pname = "gast";
-  version =  "0.2.0";
+  version =  "0.2.2";
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0c296xm1vz9x4w4inmdl0k8mnc0i9arw94si2i7pglpc461r0s3h";
+    sha256 = "1w5dzdb3gpcfmd2s0b93d8gff40a1s41rv31458z14inb3s9v4zy";
   };
   checkInputs = [ astunparse ] ;
   meta = with stdenv.lib; {

pkgs/development/python-modules/iptools/default.nix

@@ -5,12 +5,12 @@
 }:
 
 buildPythonPackage rec {
-  version = "0.6.1";
+  version = "0.7.0";
   pname = "iptools";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0f03875a5bed740ba4bf44decb6a78679cca914a1ee8a6cc468114485c4d98e3";
+    sha256 = "1sp2v76qqsgqjk0vqfbm2s4sc4mi0gkkpzjnvwih3ymmidilz2hi";
   };
 
   buildInputs = [ nose ];

pkgs/development/python-modules/keyrings-alt/default.nix

@@ -4,11 +4,11 @@
 
 buildPythonPackage rec {
   pname = "keyrings.alt";
-  version = "3.1";
+  version = "3.1.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0nnva8g03dv6gdhjk1ihn2qw7g15232fyj8shipah9whgfv8d75m";
+    sha256 = "0lgp2d3hrpvbb2rfz18vrv5lrck72k3l2f2cpkbks2kigrfbgiqb";
   };
 
   postPatch = ''

pkgs/development/python-modules/paste/default.nix

@@ -8,12 +8,12 @@
 
 buildPythonPackage rec {
   pname = "paste";
-  version = "3.0.5";
+  version = "3.0.6";
 
   src = fetchPypi {
     pname = "Paste";
     inherit version;
-    sha256 = "1bb2068807ce3592d313ce9b1a25a7ac842a504e7e3b005027193d17a043d1a8";
+    sha256 = "14lbi9asn5agsdf7r97prkjpz7amgmp529lbvfhf0nv881xczah6";
   };
 
   propagatedBuildInputs = [ six ];

pkgs/development/python-modules/peewee/default.nix

@@ -10,14 +10,14 @@
 buildPythonPackage rec {
 
   pname = "peewee";
-  version = "3.8.0";
+  version = "3.8.1";
 
   # pypi release does not provide tests
   src = fetchFromGitHub {
     owner = "coleifer";
     repo = pname;
     rev = version;
-    sha256 = "0kqhpalw1587zaz3fcj13mpzs5950l6fm3qlcfqsfp16h8w0s89f";
+    sha256 = "0z6fdihmvqfg0ysa94g4w2w7146fsi2gnrgh90b4i1s3wj8iaxqy";
   };
 
 

pkgs/development/python-modules/pyrsistent/default.nix

@@ -9,11 +9,11 @@
 
 buildPythonPackage rec {
   pname = "pyrsistent";
-  version = "0.14.6";
+  version = "0.14.9";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "5a31f6b093da3401fefdeb53a0980e3145bb9d2bf852b579cc7b39c7f0016c87";
+    sha256 = "0xwaqjjn665wd1rllqzndmlc8yzfw2wxakpfwlh6ir6kgbajff2s";
   };
 
   propagatedBuildInputs = [ six ];

pkgs/development/python-modules/pyshp/default.nix

@@ -2,12 +2,12 @@
 , setuptools }:
 
 buildPythonPackage rec {
-  version = "2.0.0";
+  version = "2.0.1";
   pname = "pyshp";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0l5a28878vplwclqvjj7v0xx6zlr03ia1dkq5hc3mxf05bahiwyz";
+    sha256 = "049xj760s75nkvs7rhz710a6x3lvvfajddknmfz1vkf2p3f2l2as";
   };
 
   buildInputs = [ setuptools ];

pkgs/development/python-modules/pytest-django/default.nix

@@ -10,11 +10,11 @@
 }:
 buildPythonPackage rec {
   pname = "pytest-django";
-  version = "3.4.4";
+  version = "3.4.5";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "07zl2438gavrcykva6i2lpxmzgf90h4xlm3nqgd7wsqz2yh727zy";
+    sha256 = "0dh7jm1d37p54pgc7cx4izz6khsd860a6hw64gx74c8fjfz36p8s";
   };
 
   nativeBuildInputs = [ pytest setuptools_scm ];

pkgs/development/python-modules/qtawesome/default.nix

@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "QtAwesome";
-  version = "0.5.3";
+  version = "0.5.5";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "8dfd8bcac56caa6d81639fc43db673b62aeca6129f4c8e9b1da17a32c0d309fd";
+    sha256 = "0yb194c927g9nqknfb49nfqv32l74bb0m71wswijbbybb7syabbl";
   };
 
   propagatedBuildInputs = [ qtpy six pyside ];

pkgs/development/python-modules/sortedcollections/default.nix

@@ -6,16 +6,16 @@
 
 buildPythonPackage rec {
   pname = "sortedcollections";
-  version = "1.0.1";
+  version = "1.1.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "12q1gf81l53mv634hk259aql69k9572nfv5gsn8gxlywdly2z63b";
+    sha256 = "12nkw69lnyvh9wy6rsd0ng4bcia81vkhj1rj1kj1k3vzppn0sgmr";
   };
 
-  buildInputs = [ sortedcontainers ];
+  propagatedBuildInputs = [ sortedcontainers ];
 
-  # wants to test all python versions with tox:
+  # No tests in PyPi tarball
   doCheck = false;
 
   meta = with stdenv.lib; {

pkgs/development/python-modules/supervisor/default.nix

@@ -4,11 +4,11 @@
 }:
 buildPythonPackage rec {
   pname = "supervisor";
-  version = "3.3.4";
+  version = "3.3.5";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0wp62z9xprvz2krg02xnbwcnq6pxfq3byd8cxx8c2d8xznih28i1";
+    sha256 = "1w3ahridzbc6rxfpbyx8lij6pjlcgf2ymzyg53llkjqxalp6sk8v";
   };
 
   checkInputs = [ mock ];

pkgs/development/python-modules/twilio/default.nix

@@ -3,13 +3,13 @@
 
 buildPythonPackage rec {
   pname = "twilio";
-  version = "6.22.0";
+  version = "6.23.0";
   # tests not included in PyPi, so fetch from github instead
   src = fetchFromGitHub {
     owner = "twilio";
     repo = "twilio-python";
     rev = version;
-    sha256 = "1kh2hcjm1qyisqqjyjnilkyj3vv6l5flpjyqkq27pwxvc461aapp";
+    sha256 = "07fb8sklj8527aa8hi71w4iibgmcnndmnqjdcp82ff80ladn9i5y";
   };
 
   buildInputs = [ nose mock ];

pkgs/development/python-modules/uncompyle6/default.nix

@@ -11,11 +11,11 @@
 
 buildPythonPackage rec {
   pname = "uncompyle6";
-  version = "3.2.4";
+  version = "3.2.5";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0lv0ks7w5bsl8bndm6ikl4yprkq2ps23y409ldlycrvlggjg44y5";
+    sha256 = "1z4489grxc06pxmfy63b6x6h54p05fhbigvrrgr1kvdciy2nvz04";
   };
 
   checkInputs = [ nose pytest hypothesis six ];

pkgs/development/python-modules/unittest-xml-reporting/default.nix

@@ -2,7 +2,7 @@
 
 buildPythonPackage rec {
   pname = "unittest-xml-reporting";
-  version = "2.2.0";
+  version = "2.2.1";
 
   propagatedBuildInputs = [six];
 
@@ -11,7 +11,7 @@ buildPythonPackage rec {
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "3ba27af788bddb4403ee72561bfd3df2deb27a926a5426aa9beeb354c59b9c44";
+    sha256 = "1cn870jgf4h0wb4bnafw527g1dj6rd3rgyjz4f64khd0zx9qs84z";
   };
   meta = with lib; {
     homepage = https://github.com/xmlrunner/unittest-xml-reporting/tree/master/;

pkgs/development/python-modules/vine/default.nix

@@ -3,13 +3,13 @@
 
 buildPythonPackage rec {
   pname = "vine";
-  version = "1.1.4";
+  version = "1.2.0";
 
   disable = pythonOlder "2.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "52116d59bc45392af9fdd3b75ed98ae48a93e822cee21e5fda249105c59a7a72";
+    sha256 = "0xjz2sjbr5jrpjk411b7alkghdskhphgsqqrbi7abqfh2pli6j7f";
   };
 
   buildInputs = [ case pytest ];

pkgs/development/python-modules/w3lib/default.nix

@@ -7,11 +7,11 @@
 
 buildPythonPackage rec {
   pname = "w3lib";
-  version = "1.19.0";
+  version = "1.20.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "55994787e93b411c2d659068b51b9998d9d0c05e0df188e6daf8f45836e1ea38";
+    sha256 = "1mqwlc1cr15jxr3gr8pqqh5gf0gppm2kcvdi8vid6y8wmq9bjkg5";
   };
 
   buildInputs = [ six pytest ];

pkgs/development/python-modules/yamllint/default.nix

@@ -3,11 +3,11 @@
 
 buildPythonPackage rec {
   pname = "yamllint";
-  version = "1.13.0";
+  version = "1.14.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "19fznzypkxgl1i9fy4d72xp7rbk30g62rjqmcmnqf3ij46p8flj2";
+    sha256 = "0x9ansmhqvc3rj0nbhpl0jdqr5pk6qdxf7i6r4gr0hzqr50vdaf0";
   };
 
   checkInputs = [ nose ];

pkgs/development/tools/bazel-watcher/default.nix

@@ -4,30 +4,22 @@
 , fetchpatch
 , git
 , go
+, python
 , stdenv
 }:
 
 buildBazelPackage rec {
   name = "bazel-watcher-${version}";
-  version = "0.5.0";
+  version = "0.9.0";
 
   src = fetchFromGitHub {
     owner = "bazelbuild";
     repo = "bazel-watcher";
     rev = "v${version}";
-    sha256 = "1sis723hwax4dg0c28x20yj0hjli66q1ykcvjirgy57znz4iwlq9";
+    sha256 = "0yphks1qlp3xcbq5mg95lxrhl3q8pza5g3f9i2j6y7dsfz0s0l4v";
   };
 
-  patches = [
+  nativeBuildInputs = [ go git python ];
-    (fetchpatch {
-      url = "https://github.com/bazelbuild/bazel-watcher/commit/4d5928eee3dd5843a1b55136d914b78fef7f25d0.patch";
-      sha256 = "0gxzcdqgifrmvznfy0p5nd11b39n2pwxcvpmhc6hxf85mwlxz7dg";
-    })
-
-    ./update-gazelle-fix-ssl.patch
-  ];
-
-  nativeBuildInputs = [ go git ];
 
   bazelTarget = "//ibazel";
 
@@ -52,9 +44,15 @@ buildBazelPackage rec {
       # a different sha256 for the fetch phase.
       rm -rf $bazelOut/external/{go_sdk,\@go_sdk.marker}
       sed -e '/^FILE:@go_sdk.*/d' -i $bazelOut/external/\@*.marker
+
+      # Remove the gazelle tools, they contain go binaries that are built
+      # non-deterministically. As long as the gazelle version matches the tools
+      # should be equivalent.
+      rm -rf $bazelOut/external/{bazel_gazelle_go_repository_tools,\@bazel_gazelle_go_repository_tools.marker}
+      sed -e '/^FILE:@bazel_gazelle_go_repository_tools.*/d' -i $bazelOut/external/\@*.marker
     '';
 
-    sha256 = "1iyjvibvlwg980p7nizr6x5v31dyp4a344f0xn839x393583k59d";
+    sha256 = "14k1cpw4h78c2gk294xzq9a9nv09yabdrahbzgin8xizbgdxn1q8";
   };
 
   buildAttrs = {

pkgs/development/tools/bazel-watcher/update-gazelle-fix-ssl.patch

@@ -1,19 +0,0 @@
-diff --git a/WORKSPACE b/WORKSPACE
-index 4011d9b..d085ae8 100644
---- a/WORKSPACE
-+++ b/WORKSPACE
-@@ -52,11 +52,9 @@ http_archive(
-
- http_archive(
-     name = "bazel_gazelle",
--    sha256 = "c0a5739d12c6d05b6c1ad56f2200cb0b57c5a70e03ebd2f7b87ce88cabf09c7b",
--    urls = [
--        "https://mirror.bazel.build/github.com/bazelbuild/bazel-gazelle/releases/download/0.14.0/bazel-gazelle-0.14.0.tar.gz",
--        "https://github.com/bazelbuild/bazel-gazelle/releases/download/0.14.0/bazel-gazelle-0.14.0.tar.gz",
--    ],
-+    sha256 = "0600ea2daf98170211dc561fd348a8a9328c91eb6df66a381eaaf0bcd122e80b",
-+    strip_prefix = "bazel-gazelle-b34f46af2f31ee0470e7364352c2376bcc10d079",
-+    url = "https://github.com/bazelbuild/bazel-gazelle/archive/b34f46af2f31ee0470e7364352c2376bcc10d079.tar.gz",
- )
-
- load("@io_bazel_rules_go//go:def.bzl", "go_register_toolchains", "go_rules_dependencies")

pkgs/development/tools/build-managers/bazel/default.nix

@@ -1,4 +1,4 @@
-{ stdenv, lib, fetchurl, fetchpatch, runCommand, makeWrapper
+{ stdenv, callPackage, lib, fetchurl, fetchpatch, runCommand, makeWrapper
 , jdk, zip, unzip, bash, writeCBin, coreutils
 , which, python, perl, gnused, gnugrep, findutils
 # Apple dependencies
@@ -38,6 +38,11 @@ stdenv.mkDerivation rec {
     platforms = platforms.linux ++ platforms.darwin;
   };
 
+  # additional tests that check bazel’s functionality
+  passthru.tests = {
+    python_bin_path = callPackage ./python-bin-path-test.nix {};
+  };
+
   name = "bazel-${version}";
 
   src = fetchurl {
@@ -47,8 +52,9 @@ stdenv.mkDerivation rec {
 
   sourceRoot = ".";
 
-  patches =
+  patches = [
-    lib.optional enableNixHacks ./nix-hacks.patch;
+    ./python-stub-path-fix.patch
+  ] ++ lib.optional enableNixHacks ./nix-hacks.patch;
 
   # Bazel expects several utils to be available in Bash even without PATH. Hence this hack.
 
@@ -118,6 +124,10 @@ stdenv.mkDerivation rec {
     '';
 
     genericPatches = ''
+      # Substitute python's stub shebang to plain python path. (see TODO add pr URL)
+      substituteInPlace src/main/java/com/google/devtools/build/lib/bazel/rules/python/python_stub_template.txt\
+          --replace "/usr/bin/env python" "${python}/bin/python" \
+          --replace "NIX_STORE_PYTHON_PATH" "${python}/bin/python" \
       # substituteInPlace is rather slow, so prefilter the files with grep
       grep -rlZ /bin src/main/java/com/google/devtools | while IFS="" read -r -d "" path; do
         # If you add more replacements here, you must change the grep above!

pkgs/development/tools/build-managers/bazel/python-bin-path-test.nix

@@ -0,0 +1,55 @@
+{ stdenv, lib, writeText, runCommandCC, bazel }:
+
+let
+  WORKSPACE = writeText "WORKSPACE" ''
+    workspace(name = "our_workspace")
+  '';
+
+  pythonLib = writeText "lib.py" ''
+    def foo():
+      return 43
+  '';
+
+  pythonBin = writeText "bin.py" ''
+    from lib import foo
+
+    assert foo() == 43
+  '';
+
+  pythonBUILD = writeText "BUILD" ''
+    py_library(
+      name = "lib",
+      srcs = [ "lib.py" ],
+    )
+
+    py_test(
+      name = "bin",
+      srcs = [ "bin.py" ],
+      deps = [ ":lib" ],
+    )
+  '';
+
+  runLocal = name: script: runCommandCC name { preferLocalBuild = true; } script;
+
+  workspaceDir = runLocal "our_workspace" ''
+    mkdir $out
+    cp ${WORKSPACE} $out/WORKSPACE
+    mkdir $out/python
+    cp ${pythonLib} $out/python/lib.py
+    cp ${pythonBin} $out/python/bin.py
+    cp ${pythonBUILD} $out/python/BUILD.bazel
+  '';
+
+  testBazel = runLocal "bazel-test-builtin-rules" ''
+    export HOME=$(mktemp -d)
+    cp -r ${workspaceDir}/* .
+    ${bazel}/bin/bazel --output_base=/tmp/bazel-tests/wd\
+      test \
+        --test_output=errors \
+        --host_javabase='@local_jdk//:jdk' \
+        //...
+
+    touch $out
+  '';
+
+in testBazel

pkgs/development/tools/build-managers/bazel/python-stub-path-fix.patch

@@ -0,0 +1,13 @@
+diff --git a/src/main/java/com/google/devtools/build/lib/bazel/rules/python/python_stub_template.txt b/src/main/java/com/google/devtools/build/lib/bazel/rules/python/python_stub_template.txt
+index dac21c9a83..69b11c283f 100644
+--- a/src/main/java/com/google/devtools/build/lib/bazel/rules/python/python_stub_template.txt
++++ b/src/main/java/com/google/devtools/build/lib/bazel/rules/python/python_stub_template.txt
+@@ -67,7 +67,7 @@ def FindPythonBinary(module_space):
+     return os.path.join(module_space, PYTHON_BINARY)
+   else:
+     # Case 4: Path has to be looked up in the search path.
+-    return SearchPath(PYTHON_BINARY)
++    return "NIX_STORE_PYTHON_PATH"
+ 
+ def CreatePythonPathEntries(python_imports, module_space):
+   parts = python_imports.split(':');

pkgs/development/tools/build-managers/conan/default.nix

@@ -1,4 +1,4 @@
-{ lib, python3, fetchpatch, git }:
+{ lib, python3, git }:
 
 let newPython = python3.override {
   packageOverrides = self: super: {
@@ -10,71 +10,64 @@ let newPython = python3.override {
       };
     });
     node-semver = super.node-semver.overridePythonAttrs (oldAttrs: rec {
-      version = "0.2.0";
+      version = "0.6.1";
       src = oldAttrs.src.override {
         inherit version;
-        sha256 = "1080pdxrvnkr8i7b7bk0dfx6cwrkkzzfaranl7207q6rdybzqay3";
+        sha256 = "1dv6mjsm67l1razcgmq66riqmsb36wns17mnipqr610v0z0zf5j0";
       };
     });
-    astroid = super.astroid.overridePythonAttrs (oldAttrs: rec {
+    future = super.future.overridePythonAttrs (oldAttrs: rec {
-      version = "1.6.5";
+      version = "0.16.0";
       src = oldAttrs.src.override {
         inherit version;
-        sha256 = "fc9b582dba0366e63540982c3944a9230cbc6f303641c51483fa547dcc22393a";
+        sha256 = "1nzy1k4m9966sikp0qka7lirh8sqrsyainyf8rk97db7nwdfv773";
       };
     });
-    pylint = super.pylint.overridePythonAttrs (oldAttrs: rec {
+    tqdm = super.tqdm.overridePythonAttrs (oldAttrs: rec {
-      version = "1.8.4";
+      version = "4.28.1";
       src = oldAttrs.src.override {
         inherit version;
-        sha256 = "34738a82ab33cbd3bb6cd4cef823dbcabdd2b6b48a4e3a3054a2bbbf0c712be9";
+        sha256 = "1fyybgbmlr8ms32j7h76hz5g9xc6nf0644mwhc40a0s5k14makav";
       };
-
     });
   };
 };
 
 in newPython.pkgs.buildPythonApplication rec {
-  version = "1.6.0";
+  version = "1.11.2";
   pname = "conan";
 
   src = newPython.pkgs.fetchPypi {
     inherit pname version;
-    sha256 = "386476d3af1fa390e4cd96e737876e7d1f1c0bca09519e51fd44c1bb45990caa";
+    sha256 = "0b4r9n6541jjp2lsdzc1nc6mk1a953w0d4ynjss3ns7pp89y4nd4";
   };
-
-  # Bump PyYAML to 3.13
-  patches = fetchpatch {
-    url = https://github.com/conan-io/conan/commit/9d3d7a5c6e89b3aa321735557e5ad3397bb80568.patch;
-    sha256 = "1qdy6zj3ypl1bp9872mzaqg1gwigqldxb1glvrkq3p4za62p546k";
-  };
-
   checkInputs = [
     git
   ] ++ (with newPython.pkgs; [
+    codecov
+    mock
+    node-semver
     nose
     parameterized
-    mock
     webtest
-    codecov
   ]);
 
   propagatedBuildInputs = with newPython.pkgs; [
-    requests fasteners pyyaml pyjwt colorama patch
+    colorama deprecation distro fasteners bottle
-    bottle pluginbase six distro pylint node-semver
+    future node-semver patch pygments pluginbase
-    future pygments mccabe deprecation
+    pyjwt pylint pyyaml requests six tqdm
   ];
 
   checkPhase = ''
     export HOME="$TMP/conan-home"
     mkdir -p "$HOME"
-    nosetests conans.test
   '';
 
   meta = with lib; {
     homepage = https://conan.io;
     description = "Decentralized and portable C/C++ package manager";
     license = licenses.mit;
+    maintainers = with maintainers; [ HaoZeke ];
     platforms = platforms.linux;
   };
 }

pkgs/development/tools/database/ephemeralpg/default.nix

@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, postgresql, makeWrapper }:
+{ stdenv, fetchurl, postgresql, getopt, makeWrapper }:
 stdenv.mkDerivation rec {
   name = "ephemeralpg-${version}";
   version = "2.5";
@@ -10,11 +10,13 @@ stdenv.mkDerivation rec {
   installPhase = ''
     mkdir -p $out
     PREFIX=$out make install
-    wrapProgram $out/bin/pg_tmp --prefix PATH : ${postgresql}/bin
+    wrapProgram $out/bin/pg_tmp --prefix PATH : ${stdenv.lib.makeBinPath [ postgresql getopt ]}
   '';
-  meta = {
+  meta = with stdenv.lib; {
     description = ''Run tests on an isolated, temporary PostgreSQL database.'';
-    license = stdenv.lib.licenses.isc;
+    license = licenses.isc;
     homepage = http://ephemeralpg.org/;
+    platforms = platforms.all;
+    maintainers = with maintainers; [ hrdinka ];
   };
 }

pkgs/development/tools/database/pg_tmp/default.nix

@@ -1,25 +0,0 @@
-{ fetchFromBitbucket, stdenv }:
-
-stdenv.mkDerivation rec {
-  name = "pg_tmp-${version}";
-  version = "2.3";
-
-  src = fetchFromBitbucket {
-    owner = "eradman";
-    repo = "ephemeralpg";
-    rev = "ephemeralpg-${version}";
-    sha256 = "0j0va9pch2xhwwx4li3qx3lkgrd79c0hcy5w5y1cqax571hv89wa";
-  };
-
-  installPhase = ''
-    PREFIX=$out make install
-  '';
-
-  meta = with stdenv.lib; {
-    homepage = http://ephemeralpg.org;
-    description = "Run tests on an isolated, temporary PostgreSQL database";
-    license = licenses.isc;
-    platforms = platforms.all;
-    maintainers = with maintainers; [ hrdinka ];
-  };
-}

pkgs/development/tools/jira_cli/default.nix

@@ -1,6 +1,6 @@
-{ stdenv, libffi, openssl, pythonPackages }:
+{ stdenv, libffi, openssl, python3Packages }:
 let
-  inherit (pythonPackages) fetchPypi buildPythonApplication vcrpy mock hiro;
+  inherit (python3Packages) fetchPypi buildPythonApplication vcrpy mock hiro;
 in
   buildPythonApplication rec {
     pname = "jira-cli";
@@ -16,9 +16,9 @@ in
 
     # Tests rely on VCR cassettes being written during tests. R/O nix store prevents this.
     doCheck = false;
-    checkInputs = with pythonPackages; [ vcrpy mock hiro ];
+    checkInputs = with python3Packages; [ vcrpy mock hiro ];
     buildInputs = [ libffi openssl ];
-    propagatedBuildInputs = with pythonPackages; [
+    propagatedBuildInputs = with python3Packages; [
       argparse ordereddict requests six suds-jurko termcolor keyring
       jira  keyrings-alt
     ];

pkgs/development/tools/jl/default.nix

@@ -25,4 +25,5 @@ mkDerivation rec {
   license = stdenv.lib.licenses.bsd3;
   description = "Functional sed for JSON";
   maintainers = with stdenv.lib.maintainers; [ fgaz ];
+  homepage = https://github.com/chrisdone/jl;
 }

pkgs/development/tools/misc/ccls/default.nix

@@ -0,0 +1,43 @@
+{ stdenv, fetchFromGitHub, makeWrapper
+, cmake, llvmPackages, rapidjson }:
+
+stdenv.mkDerivation rec {
+  name    = "ccls-${version}";
+  version = "0.20181225.7";
+
+  src = fetchFromGitHub {
+    owner = "MaskRay";
+    repo = "ccls";
+    rev = version;
+    sha256 = "1qgb2nk4nsgbx4qwymwlzi202daskk536a5l877fsp878jpp61cm";
+  };
+
+  nativeBuildInputs = [ cmake makeWrapper ];
+  buildInputs = with llvmPackages; [ clang-unwrapped llvm rapidjson ];
+
+  cmakeFlags = [ "-DSYSTEM_CLANG=ON" ];
+
+  shell = stdenv.shell;
+  postFixup = ''
+    # We need to tell ccls where to find the standard library headers.
+
+    standard_library_includes="\\\"-isystem\\\", \\\"${stdenv.lib.getDev stdenv.cc.libc}/include\\\""
+    standard_library_includes+=", \\\"-isystem\\\", \\\"${llvmPackages.libcxx}/include/c++/v1\\\""
+    export standard_library_includes
+
+    wrapped=".ccls-wrapped"
+    export wrapped
+
+    mv $out/bin/ccls $out/bin/$wrapped
+    substituteAll ${./wrapper} $out/bin/ccls
+    chmod --reference=$out/bin/$wrapped $out/bin/ccls
+  '';
+
+  meta = with stdenv.lib; {
+    description = "A c/c++ language server powered by clang";
+    homepage    = https://github.com/MaskRay/ccls;
+    license     = licenses.asl20;
+    platforms   = platforms.linux;
+    maintainers = [ maintainers.mic92 ];
+  };
+}

pkgs/development/tools/misc/ccls/wrapper

@@ -0,0 +1,12 @@
+#! @shell@ -e
+
+initString="--init={\"clang\":{\"extraArgs\": [@standard_library_includes@"
+
+if [ "${NIX_CFLAGS_COMPILE}" != "" ]; then
+  read -a cflags_array <<< ${NIX_CFLAGS_COMPILE}
+  initString+=$(printf ', \"%s\"' "${cflags_array[@]}")
+fi
+
+initString+="]}}"
+
+exec -a "$0" "@out@/bin/@wrapped@" "${initString}" "${extraFlagsArray[@]}" "$@"

pkgs/development/tools/misc/pkgconf/default.nix

@@ -1,11 +1,11 @@
 { stdenv, fetchurl }:
 
 stdenv.mkDerivation rec {
-  name = "pkgconf-1.5.4";
+  name = "pkgconf-1.6.0";
 
   src = fetchurl {
     url = "https://distfiles.dereferenced.org/pkgconf/${name}.tar.xz";
-    sha256 = "0r26qmij9lxpz183na3dxj6lamcma94cjhasy19fya44w2j68n4w";
+    sha256 = "1rgcw7lbmxv45y4ybnlh1wzhd1d15d2616499ajjnrvnnnms6db1";
   };
 
   meta = with stdenv.lib; {

pkgs/development/tools/ocaml/ocp-indent/default.nix

@@ -1,31 +1,22 @@
-{ stdenv, fetchzip, ocaml, findlib, dune, ocp-build, cmdliner }:
+{ lib, fetchzip, buildDunePackage, cmdliner }:
 
-let inherit (stdenv.lib) getVersion versionAtLeast; in
+buildDunePackage rec {
-
+  version = "1.7.0";
-assert versionAtLeast (getVersion ocaml) "3.12.1";
+  pname = "ocp-indent";
-assert versionAtLeast (getVersion cmdliner) "1.0.0";
-assert versionAtLeast (getVersion ocp-build) "1.99.6-beta";
-
-stdenv.mkDerivation rec {
-
-  name = "ocaml${ocaml.version}-ocp-indent-${version}";
-  version = "1.6.1";
 
   src = fetchzip {
     url = "https://github.com/OCamlPro/ocp-indent/archive/${version}.tar.gz";
-    sha256 = "0rcaa11mjqka032g94wgw9llqpflyk3ywr3lr6jyxbh1rjvnipnw";
+    sha256 = "006x3fsd61vxnxj4chlakyk3b2s10pb0bdl46g0ghf3j8h33x7hc";
   };
 
-  nativeBuildInputs = [ ocp-build ];
+  minimumOCamlVersion = "4.02";
-  buildInputs = [ ocaml findlib cmdliner ];
 
-  inherit (dune) installPhase;
+  buildInputs = [ cmdliner ];
 
-  meta = with stdenv.lib; {
+  meta = with lib; {
     homepage = http://typerex.ocamlpro.com/ocp-indent.html;
     description = "A customizable tool to indent OCaml code";
     license = licenses.gpl3;
-    platforms = ocaml.meta.platforms or [];
     maintainers = [ maintainers.jirkamarsik ];
   };
 }

pkgs/development/tools/vgo2nix/default.nix

@@ -9,7 +9,7 @@
 
 buildGoPackage rec {
   name = "vgo2nix-${version}";
-  version = "unstable-2018-10-14";
+  version = "unstable-2018-12-02";
   goPackagePath = "github.com/adisbladis/vgo2nix";
 
   nativeBuildInputs = [ makeWrapper ];
@@ -17,8 +17,8 @@ buildGoPackage rec {
   src = fetchFromGitHub {
     owner = "adisbladis";
     repo = "vgo2nix";
-    rev = "a36137a2b9675f5e9b7e0a7840bc9fe9f2414d4e";
+    rev = "b298f4fb799fc532488fc887e1938668d7f3d219";
-    sha256 = "1658hr1535v8w3s41q0bcgk8hmisjn8gcw7i3n2d2igszn1dp0q4";
+    sha256 = "0gr5vfz5wzpcyxsz948aniyfbryg53agvzbkhdnb5hiwhi7nay9p";
   };
 
   goDeps = ./deps.nix;

pkgs/development/tools/yq/default.nix

@@ -2,7 +2,7 @@
 
 buildPythonApplication rec {
   pname = "yq";
-  version = "2.7.1";
+  version = "2.7.2";
 
   propagatedBuildInputs = [ pyyaml xmltodict jq ];
 
@@ -11,7 +11,7 @@ buildPythonApplication rec {
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1c10wbhgx8d8s44a8g2vzn4cmvkf7z7yqxrnk88aapgi51i786q0";
+    sha256 = "1fwvwy75n4rqzh6sxyp2jmjqc7939s0xmrhxw7zhdy6iacggvnpp";
   };
 
   meta = with lib; {