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bedtools: init at 2.26.0

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Justin Bedo 2017-03-07 15:54:31 +11:00 committed by Robert Helgesson
parent 661048c803
commit 7f214e6410
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2 changed files with 27 additions and 0 deletions
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25
pkgs/applications/science/biology/bedtools/default.nix Normal file
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@ -0,0 +1,25 @@
{stdenv, fetchFromGitHub, zlib, python}:
stdenv.mkDerivation rec {
name = "bedtools-${version}";
version = "2.26.0";
src = fetchFromGitHub {
owner = "arq5x";
repo = "bedtools2";
rev = "v${version}";
sha256 = "1j2ia68rmcw3qksjm5gvv1cb84bh76vmln59mvncr2an23f5a3ss";
};
buildInputs = [ zlib python ];
buildPhase = "make prefix=$out SHELL=${stdenv.shell} -j $NIX_BUILD_CORES";
installPhase = "make prefix=$out SHELL=${stdenv.shell} install";
meta = with stdenv.lib; {
description = "A powerful toolset for genome arithmetic.";
license = licenses.gpl2;
homepage = https://bedtools.readthedocs.io/en/latest/;
maintainers = with maintainers; [ jbedo ];
platforms = platforms.unix;
};
}

2
pkgs/top-level/all-packages.nix
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@ -16970,6 +16970,8 @@ with pkgs;
stdenv = overrideCC stdenv gcc49; stdenv = overrideCC stdenv gcc49;
}; };
bedtools = callPackage ../applications/science/biology/bedtools/default.nix { };
bcftools = callPackage ../applications/science/biology/bcftools { }; bcftools = callPackage ../applications/science/biology/bcftools { };
ecopcr = callPackage ../applications/science/biology/ecopcr { }; ecopcr = callPackage ../applications/science/biology/ecopcr { };