mirror of
https://github.com/NixOS/nixpkgs.git
synced 2025-02-07 12:44:20 +00:00
Merge pull request #324820 from natsukium/fix/python-modules
[staging-next] fix python modules
This commit is contained in:
OTABI Tomoya
GitHub
commit
5c575f958d
@ -8,8 +8,8 @@
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importlib-metadata,
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mock,
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openssh,
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packaging,
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pexpect,
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psutil,
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pytest-mock,
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pytest-timeout,
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pytest-xdist,
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@ -19,7 +19,6 @@
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pyyaml,
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setuptools,
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setuptools-scm,
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six,
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}:
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buildPythonPackage rec {
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@ -27,25 +26,28 @@ buildPythonPackage rec {
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version = "2.4.0";
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pyproject = true;
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disabled = pythonOlder "3.8";
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disabled = pythonOlder "3.9";
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src = fetchPypi {
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inherit pname version;
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hash = "sha256-gtArJUiDDzelNRe2XII8SvNxBpQGx9ITtckEHUXgxbY=";
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};
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postPatch = ''
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substituteInPlace pyproject.toml \
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--replace '"setuptools>=45, <=69.0.2", "setuptools-scm[toml]>=6.2, <=8.0.4"' '"setuptools", "setuptools-scm"'
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'';
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build-system = [
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setuptools
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setuptools-scm
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];
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dependencies = [
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ansible-core
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psutil
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packaging
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pexpect
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python-daemon
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pyyaml
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six
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] ++ lib.optionals (pythonOlder "3.10") [ importlib-metadata ];
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nativeCheckInputs = [
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@ -9,6 +9,7 @@
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hatch-fancy-pypi-readme,
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hatchling,
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httpx,
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jiter,
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pydantic,
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pytest-asyncio,
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pytestCheckHook,
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@ -42,6 +43,7 @@ buildPythonPackage rec {
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anyio
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distro
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httpx
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jiter
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sniffio
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pydantic
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tokenizers
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@ -36,22 +36,18 @@ buildPythonPackage rec {
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hash = "sha256-zAjGVICrYgai6GFpcJyigKxn7kNEZKclggR5ktzrCQ0=";
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};
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pythonRelaxDeps = [ "clarifai-grpc" ];
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pythonRemoveDeps = [ "opencv-python" ];
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pythonRelaxDeps = [
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"clarifai-grpc"
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"schema"
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];
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build-system = [ setuptools ];
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dependencies = [
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clarifai-grpc
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inquirerpy
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llama-index-core
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numpy
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opencv4
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pandas
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pillow
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pypdf
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pyyaml
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rich
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schema
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@ -73,6 +69,8 @@ buildPythonPackage rec {
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disabledTests = [
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# Test requires network access and API key
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"test_export_workflow_general"
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"test_validate_invalid_id"
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"test_validate_invalid_hex_id"
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];
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disabledTestPaths = [
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52
pkgs/development/python-modules/dbt-adapters/default.nix
Normal file
52
pkgs/development/python-modules/dbt-adapters/default.nix
Normal file
@ -0,0 +1,52 @@
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{
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lib,
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buildPythonPackage,
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fetchFromGitHub,
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hatchling,
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agate,
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dbt-common,
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mashumaro,
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protobuf,
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pytz,
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typing-extensions,
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pytestCheckHook,
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}:
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buildPythonPackage rec {
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pname = "dbt-adapters";
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version = "1.3.2";
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pyproject = true;
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src = fetchFromGitHub {
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owner = "dbt-labs";
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repo = "dbt-adapters";
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rev = "refs/tags/v${version}";
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hash = "sha256-Erx/j1x+I4ypPqBFzJRZk3ILr3ZG97Hvk4vXe2p6cDc=";
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};
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build-system = [ hatchling ];
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dependencies = [
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agate
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dbt-common
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mashumaro
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protobuf
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pytz
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typing-extensions
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] ++ mashumaro.optional-dependencies.msgpack;
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pythonImportsCheck = [ "dbt.adapters" ];
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# circular dependencies
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doCheck = false;
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nativeCheckInputs = [ pytestCheckHook ];
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meta = {
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description = "The set of adapter protocols and base functionality that supports integration with dbt-core";
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homepage = "https://github.com/dbt-labs/dbt-adapters";
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changelog = "https://github.com/dbt-labs/dbt-adapters/blob/${src.rev}/CHANGELOG.md";
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license = lib.licenses.asl20;
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maintainers = with lib.maintainers; [ ];
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};
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}
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65
pkgs/development/python-modules/dbt-common/default.nix
Normal file
65
pkgs/development/python-modules/dbt-common/default.nix
Normal file
@ -0,0 +1,65 @@
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{
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lib,
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buildPythonPackage,
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fetchFromGitHub,
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hatchling,
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agate,
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colorama,
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isodate,
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jinja2,
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jsonschema,
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mashumaro,
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pathspec,
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protobuf,
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python-dateutil,
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requests,
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typing-extensions,
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pytest-mock,
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pytest-xdist,
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pytestCheckHook,
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}:
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buildPythonPackage rec {
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pname = "dbt-common";
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version = "1.3.0";
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pyproject = true;
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src = fetchFromGitHub {
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owner = "dbt-labs";
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repo = "dbt-common";
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rev = "refs/tags/v${version}";
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hash = "sha256-3UjwQy257ks21fQV0uZNKu5EsuzjlIAEcVtRWkR9x/4=";
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};
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build-system = [ hatchling ];
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dependencies = [
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agate
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colorama
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isodate
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jinja2
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jsonschema
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mashumaro
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pathspec
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protobuf
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python-dateutil
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requests
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typing-extensions
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] ++ mashumaro.optional-dependencies.msgpack;
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pythonImportsCheck = [ "dbt_common" ];
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nativeCheckInputs = [
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pytest-mock
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pytest-xdist
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pytestCheckHook
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];
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meta = {
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description = "Shared common utilities for dbt-core and adapter implementations use";
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homepage = "https://github.com/dbt-labs/dbt-common";
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changelog = "https://github.com/dbt-labs/dbt-common/blob/${src.rev}/CHANGELOG.md";
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license = lib.licenses.asl20;
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maintainers = with lib.maintainers; [ ];
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};
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}
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@ -2,15 +2,13 @@
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lib,
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agate,
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buildPythonPackage,
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cffi,
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click,
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colorama,
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daff,
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dbt-adapters,
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dbt-common,
|
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dbt-extractor,
|
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dbt-semantic-interfaces,
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fetchFromGitHub,
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hologram,
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idna,
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isodate,
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jinja2,
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logbook,
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mashumaro,
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@ -27,8 +25,6 @@
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setuptools,
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sqlparse,
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typing-extensions,
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urllib3,
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werkzeug,
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}:
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buildPythonPackage rec {
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@ -50,6 +46,7 @@ buildPythonPackage rec {
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pythonRelaxDeps = [
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"agate"
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"click"
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"dbt-semantic-interfaces"
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"mashumaro"
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"networkx"
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"logbook"
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@ -63,14 +60,12 @@ buildPythonPackage rec {
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dependencies = [
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agate
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cffi
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click
|
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colorama
|
||||
daff
|
||||
dbt-adapters
|
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dbt-common
|
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dbt-extractor
|
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dbt-semantic-interfaces
|
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hologram
|
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idna
|
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isodate
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jinja2
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logbook
|
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mashumaro
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@ -84,8 +79,6 @@ buildPythonPackage rec {
|
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requests
|
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sqlparse
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typing-extensions
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urllib3
|
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werkzeug
|
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] ++ mashumaro.optional-dependencies.msgpack;
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|
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# tests exist for the dbt tool but not for this package specifically
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@ -2,28 +2,39 @@
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lib,
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agate,
|
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buildPythonPackage,
|
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fetchFromGitHub,
|
||||
dbt-adapters,
|
||||
dbt-common,
|
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dbt-core,
|
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hatchling,
|
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psycopg2,
|
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pythonOlder,
|
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setuptools,
|
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}:
|
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|
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buildPythonPackage {
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buildPythonPackage rec {
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pname = "dbt-postgres";
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version = "1.8.2";
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pyproject = true;
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inherit (dbt-core) version src;
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disabled = pythonOlder "3.8";
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disabled = pythonOlder "3.7";
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|
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sourceRoot = "${dbt-core.src.name}/plugins/postgres";
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src = fetchFromGitHub {
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owner = "dbt-labs";
|
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repo = "dbt-postgres";
|
||||
rev = "refs/tags/v${version}";
|
||||
hash = "sha256-E7Y2lY8aCiAZx5sLWwpOBLTrdOsCQAdWWJTvR2jGOaA=";
|
||||
};
|
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|
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env.DBT_PSYCOPG2_NAME = "psycopg2";
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|
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build-system = [ setuptools ];
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build-system = [ hatchling ];
|
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|
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pythonRemoveDeps = [ "psycopg2-binary" ];
|
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|
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dependencies = [
|
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agate
|
||||
dbt-adapters
|
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dbt-common
|
||||
dbt-core
|
||||
psycopg2
|
||||
];
|
||||
|
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@ -9,6 +9,7 @@
|
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pandas,
|
||||
poetry-core,
|
||||
pytest-remotedata,
|
||||
snapshottest,
|
||||
sqlalchemy,
|
||||
typing-extensions,
|
||||
}:
|
||||
@ -44,6 +45,7 @@ buildPythonPackage rec {
|
||||
hypothesis
|
||||
pandas
|
||||
pytest-remotedata
|
||||
snapshottest
|
||||
typing-extensions
|
||||
];
|
||||
|
||||
|
||||
@ -2,6 +2,7 @@
|
||||
lib,
|
||||
buildPythonPackage,
|
||||
fetchFromGitHub,
|
||||
fetchpatch,
|
||||
linear-operator,
|
||||
scikit-learn,
|
||||
setuptools,
|
||||
@ -23,6 +24,16 @@ buildPythonPackage rec {
|
||||
hash = "sha256-cpkfjx5G/4duL1Rr4nkHTHi03TDcYbcx3bKP2Ny7Ijo=";
|
||||
};
|
||||
|
||||
patches = [
|
||||
(fetchpatch {
|
||||
# https://github.com/cornellius-gp/gpytorch/pull/2545
|
||||
name = "scipy-1.14-compatibility.patch";
|
||||
url = "https://github.com/cornellius-gp/gpytorch/commit/2562be472521b8aec366de2619e3130a96fab982.patch";
|
||||
excludes = [ "setup.py" ];
|
||||
hash = "sha256-znOFpN6go2iIxP24VjJLKF3Laxcr4xV/IyP2y36g4QY=";
|
||||
})
|
||||
];
|
||||
|
||||
nativeBuildInputs = [
|
||||
setuptools
|
||||
setuptools-scm
|
||||
|
||||
@ -5,6 +5,7 @@
|
||||
buildPythonPackage,
|
||||
docstring-parser,
|
||||
fetchFromGitHub,
|
||||
jiter,
|
||||
openai,
|
||||
poetry-core,
|
||||
pydantic,
|
||||
@ -37,14 +38,15 @@ buildPythonPackage rec {
|
||||
pythonRelaxDeps = [
|
||||
"docstring-parser"
|
||||
"pydantic"
|
||||
"jiter"
|
||||
];
|
||||
|
||||
build-system = [ poetry-core ];
|
||||
|
||||
|
||||
dependencies = [
|
||||
aiohttp
|
||||
docstring-parser
|
||||
jiter
|
||||
openai
|
||||
pydantic
|
||||
rich
|
||||
@ -73,7 +75,6 @@ buildPythonPackage rec {
|
||||
disabledTestPaths = [
|
||||
# Tests require OpenAI API key
|
||||
"tests/test_distil.py"
|
||||
"tests/test_new_client.py"
|
||||
"tests/llm/"
|
||||
];
|
||||
|
||||
|
||||
588
pkgs/development/python-modules/jiter/Cargo.lock
generated
Normal file
588
pkgs/development/python-modules/jiter/Cargo.lock
generated
Normal file
@ -0,0 +1,588 @@
|
||||
# This file is automatically @generated by Cargo.
|
||||
# It is not intended for manual editing.
|
||||
version = 3
|
||||
|
||||
[[package]]
|
||||
name = "ahash"
|
||||
version = "0.8.11"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "e89da841a80418a9b391ebaea17f5c112ffaaa96f621d2c285b5174da76b9011"
|
||||
dependencies = [
|
||||
"cfg-if",
|
||||
"getrandom",
|
||||
"once_cell",
|
||||
"version_check",
|
||||
"zerocopy",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "arbitrary"
|
||||
version = "1.3.2"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "7d5a26814d8dcb93b0e5a0ff3c6d80a8843bafb21b39e8e18a6f05471870e110"
|
||||
|
||||
[[package]]
|
||||
name = "autocfg"
|
||||
version = "1.3.0"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "0c4b4d0bd25bd0b74681c0ad21497610ce1b7c91b1022cd21c80c6fbdd9476b0"
|
||||
|
||||
[[package]]
|
||||
name = "bencher"
|
||||
version = "0.1.5"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "7dfdb4953a096c551ce9ace855a604d702e6e62d77fac690575ae347571717f5"
|
||||
|
||||
[[package]]
|
||||
name = "bitvec"
|
||||
version = "1.0.1"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "1bc2832c24239b0141d5674bb9174f9d68a8b5b3f2753311927c172ca46f7e9c"
|
||||
dependencies = [
|
||||
"funty",
|
||||
"radium",
|
||||
"tap",
|
||||
"wyz",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "cc"
|
||||
version = "1.0.104"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "74b6a57f98764a267ff415d50a25e6e166f3831a5071af4995296ea97d210490"
|
||||
dependencies = [
|
||||
"jobserver",
|
||||
"libc",
|
||||
"once_cell",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "cfg-if"
|
||||
version = "1.0.0"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "baf1de4339761588bc0619e3cbc0120ee582ebb74b53b4efbf79117bd2da40fd"
|
||||
|
||||
[[package]]
|
||||
name = "codspeed"
|
||||
version = "2.6.0"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "3a104ac948e0188b921eb3fcbdd55dcf62e542df4c7ab7e660623f6288302089"
|
||||
dependencies = [
|
||||
"colored",
|
||||
"libc",
|
||||
"serde_json",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "codspeed-bencher-compat"
|
||||
version = "2.6.0"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "ceaba84ea2634603a0f199c07fa39ff4dda61f89a3f9149fb89b035bc317b671"
|
||||
dependencies = [
|
||||
"bencher",
|
||||
"codspeed",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "colored"
|
||||
version = "2.1.0"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "cbf2150cce219b664a8a70df7a1f933836724b503f8a413af9365b4dcc4d90b8"
|
||||
dependencies = [
|
||||
"lazy_static",
|
||||
"windows-sys",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "equivalent"
|
||||
version = "1.0.1"
|
||||
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||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "2b38e32f0abccf9987a4e3079dfb67dcd799fb61361e53e2882c3cbaf0d905d8"
|
||||
|
||||
[[package]]
|
||||
name = "windows_aarch64_msvc"
|
||||
version = "0.48.5"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "dc35310971f3b2dbbf3f0690a219f40e2d9afcf64f9ab7cc1be722937c26b4bc"
|
||||
|
||||
[[package]]
|
||||
name = "windows_i686_gnu"
|
||||
version = "0.48.5"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "a75915e7def60c94dcef72200b9a8e58e5091744960da64ec734a6c6e9b3743e"
|
||||
|
||||
[[package]]
|
||||
name = "windows_i686_msvc"
|
||||
version = "0.48.5"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "8f55c233f70c4b27f66c523580f78f1004e8b5a8b659e05a4eb49d4166cca406"
|
||||
|
||||
[[package]]
|
||||
name = "windows_x86_64_gnu"
|
||||
version = "0.48.5"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "53d40abd2583d23e4718fddf1ebec84dbff8381c07cae67ff7768bbf19c6718e"
|
||||
|
||||
[[package]]
|
||||
name = "windows_x86_64_gnullvm"
|
||||
version = "0.48.5"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "0b7b52767868a23d5bab768e390dc5f5c55825b6d30b86c844ff2dc7414044cc"
|
||||
|
||||
[[package]]
|
||||
name = "windows_x86_64_msvc"
|
||||
version = "0.48.5"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "ed94fce61571a4006852b7389a063ab983c02eb1bb37b47f8272ce92d06d9538"
|
||||
|
||||
[[package]]
|
||||
name = "wyz"
|
||||
version = "0.5.1"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "05f360fc0b24296329c78fda852a1e9ae82de9cf7b27dae4b7f62f118f77b9ed"
|
||||
dependencies = [
|
||||
"tap",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "zerocopy"
|
||||
version = "0.7.35"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "1b9b4fd18abc82b8136838da5d50bae7bdea537c574d8dc1a34ed098d6c166f0"
|
||||
dependencies = [
|
||||
"zerocopy-derive",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "zerocopy-derive"
|
||||
version = "0.7.35"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "fa4f8080344d4671fb4e831a13ad1e68092748387dfc4f55e356242fae12ce3e"
|
||||
dependencies = [
|
||||
"proc-macro2",
|
||||
"quote",
|
||||
"syn",
|
||||
]
|
||||
51
pkgs/development/python-modules/jiter/default.nix
Normal file
51
pkgs/development/python-modules/jiter/default.nix
Normal file
@ -0,0 +1,51 @@
|
||||
{
|
||||
lib,
|
||||
buildPythonPackage,
|
||||
rustPlatform,
|
||||
fetchFromGitHub,
|
||||
libiconv,
|
||||
dirty-equals,
|
||||
pytestCheckHook,
|
||||
}:
|
||||
|
||||
buildPythonPackage rec {
|
||||
pname = "jiter";
|
||||
version = "0.5.0";
|
||||
pyproject = true;
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "pydantic";
|
||||
repo = "jiter";
|
||||
rev = "refs/tags/v${version}";
|
||||
hash = "sha256-EgovddXbwutLaVkosdbJ2Y3BpEms+RoeaO8ghBRNdio=";
|
||||
};
|
||||
|
||||
postPatch = ''
|
||||
cp ${./Cargo.lock} Cargo.lock
|
||||
'';
|
||||
|
||||
cargoDeps = rustPlatform.importCargoLock { lockFile = ./Cargo.lock; };
|
||||
|
||||
buildAndTestSubdir = "crates/jiter-python";
|
||||
|
||||
nativeBuildInputs = [ rustPlatform.cargoSetupHook ];
|
||||
|
||||
build-system = [ rustPlatform.maturinBuildHook ];
|
||||
|
||||
buildInputs = [ libiconv ];
|
||||
|
||||
pythonImportsCheck = [ "jiter" ];
|
||||
|
||||
nativeCheckInputs = [
|
||||
dirty-equals
|
||||
pytestCheckHook
|
||||
];
|
||||
|
||||
meta = {
|
||||
description = "Fast iterable JSON parser";
|
||||
homepage = "https://github.com/pydantic/jiter/";
|
||||
changelog = "https://github.com/pydantic/jiter/releases/tag/v${version}";
|
||||
license = lib.licenses.mit;
|
||||
maintainers = with lib.maintainers; [ natsukium ];
|
||||
};
|
||||
}
|
||||
@ -21,6 +21,8 @@ buildPythonPackage rec {
|
||||
|
||||
nativeBuildInputs = [ setuptools ];
|
||||
|
||||
pythonRelaxDeps = [ "psutil" ];
|
||||
|
||||
propagatedBuildInputs = [
|
||||
pandocfilters
|
||||
psutil
|
||||
|
||||
@ -42,6 +42,8 @@ buildPythonPackage rec {
|
||||
|
||||
build-system = [ poetry-core ];
|
||||
|
||||
pythonRelaxDeps = [ "fastapi" ];
|
||||
|
||||
dependencies = [
|
||||
fastapi
|
||||
injector
|
||||
|
||||
@ -31,14 +31,14 @@
|
||||
|
||||
buildPythonPackage rec {
|
||||
pname = "thinc";
|
||||
version = "9.0.0";
|
||||
version = "8.2.3";
|
||||
format = "setuptools";
|
||||
|
||||
disabled = pythonOlder "3.7";
|
||||
|
||||
src = fetchPypi {
|
||||
inherit pname version;
|
||||
hash = "sha256-u+f8PcpPK4miwUKei/HJ3CCw+q0T8KwpBTu7PCUxrVc=";
|
||||
hash = "sha256-9a/FIikSqAvai9zslYNiorpTjXAn3I22FUhF0oWdynY=";
|
||||
};
|
||||
|
||||
postPatch = ''
|
||||
|
||||
@ -2865,8 +2865,12 @@ self: super: with self; {
|
||||
|
||||
dbglib = callPackage ../development/python-modules/dbglib { };
|
||||
|
||||
dbt-adapters = callPackage ../development/python-modules/dbt-adapters { };
|
||||
|
||||
dbt-bigquery = callPackage ../development/python-modules/dbt-bigquery { };
|
||||
|
||||
dbt-common = callPackage ../development/python-modules/dbt-common { };
|
||||
|
||||
dbt-core = callPackage ../development/python-modules/dbt-core { };
|
||||
|
||||
dbt-extractor = callPackage ../development/python-modules/dbt-extractor { };
|
||||
@ -6184,6 +6188,8 @@ self: super: with self; {
|
||||
|
||||
jishaku = callPackage ../development/python-modules/jishaku { };
|
||||
|
||||
jiter = callPackage ../development/python-modules/jiter { };
|
||||
|
||||
jiwer = callPackage ../development/python-modules/jiwer { };
|
||||
|
||||
jmespath = callPackage ../development/python-modules/jmespath { };
|
||||
|
||||
Loading…
Reference in New Issue
Block a user