mirror of
https://github.com/NixOS/nixpkgs.git
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jasp-desktop: format with nixfmt
This commit is contained in:
TomaSajt
parent
b2c1f10bfb
commit
5a2806141a
@ -1,8 +1,9 @@
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{ R
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, rPackages
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, fetchFromGitHub
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, jasp-src
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, jasp-version
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{
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R,
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rPackages,
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fetchFromGitHub,
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jasp-src,
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jasp-version,
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}:
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with rPackages;
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@ -21,7 +22,18 @@ let
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src = jasp-src;
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sourceRoot = "${jasp-src.name}/Engine/jaspGraphs";
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propagatedBuildInputs = [ ggplot2 gridExtra gtable lifecycle jsonlite R6 RColorBrewer rlang scales viridisLite ];
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propagatedBuildInputs = [
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ggplot2
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gridExtra
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gtable
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lifecycle
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jsonlite
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R6
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RColorBrewer
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rlang
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scales
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viridisLite
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];
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};
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jaspBase = buildRPackage {
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@ -41,7 +53,31 @@ let
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cp -r --no-preserve=all ${jaspColumnEncoder-src} inst/include/jaspColumnEncoder
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'';
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propagatedBuildInputs = [ cli codetools ggplot2 gridExtra gridGraphics jaspGraphs jsonlite lifecycle modules officer pkgbuild plyr qgraph ragg R6 Rcpp renv remotes rjson rvg svglite systemfonts withr ];
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propagatedBuildInputs = [
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cli
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codetools
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ggplot2
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gridExtra
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gridGraphics
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jaspGraphs
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jsonlite
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lifecycle
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modules
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officer
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pkgbuild
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plyr
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qgraph
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ragg
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R6
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Rcpp
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renv
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remotes
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rjson
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rvg
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svglite
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systemfonts
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withr
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];
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};
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stanova = buildRPackage {
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@ -52,7 +88,13 @@ let
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rev = "988ad8e07cda1674b881570a85502be7795fbd4e";
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hash = "sha256-tAeHqTHao2KVRNFBDWmuF++H31aNN6O1ss1Io500QBY=";
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};
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propagatedBuildInputs = [ emmeans lme4 coda rstan MASS ];
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propagatedBuildInputs = [
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emmeans
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lme4
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coda
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rstan
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MASS
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];
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};
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bstats = buildRPackage {
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@ -63,7 +105,11 @@ let
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rev = "42d34c18df08d233825bae34fdc0dfa0cd70ce8c";
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hash = "sha256-N2KmbTPbyvzsZTWBRE2x7bteccnzokUWDOB4mOWUdJk=";
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};
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propagatedBuildInputs = [ hypergeo purrr SuppDists ];
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propagatedBuildInputs = [
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hypergeo
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purrr
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SuppDists
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];
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};
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flexplot = buildRPackage {
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@ -74,7 +120,25 @@ let
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rev = "4223ad5fb56028018b964d6f9f5aa5bac8710821";
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hash = "sha256-L+Ed2bIWjq3ZIAGookp8dAjDSeldEbcwynwFVVZ9IcU=";
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};
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propagatedBuildInputs = [ cowplot MASS tibble withr dplyr magrittr forcats purrr plyr R6 ggplot2 patchwork ggsci lme4 party mgcv rlang ];
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propagatedBuildInputs = [
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cowplot
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MASS
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tibble
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withr
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dplyr
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magrittr
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forcats
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purrr
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plyr
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R6
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ggplot2
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patchwork
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ggsci
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lme4
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party
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mgcv
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rlang
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];
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};
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# conting has been removed from CRAN
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@ -86,52 +150,443 @@ let
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rev = "03a4eb9a687e015d602022a01d4e638324c110c8";
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hash = "sha256-Sp09YZz1WGyefn31Zy1qGufoKjtuEEZHO+wJvoLArf0=";
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};
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propagatedBuildInputs = [ mvtnorm gtools tseries coda ];
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propagatedBuildInputs = [
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mvtnorm
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gtools
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tseries
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coda
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];
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};
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buildJaspModule = name: deps: buildRPackage {
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name = "${name}-${jasp-version}";
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version = jasp-version;
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src = jasp-src;
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sourceRoot = "${jasp-src.name}/Modules/${name}";
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propagatedBuildInputs = deps;
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};
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buildJaspModule =
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name: deps:
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buildRPackage {
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name = "${name}-${jasp-version}";
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version = jasp-version;
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src = jasp-src;
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sourceRoot = "${jasp-src.name}/Modules/${name}";
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propagatedBuildInputs = deps;
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};
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in
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{
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engine = { inherit jaspBase jaspGraphs; };
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engine = {
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inherit jaspBase jaspGraphs;
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};
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modules = rec {
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jaspAcceptanceSampling = buildJaspModule "jaspAcceptanceSampling" [ abtest BayesFactor conting' ggplot2 jaspBase jaspGraphs plyr stringr vcd vcdExtra AcceptanceSampling ];
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jaspAnova = buildJaspModule "jaspAnova" [ afex BayesFactor boot car colorspace emmeans ggplot2 jaspBase jaspDescriptives jaspGraphs jaspTTests KernSmooth matrixStats multcomp onewaytests plyr stringi stringr restriktor ];
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jaspAudit = buildJaspModule "jaspAudit" [ bstats extraDistr ggplot2 ggrepel jaspBase jaspGraphs jfa ];
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jaspBain = buildJaspModule "jaspBain" [ bain lavaan ggplot2 semPlot stringr jaspBase jaspGraphs jaspSem ];
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jaspBsts = buildJaspModule "jaspBsts" [ Boom bsts ggplot2 jaspBase jaspGraphs matrixStats reshape2 ];
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jaspCircular = buildJaspModule "jaspCircular" [ jaspBase jaspGraphs circular ggplot2 ];
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jaspCochrane = buildJaspModule "jaspCochrane" [ jaspBase jaspGraphs jaspDescriptives jaspMetaAnalysis ];
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jaspDescriptives = buildJaspModule "jaspDescriptives" [ ggplot2 ggrepel jaspBase jaspGraphs ];
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jaspDistributions = buildJaspModule "jaspDistributions" [ car fitdistrplus ggplot2 goftest gnorm jaspBase jaspGraphs MASS sgt sn ];
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jaspEquivalenceTTests = buildJaspModule "jaspEquivalenceTTests" [ BayesFactor ggplot2 jaspBase jaspGraphs metaBMA TOSTER jaspTTests ];
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jaspFactor = buildJaspModule "jaspFactor" [ ggplot2 jaspBase jaspGraphs jaspSem lavaan psych qgraph reshape2 semPlot GPArotation Rcsdp semTools ];
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jaspFrequencies = buildJaspModule "jaspFrequencies" [ abtest BayesFactor conting' multibridge ggplot2 jaspBase jaspGraphs plyr stringr vcd vcdExtra ];
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jaspJags = buildJaspModule "jaspJags" [ coda ggplot2 ggtext hexbin jaspBase jaspGraphs rjags scales stringr ];
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jaspLearnBayes = buildJaspModule "jaspLearnBayes" [ extraDistr ggplot2 HDInterval jaspBase jaspGraphs MASS MCMCpack MGLM scales ggalluvial ragg runjags ggdist png posterior ];
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jaspLearnStats = buildJaspModule "jaspLearnStats" [ extraDistr ggplot2 jaspBase jaspGraphs jaspDistributions jaspDescriptives jaspTTests ggforce tidyr igraph ];
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jaspMachineLearning = buildJaspModule "jaspMachineLearning" [ kknn AUC cluster colorspace DALEX dbscan e1071 fpc gbm Gmedian ggparty ggdendro ggnetwork ggplot2 ggrepel ggridges glmnet jaspBase jaspGraphs MASS mvnormalTest neuralnet network partykit plyr randomForest rpart ROCR Rtsne signal ];
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jaspMetaAnalysis = buildJaspModule "jaspMetaAnalysis" [ dplyr ggplot2 jaspBase jaspGraphs MASS metaBMA metafor psych purrr rstan stringr tibble tidyr weightr BayesTools RoBMA metamisc ggmcmc pema ];
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jaspMixedModels = buildJaspModule "jaspMixedModels" [ afex emmeans ggplot2 ggpol jaspBase jaspGraphs lme4 loo mgcv rstan rstanarm stanova withr ];
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jaspNetwork = buildJaspModule "jaspNetwork" [ bootnet BDgraph corpcor dplyr foreach ggplot2 gtools HDInterval huge IsingSampler jaspBase jaspGraphs mvtnorm qgraph reshape2 snow stringr ];
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jaspPower = buildJaspModule "jaspPower" [ pwr jaspBase jaspGraphs ];
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jaspPredictiveAnalytics = buildJaspModule "jaspPredictiveAnalytics" [ jaspBase jaspGraphs bsts bssm precrec reshape2 Boom lubridate prophet BART EBMAforecast imputeTS ];
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jaspProcess = buildJaspModule "jaspProcess" [ dagitty ggplot2 ggraph jaspBase jaspGraphs ];
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jaspProphet = buildJaspModule "jaspProphet" [ rstan ggplot2 jaspBase jaspGraphs prophet scales ];
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jaspQualityControl = buildJaspModule "jaspQualityControl" [ car cowplot daewr desirability DoE_base EnvStats FAdist fitdistrplus FrF2 ggplot2 ggrepel goftest ggpp irr jaspBase jaspDescriptives jaspGraphs mle_tools psych qcc rsm Rspc tidyr tibble vipor weibullness ];
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jaspRegression = buildJaspModule "jaspRegression" [ BAS boot bstats combinat emmeans ggplot2 ggrepel hmeasure jaspAnova jaspBase jaspDescriptives jaspGraphs jaspTTests lmtest logistf MASS matrixStats mdscore ppcor purrr Rcpp statmod VGAM ];
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jaspReliability = buildJaspModule "jaspReliability" [ Bayesrel coda ggplot2 ggridges irr jaspBase jaspGraphs LaplacesDemon lme4 MASS psych ];
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jaspRobustTTests = buildJaspModule "jaspRobustTTests" [ RoBTT ggplot2 jaspBase jaspGraphs ];
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jaspSem = buildJaspModule "jaspSem" [ forcats ggplot2 jaspBase jaspGraphs lavaan cSEM reshape2 semPlot semTools stringr tibble tidyr ];
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jaspSummaryStatistics = buildJaspModule "jaspSummaryStatistics" [ BayesFactor bstats jaspBase jaspFrequencies jaspGraphs jaspRegression jaspTTests jaspAnova jaspDescriptives SuppDists bayesplay ];
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jaspSurvival = buildJaspModule "jaspSurvival" [ survival survminer jaspBase jaspGraphs ];
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jaspTTests = buildJaspModule "jaspTTests" [ BayesFactor car ggplot2 jaspBase jaspGraphs logspline plotrix plyr ];
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jaspTimeSeries = buildJaspModule "jaspTimeSeries" [ jaspBase jaspGraphs forecast ];
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jaspVisualModeling = buildJaspModule "jaspVisualModeling" [ flexplot jaspBase jaspGraphs ];
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jaspAcceptanceSampling = buildJaspModule "jaspAcceptanceSampling" [
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abtest
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BayesFactor
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conting'
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ggplot2
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jaspBase
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jaspGraphs
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plyr
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stringr
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vcd
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vcdExtra
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AcceptanceSampling
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];
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jaspAnova = buildJaspModule "jaspAnova" [
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afex
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BayesFactor
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boot
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car
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colorspace
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emmeans
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ggplot2
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jaspBase
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jaspDescriptives
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jaspGraphs
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jaspTTests
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KernSmooth
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matrixStats
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multcomp
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onewaytests
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plyr
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stringi
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stringr
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restriktor
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];
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jaspAudit = buildJaspModule "jaspAudit" [
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bstats
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extraDistr
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ggplot2
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ggrepel
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jaspBase
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jaspGraphs
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jfa
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];
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jaspBain = buildJaspModule "jaspBain" [
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bain
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lavaan
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ggplot2
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semPlot
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stringr
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jaspBase
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jaspGraphs
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jaspSem
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];
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jaspBsts = buildJaspModule "jaspBsts" [
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Boom
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bsts
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ggplot2
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jaspBase
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jaspGraphs
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matrixStats
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reshape2
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];
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jaspCircular = buildJaspModule "jaspCircular" [
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jaspBase
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jaspGraphs
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circular
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ggplot2
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];
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jaspCochrane = buildJaspModule "jaspCochrane" [
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jaspBase
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jaspGraphs
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jaspDescriptives
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jaspMetaAnalysis
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];
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jaspDescriptives = buildJaspModule "jaspDescriptives" [
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ggplot2
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ggrepel
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jaspBase
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jaspGraphs
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];
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jaspDistributions = buildJaspModule "jaspDistributions" [
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car
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fitdistrplus
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ggplot2
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goftest
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gnorm
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jaspBase
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jaspGraphs
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MASS
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sgt
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sn
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];
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jaspEquivalenceTTests = buildJaspModule "jaspEquivalenceTTests" [
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BayesFactor
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ggplot2
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jaspBase
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jaspGraphs
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metaBMA
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TOSTER
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jaspTTests
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];
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jaspFactor = buildJaspModule "jaspFactor" [
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ggplot2
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jaspBase
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jaspGraphs
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jaspSem
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lavaan
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psych
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qgraph
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reshape2
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semPlot
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GPArotation
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Rcsdp
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semTools
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];
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jaspFrequencies = buildJaspModule "jaspFrequencies" [
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abtest
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BayesFactor
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conting'
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multibridge
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ggplot2
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jaspBase
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jaspGraphs
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plyr
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stringr
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vcd
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vcdExtra
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];
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jaspJags = buildJaspModule "jaspJags" [
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coda
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ggplot2
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ggtext
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hexbin
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jaspBase
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jaspGraphs
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rjags
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scales
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stringr
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];
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jaspLearnBayes = buildJaspModule "jaspLearnBayes" [
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extraDistr
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ggplot2
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HDInterval
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jaspBase
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jaspGraphs
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MASS
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MCMCpack
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MGLM
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scales
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ggalluvial
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ragg
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runjags
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ggdist
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png
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posterior
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];
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jaspLearnStats = buildJaspModule "jaspLearnStats" [
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extraDistr
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ggplot2
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jaspBase
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jaspGraphs
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jaspDistributions
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jaspDescriptives
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jaspTTests
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ggforce
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tidyr
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igraph
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];
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jaspMachineLearning = buildJaspModule "jaspMachineLearning" [
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kknn
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AUC
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cluster
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colorspace
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DALEX
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dbscan
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e1071
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fpc
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gbm
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Gmedian
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ggparty
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ggdendro
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ggnetwork
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ggplot2
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ggrepel
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ggridges
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glmnet
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jaspBase
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jaspGraphs
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MASS
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mvnormalTest
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neuralnet
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network
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partykit
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plyr
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randomForest
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rpart
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ROCR
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Rtsne
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signal
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];
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jaspMetaAnalysis = buildJaspModule "jaspMetaAnalysis" [
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dplyr
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ggplot2
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jaspBase
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jaspGraphs
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MASS
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metaBMA
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metafor
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psych
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purrr
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rstan
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stringr
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tibble
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tidyr
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weightr
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BayesTools
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RoBMA
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metamisc
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ggmcmc
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pema
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];
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jaspMixedModels = buildJaspModule "jaspMixedModels" [
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afex
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emmeans
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ggplot2
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ggpol
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jaspBase
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jaspGraphs
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lme4
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loo
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mgcv
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rstan
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rstanarm
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stanova
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withr
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];
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jaspNetwork = buildJaspModule "jaspNetwork" [
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bootnet
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BDgraph
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corpcor
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dplyr
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foreach
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ggplot2
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gtools
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HDInterval
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huge
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IsingSampler
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jaspBase
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jaspGraphs
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mvtnorm
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qgraph
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reshape2
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snow
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stringr
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];
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jaspPower = buildJaspModule "jaspPower" [
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pwr
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jaspBase
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jaspGraphs
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];
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jaspPredictiveAnalytics = buildJaspModule "jaspPredictiveAnalytics" [
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jaspBase
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jaspGraphs
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bsts
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bssm
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precrec
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reshape2
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Boom
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lubridate
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prophet
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BART
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EBMAforecast
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imputeTS
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];
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jaspProcess = buildJaspModule "jaspProcess" [
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dagitty
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ggplot2
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ggraph
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jaspBase
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jaspGraphs
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];
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jaspProphet = buildJaspModule "jaspProphet" [
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rstan
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ggplot2
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jaspBase
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jaspGraphs
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prophet
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scales
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];
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jaspQualityControl = buildJaspModule "jaspQualityControl" [
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car
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cowplot
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daewr
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desirability
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DoE_base
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EnvStats
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FAdist
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fitdistrplus
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||||
FrF2
|
||||
ggplot2
|
||||
ggrepel
|
||||
goftest
|
||||
ggpp
|
||||
irr
|
||||
jaspBase
|
||||
jaspDescriptives
|
||||
jaspGraphs
|
||||
mle_tools
|
||||
psych
|
||||
qcc
|
||||
rsm
|
||||
Rspc
|
||||
tidyr
|
||||
tibble
|
||||
vipor
|
||||
weibullness
|
||||
];
|
||||
jaspRegression = buildJaspModule "jaspRegression" [
|
||||
BAS
|
||||
boot
|
||||
bstats
|
||||
combinat
|
||||
emmeans
|
||||
ggplot2
|
||||
ggrepel
|
||||
hmeasure
|
||||
jaspAnova
|
||||
jaspBase
|
||||
jaspDescriptives
|
||||
jaspGraphs
|
||||
jaspTTests
|
||||
lmtest
|
||||
logistf
|
||||
MASS
|
||||
matrixStats
|
||||
mdscore
|
||||
ppcor
|
||||
purrr
|
||||
Rcpp
|
||||
statmod
|
||||
VGAM
|
||||
];
|
||||
jaspReliability = buildJaspModule "jaspReliability" [
|
||||
Bayesrel
|
||||
coda
|
||||
ggplot2
|
||||
ggridges
|
||||
irr
|
||||
jaspBase
|
||||
jaspGraphs
|
||||
LaplacesDemon
|
||||
lme4
|
||||
MASS
|
||||
psych
|
||||
];
|
||||
jaspRobustTTests = buildJaspModule "jaspRobustTTests" [
|
||||
RoBTT
|
||||
ggplot2
|
||||
jaspBase
|
||||
jaspGraphs
|
||||
];
|
||||
jaspSem = buildJaspModule "jaspSem" [
|
||||
forcats
|
||||
ggplot2
|
||||
jaspBase
|
||||
jaspGraphs
|
||||
lavaan
|
||||
cSEM
|
||||
reshape2
|
||||
semPlot
|
||||
semTools
|
||||
stringr
|
||||
tibble
|
||||
tidyr
|
||||
];
|
||||
jaspSummaryStatistics = buildJaspModule "jaspSummaryStatistics" [
|
||||
BayesFactor
|
||||
bstats
|
||||
jaspBase
|
||||
jaspFrequencies
|
||||
jaspGraphs
|
||||
jaspRegression
|
||||
jaspTTests
|
||||
jaspAnova
|
||||
jaspDescriptives
|
||||
SuppDists
|
||||
bayesplay
|
||||
];
|
||||
jaspSurvival = buildJaspModule "jaspSurvival" [
|
||||
survival
|
||||
survminer
|
||||
jaspBase
|
||||
jaspGraphs
|
||||
];
|
||||
jaspTTests = buildJaspModule "jaspTTests" [
|
||||
BayesFactor
|
||||
car
|
||||
ggplot2
|
||||
jaspBase
|
||||
jaspGraphs
|
||||
logspline
|
||||
plotrix
|
||||
plyr
|
||||
];
|
||||
jaspTimeSeries = buildJaspModule "jaspTimeSeries" [
|
||||
jaspBase
|
||||
jaspGraphs
|
||||
forecast
|
||||
];
|
||||
jaspVisualModeling = buildJaspModule "jaspVisualModeling" [
|
||||
flexplot
|
||||
jaspBase
|
||||
jaspGraphs
|
||||
];
|
||||
};
|
||||
}
|
||||
|
||||
@ -1,19 +1,20 @@
|
||||
{ lib
|
||||
, stdenv
|
||||
, fetchFromGitHub
|
||||
, callPackage
|
||||
, buildEnv
|
||||
, linkFarm
|
||||
, substituteAll
|
||||
, R
|
||||
, rPackages
|
||||
, cmake
|
||||
, ninja
|
||||
, pkg-config
|
||||
, boost
|
||||
, libarchive
|
||||
, readstat
|
||||
, qt6
|
||||
{
|
||||
lib,
|
||||
stdenv,
|
||||
fetchFromGitHub,
|
||||
callPackage,
|
||||
buildEnv,
|
||||
linkFarm,
|
||||
substituteAll,
|
||||
R,
|
||||
rPackages,
|
||||
cmake,
|
||||
ninja,
|
||||
pkg-config,
|
||||
boost,
|
||||
libarchive,
|
||||
readstat,
|
||||
qt6,
|
||||
}:
|
||||
|
||||
let
|
||||
@ -27,10 +28,14 @@ let
|
||||
fetchSubmodules = true;
|
||||
};
|
||||
|
||||
inherit (callPackage ./modules.nix {
|
||||
jasp-src = src;
|
||||
jasp-version = version;
|
||||
}) engine modules;
|
||||
inherit
|
||||
(callPackage ./modules.nix {
|
||||
jasp-src = src;
|
||||
jasp-version = version;
|
||||
})
|
||||
engine
|
||||
modules
|
||||
;
|
||||
|
||||
# Merges ${R}/lib/R with all used R packages (even propagated ones)
|
||||
customREnv = buildEnv {
|
||||
@ -42,8 +47,12 @@ let
|
||||
] ++ lib.attrValues modules;
|
||||
};
|
||||
|
||||
modulesDir = linkFarm "jasp-${version}-modules"
|
||||
(lib.mapAttrsToList (name: drv: { name = name; path = "${drv}/library"; }) modules);
|
||||
modulesDir = linkFarm "jasp-${version}-modules" (
|
||||
lib.mapAttrsToList (name: drv: {
|
||||
name = name;
|
||||
path = "${drv}/library";
|
||||
}) modules
|
||||
);
|
||||
in
|
||||
stdenv.mkDerivation {
|
||||
pname = "jasp-desktop";
|
||||
@ -76,18 +85,20 @@ stdenv.mkDerivation {
|
||||
qt6.wrapQtAppsHook
|
||||
];
|
||||
|
||||
buildInputs = [
|
||||
customREnv
|
||||
boost
|
||||
libarchive
|
||||
readstat
|
||||
] ++ (with qt6; [
|
||||
qtbase
|
||||
qtdeclarative
|
||||
qtwebengine
|
||||
qtsvg
|
||||
qt5compat
|
||||
]);
|
||||
buildInputs =
|
||||
[
|
||||
customREnv
|
||||
boost
|
||||
libarchive
|
||||
readstat
|
||||
]
|
||||
++ (with qt6; [
|
||||
qtbase
|
||||
qtdeclarative
|
||||
qtwebengine
|
||||
qtsvg
|
||||
qt5compat
|
||||
]);
|
||||
|
||||
env.NIX_LDFLAGS = "-L${rPackages.RInside}/library/RInside/lib";
|
||||
|
||||
@ -121,4 +132,3 @@ stdenv.mkDerivation {
|
||||
platforms = lib.platforms.linux;
|
||||
};
|
||||
}
|
||||
|
||||
|
||||
Loading…
Reference in New Issue
Block a user