Merge staging-next into staging

nixos/modules/services/misc/gitlab.nix

@@ -901,6 +901,16 @@ in {
         '';
       };
 
+      sidekiq.concurrency = mkOption {
+        type = with types; nullOr int;
+        default = null;
+        description = lib.mdDoc ''
+          How many processor threads to use for processing sidekiq background job queues. When null, the GitLab default is used.
+
+          See <https://docs.gitlab.com/ee/administration/sidekiq/extra_sidekiq_processes.html#manage-thread-counts-explicitly> for details.
+        '';
+      };
+
       sidekiq.memoryKiller.enable = mkOption {
         type = types.bool;
         default = true;
@@ -1454,12 +1464,17 @@ in {
         TimeoutSec = "infinity";
         Restart = "always";
         WorkingDirectory = "${cfg.packages.gitlab}/share/gitlab";
-        ExecStart = utils.escapeSystemdExecArgs [
-          "${cfg.packages.gitlab}/share/gitlab/bin/sidekiq-cluster"
-          "-e" "production"
-          "-r" "."
-          "*" # all queue groups
-        ];
+        ExecStart = utils.escapeSystemdExecArgs (
+          [
+            "${cfg.packages.gitlab}/share/gitlab/bin/sidekiq-cluster"
+            "*" # all queue groups
+          ] ++ lib.optionals (cfg.sidekiq.concurrency != null) [
+            "--concurrency" (toString cfg.sidekiq.concurrency)
+          ] ++ [
+            "--environment" "production"
+            "--require" "."
+          ]
+        );
       };
     };
 

nixos/tests/gitlab.nix

@@ -89,6 +89,10 @@ in {
           dbFile = pkgs.writeText "dbsecret" "we2quaeZ";
           jwsFile = pkgs.runCommand "oidcKeyBase" {} "${pkgs.openssl}/bin/openssl genrsa 2048 > $out";
         };
+
+        # reduce memory usage
+        sidekiq.concurrency = 1;
+        puma.workers = 2;
       };
     };
   };

pkgs/applications/audio/musescore/default.nix

@@ -1,7 +1,6 @@
 { stdenv
 , lib
 , fetchFromGitHub
-, fetchpatch
 , cmake
 , wrapQtAppsHook
 , pkg-config
@@ -129,7 +128,7 @@ in stdenv'.mkDerivation (finalAttrs: {
     mkdir -p "$out/Applications"
     mv "$out/mscore.app" "$out/Applications/mscore.app"
     mkdir -p $out/bin
-    ln -s $out/Applications/mscore.app/Contents/MacOS/mscore $out/bin/mscore.
+    ln -s $out/Applications/mscore.app/Contents/MacOS/mscore $out/bin/mscore
   '';
 
   # Don't run bundled upstreams tests, as they require a running X window system.
@@ -143,5 +142,6 @@ in stdenv'.mkDerivation (finalAttrs: {
     license = licenses.gpl3Only;
     maintainers = with maintainers; [ vandenoever doronbehar ];
     mainProgram = "mscore";
+    platforms = platforms.unix;
   };
 })

pkgs/applications/misc/cherrytree/default.nix

@@ -20,13 +20,13 @@
 
 stdenv.mkDerivation rec {
   pname = "cherrytree";
-  version = "1.0.4";
+  version = "1.1.0";
 
   src = fetchFromGitHub {
     owner = "giuspen";
     repo = "cherrytree";
     rev = "refs/tags/v${version}";
-    hash = "sha256-SMx3a0pzhNahRzmenZwPQPCBgqoBGo9n3RcNcimNGBE=";
+    hash = "sha256-YoHaWc/olJrbV1A4hqDgYOLVlpHBrgI0x2TFr9oeqh4=";
   };
 
   nativeBuildInputs = [
@@ -66,5 +66,6 @@ stdenv.mkDerivation rec {
     changelog = "https://raw.githubusercontent.com/giuspen/cherrytree/${version}/changelog.txt";
     license = licenses.gpl3Plus;
     maintainers = with maintainers; [ ];
+    platforms = platforms.unix;
   };
 }

pkgs/applications/networking/browsers/microsoft-edge/browser.nix

@@ -22,6 +22,7 @@
 , expat
 , libdrm
 , libxkbcommon
+, pipewire
 , gtk3
 , pango
 , cairo
@@ -81,7 +82,7 @@ stdenv.mkDerivation rec {
         xorg.libxcb cups.lib dbus.lib expat libdrm
         xorg.libXcomposite xorg.libXdamage xorg.libXext
         xorg.libXfixes xorg.libXrandr libxkbcommon
-        gtk3 pango cairo gdk-pixbuf mesa
+        pipewire gtk3 pango cairo gdk-pixbuf mesa
         alsa-lib at-spi2-core xorg.libxshmfence systemd wayland
       ];
       naclHelper = lib.makeLibraryPath [

pkgs/applications/networking/cluster/fn-cli/default.nix

@@ -2,13 +2,13 @@
 
 buildGoModule rec {
   pname = "fn";
-  version = "0.6.30";
+  version = "0.6.31";
 
   src = fetchFromGitHub {
     owner = "fnproject";
     repo = "cli";
     rev = version;
-    hash = "sha256-1j0Hd/SYoBhelCIFUFxkByczWSYFXjTE9TVH9E3Km+Y=";
+    hash = "sha256-tL5mygomRdxHdWUAp6umMOhyKq/ZFcjn+5wZcqD2mVA=";
   };
 
   vendorHash = null;

pkgs/development/python-modules/distrax/default.nix

@@ -82,5 +82,8 @@ buildPythonPackage rec {
     homepage = "https://github.com/deepmind/distrax";
     license = licenses.asl20;
     maintainers = with maintainers; [ onny ];
+    # Several tests fail with:
+    # AssertionError: [Chex] Assertion assert_type failed: Error in type compatibility check
+    broken = true;
   };
 }

pkgs/development/python-modules/equinox/default.nix

@@ -47,6 +47,11 @@ buildPythonPackage rec {
 
   pythonImportsCheck = [ "equinox" ];
 
+  disabledTests = [
+    # Failed: DID NOT WARN. No warnings of type (<class 'UserWarning'>,) were emitted.
+    "test_tracetime"
+  ];
+
   meta = with lib; {
     description = "A JAX library based around a simple idea: represent parameterised functions (such as neural networks) as PyTrees";
     changelog = "https://github.com/patrick-kidger/equinox/releases/tag/v${version}";

pkgs/development/python-modules/flax/default.nix

@@ -25,16 +25,16 @@
 
 buildPythonPackage rec {
   pname = "flax";
-  version = "0.8.1";
+  version = "0.8.2";
   pyproject = true;
 
-  disabled = pythonOlder "3.8";
+  disabled = pythonOlder "3.9";
 
   src = fetchFromGitHub {
     owner = "google";
     repo = "flax";
     rev = "refs/tags/v${version}";
-    hash = "sha256-3UzMSJoKw+V1WLBJ+Zf7aF7CDNBsvWnRUfNgb3K4v1A=";
+    hash = "sha256-UABgJGe1grUSkwOJpjeIoFqhXsqG//HlC1YyYPxXV+g=";
   };
 
   nativeBuildInputs = [
@@ -87,6 +87,7 @@ buildPythonPackage rec {
     # `tensorflow_datasets`, `vocabulary`) so the benefits of trying to run them
     # would be limited anyway.
     "examples/*"
+    "flax/experimental/nnx/examples/*"
     # See https://github.com/google/flax/issues/3232.
     "tests/jax_utils_test.py"
     # Requires tree

pkgs/development/python-modules/optax/default.nix

@@ -1,6 +1,7 @@
 { lib
 , absl-py
 , buildPythonPackage
+, flit-core
 , chex
 , fetchFromGitHub
 , jaxlib
@@ -11,16 +12,16 @@
 
 buildPythonPackage rec {
   pname = "optax";
-  version = "0.2.1";
-  format = "setuptools";
+  version = "0.2.2";
+  pyproject = true;
 
-  disabled = pythonOlder "3.7";
+  disabled = pythonOlder "3.9";
 
   src = fetchFromGitHub {
     owner = "deepmind";
-    repo = pname;
+    repo = "optax";
     rev = "refs/tags/v${version}";
-    hash = "sha256-vimsVZV5Z11euLxsu998pMQZ0hG3xl96D3h9iONtl/E=";
+    hash = "sha256-sBiKUuQR89mttc9Njrh1aeUJOYdlcF7Nlj3/+Y7OMb4=";
   };
 
   outputs = [
@@ -28,6 +29,10 @@ buildPythonPackage rec {
     "testsout"
   ];
 
+  nativeBuildInputs = [
+    flit-core
+  ];
+
   buildInputs = [
     jaxlib
   ];

pkgs/development/tools/database/atlas/default.nix

@@ -2,13 +2,13 @@
 
 buildGoModule rec {
   pname = "atlas";
-  version = "0.20.0";
+  version = "0.21.0";
 
   src = fetchFromGitHub {
     owner = "ariga";
     repo = "atlas";
     rev = "v${version}";
-    hash = "sha256-PQPf3cHlKP+0PIOkR/SZ4f9sBv+gJ+bJuJl9/OLRpb0=";
+    hash = "sha256-YgZX06BbtI1zf2Z4boyLos6pARzmCtOgJhrQqSZzRS4=";
   };
 
   modRoot = "cmd/atlas";

pkgs/servers/monitoring/telegraf/default.nix

@@ -8,7 +8,7 @@
 
 buildGoModule rec {
   pname = "telegraf";
-  version = "1.30.0";
+  version = "1.30.1";
 
   subPackages = [ "cmd/telegraf" ];
 
@@ -16,10 +16,10 @@ buildGoModule rec {
     owner = "influxdata";
     repo = "telegraf";
     rev = "v${version}";
-    hash = "sha256-+dQMQsieer0/BfvAKnT35bjNjPjC0Z1houUqFBVIWDE=";
+    hash = "sha256-cBEPNPeezh4X817Iq8Bo41/KX58I9HL2GA0lAU7+ISE=";
   };
 
-  vendorHash = "sha256-6RfhSrb9mTt2IzEv3zzj26gChz7XKV5uazfwanNe7Pc=";
+  vendorHash = "sha256-jTw5YLGgHs3uvihI6KPZg+cNrnNixUznJsH0CtIVe6I=";
   proxyVendor = true;
 
   ldflags = [

pkgs/tools/misc/mutagen/default.nix

@@ -1,4 +1,4 @@
-{ lib, buildGoModule, fetchFromGitHub, fetchzip }:
+{ lib, buildGoModule, fetchFromGitHub, fetchzip, installShellFiles }:
 
 buildGoModule rec {
   pname = "mutagen";
@@ -24,6 +24,8 @@ buildGoModule rec {
     hash = "sha256-RFB1/gzLjs9w8mebEd4M9Ldv3BrLIj2RsN/QAIJi45E=";
   };
 
+  nativeBuildInputs = [ installShellFiles ];
+
   doCheck = false;
 
   subPackages = [ "cmd/mutagen" "cmd/mutagen-agent" ];
@@ -33,6 +35,17 @@ buildGoModule rec {
   postInstall = ''
     install -d $out/libexec
     ln -s ${agents}/mutagen-agents.tar.gz $out/libexec/
+
+    $out/bin/mutagen generate \
+      --bash-completion-script mutagen.bash \
+      --fish-completion-script mutagen.fish \
+      --zsh-completion-script mutagen.zsh
+
+    installShellCompletion \
+      --cmd mutagen \
+      --bash mutagen.bash \
+      --fish mutagen.fish \
+      --zsh mutagen.zsh
   '';
 
   meta = with lib; {

pkgs/tools/package-management/nfpm/default.nix

@@ -8,16 +8,16 @@
 
 buildGoModule rec {
   pname = "nfpm";
-  version = "2.35.3";
+  version = "2.36.1";
 
   src = fetchFromGitHub {
     owner = "goreleaser";
     repo = pname;
     rev = "v${version}";
-    hash = "sha256-QoZiI9rMOdQZbMENVcBfUYPAvN9IqfeR0EK11l8+Hzo=";
+    hash = "sha256-arGTZ7GFM1kQdryPrwklY7S0B9i31eQ/MaR24mRaFAo=";
   };
 
-  vendorHash = "sha256-WYuhHLq0/OD/JtOEkZsyPEJyjPqEoh9RSfBG0G3E/2w=";
+  vendorHash = "sha256-g57tLk2+WWcdG0COqkQD7eLYG0TdC0RnlhLF6Qt4woY=";
 
   ldflags = [ "-s" "-w" "-X main.version=${version}" ];
 

pkgs/top-level/all-packages.nix

@@ -13649,9 +13649,7 @@ with pkgs;
 
   teip = callPackage ../tools/text/teip { };
 
-  telegraf = callPackage ../servers/monitoring/telegraf {
-    buildGoModule = buildGo122Module;
-  };
+  telegraf = callPackage ../servers/monitoring/telegraf { };
 
   teleport_12 = callPackage ../servers/teleport/12 {
     inherit (darwin.apple_sdk.frameworks) CoreFoundation Security AppKit;