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Merge pull request #75416 from jbedo/bedtools

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bedtools: 2.29.0 -> 2.29.1
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markuskowa 2019-12-10 23:58:03 +01:00 committed by GitHub
commit 3922a30090
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1 changed files with 6 additions and 5 deletions
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pkgs/applications/science/biology/bedtools/default.nix
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@ -2,19 +2,20 @@
stdenv.mkDerivation rec {
pname = "bedtools";
version = "2.29.0";
version = "2.29.1";
src = fetchFromGitHub {
owner = "arq5x";
repo = "bedtools2";
rev = "v${version}";
sha256 = "0d6i985qqxp92ddq4n6558m70qi5rqhl724wrfys0hm0p6a9h56x";
sha256 = "1vbpjvzl4ppzkan9qgm84bkn9kl3h3m5xz92y18wn1sksxcdq50x";
};
buildInputs = [ zlib python bzip2 lzma ];
cc = if stdenv.cc.isClang then "clang++" else "g++";
buildPhase = "make prefix=$out SHELL=${stdenv.shell} CXX=${cc} -j $NIX_BUILD_CORES";
installPhase = "make prefix=$out SHELL=${stdenv.shell} CXX=${cc} install";
cxx = if stdenv.cc.isClang then "clang++" else "g++";
cc = if stdenv.cc.isClang then "clang" else "gcc";
buildPhase = "make prefix=$out SHELL=${stdenv.shell} CXX=${cxx} CC=${cc} -j $NIX_BUILD_CORES";
installPhase = "make prefix=$out SHELL=${stdenv.shell} CXX=${cxx} CC=${cc} install";
meta = with stdenv.lib; {
description = "A powerful toolset for genome arithmetic.";