Merge pull request #176349 from fabaff/aesara-bump

python310Packages.aesara: 2.6.6 -> 2.7.1, python310Packages.pymc: unstable-2022-05-23 -> 4.0.0

pkgs/development/python-modules/aeppl/default.nix

@@ -42,6 +42,11 @@ buildPythonPackage rec {
     "aeppl"
   ];
 
+  disabledTests = [
+    # Compute issue
+    "test_initial_values"
+  ];
+
   meta = with lib; {
     description = "Library for an Aesara-based PPL";
     homepage = "https://github.com/aesara-devs/aeppl";

pkgs/development/python-modules/aesara/default.nix

@@ -19,7 +19,7 @@
 
 buildPythonPackage rec {
   pname = "aesara";
-  version = "2.6.6";
+  version = "2.7.1";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -28,7 +28,7 @@ buildPythonPackage rec {
     owner = "aesara-devs";
     repo = "aesara";
     rev = "refs/tags/rel-${version}";
-    hash = "sha256-ChLMQCXw9EBR0hnNYGdkUbiLF+4oCqOxzsKsnsf22Jk=";
+    hash = "sha256-qjAaW7YYmzGBNpc8T5RyOdP5evkKOdzUGzQ9JXKioxw=";
   };
 
   nativeBuildInputs = [

pkgs/development/python-modules/pymc/default.nix

@@ -9,24 +9,29 @@
 , fetchFromGitHub
 , numpy
 , pythonOlder
+, pythonRelaxDepsHook
 , scipy
 , typing-extensions
 }:
 
 buildPythonPackage rec {
-  pname = "pymc3";
-  version = "unstable-2022-05-23";
+  pname = "pymc";
+  version = "4.0.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
 
   src = fetchFromGitHub {
     owner = "pymc-devs";
-    repo = "pymc3";
-    rev = "b5a5b569779673914c9420c1cc0135b118505ff5";
-    hash = "sha256-vkIFwdjX2Rex8oqscVMP4xh0K4bjmN/RL7aQmOI//Dw=";
+    repo = "pymc";
+    rev = "v${version}";
+    hash = "sha256-ZMuDQJ+bmrQlrem/OqU/hIie3ZQkAqayU3N8ZtaW7xo=";
   };
 
+  nativeBuildInputs = [
+    pythonRelaxDepsHook
+  ];
+
   propagatedBuildInputs = [
     aeppl
     aesara
@@ -42,11 +47,13 @@ buildPythonPackage rec {
   postPatch = ''
     substituteInPlace setup.py \
       --replace ', "pytest-cov"' ""
-    substituteInPlace requirements.txt \
-      --replace "aesara==2.6.2" "aesara" \
-      --replace "aeppl==0.0.28" "aeppl"
   '';
 
+  pythonRelaxDeps = [
+    "aesara"
+    "aeppl"
+  ];
+
   # The test suite is computationally intensive and test failures are not
   # indicative for package usability hence tests are disabled by default.
   doCheck = false;

pkgs/top-level/python-aliases.nix

@@ -112,6 +112,7 @@ mapAliases ({
   pyGtkGlade = throw "Glade support for pygtk has been removed"; # added 2022-01-15
   pycallgraph = throw "pycallgraph has been removed, it was using setuptools 2to3 translation feature, which has been removed in setuptools 58"; # added 2022-01-18
   pylibgen = throw "pylibgen is unmaintained upstreamed, and removed from nixpkgs"; # added 2020-06-20
+  pymc3 = pymc; # added 2022-06-05, module was rename starting with 4.0.0
   pymssql = throw "pymssql has been abandoned upstream."; # added 2020-05-04
   pyreadability = readability-lxml; # added 2022-05-24
   pysmart-smartx = pysmart; # added 2021-10-22

pkgs/top-level/python-packages.nix

@@ -7606,7 +7606,7 @@ in {
 
   pymbolic = callPackage ../development/python-modules/pymbolic { };
 
-  pymc3 = callPackage ../development/python-modules/pymc3 { };
+  pymc = callPackage ../development/python-modules/pymc { };
 
   pymdstat = callPackage ../development/python-modules/pymdstat { };