2021-05-08 13:45:03 +00:00
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{ stdenv, lib, R, libcxx, xvfb-run, util-linux, Cocoa, Foundation, gettext, gfortran }:
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2014-05-04 21:54:11 +00:00
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2018-08-02 16:06:36 +00:00
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{ name, buildInputs ? [], requireX ? false, ... } @ attrs:
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2014-05-04 21:54:11 +00:00
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2015-02-19 20:49:41 +00:00
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stdenv.mkDerivation ({
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2018-03-14 22:58:20 +00:00
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buildInputs = buildInputs ++ [R gettext] ++
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2021-05-08 13:45:03 +00:00
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lib.optionals requireX [util-linux xvfb-run] ++
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2021-01-17 18:11:59 +00:00
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lib.optionals stdenv.isDarwin [Cocoa Foundation gfortran];
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2015-06-29 00:42:31 +00:00
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NIX_CFLAGS_COMPILE =
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llvmPackages: Multuple outputs for everythting
Also begin to start work on cross compilation, though that will have to
be finished later.
The patches are based on the first version of
https://reviews.llvm.org/D99484. It's very annoying to do the
back-porting but the review has uncovered nothing super major so I'm
fine sticking with what I've got.
Beyond making the outputs work, I also strove to re-sync the packages,
as they have been drifting pointlessly apart for some time.
----
Other misc notes, highly incomplete
- lvm-config-native and llvm-config are put in `dev` because they are
tools just for build time.
- Clang no longer has an lld dep. That was introduced in
db29857eb391ed002046090851a44c452b80bdbd, but if clang needs help
finding lld when it is used we should just pass it flags / put in the
resource dir. Providing it at build time increases critical path
length for no good reason.
----
A note on `nativeCC`:
`stdenv` takes tools from the previous stage, so:
1. `pkgsBuildBuild`: `(?1, x, x)`
2. `pkgsBuildBuild.stdenv.cc`: `(?0, ?1, x)`
while:
1. `pkgsBuildBuild`: `(?1, x, x)`
2. `pkgsBuildBuild.targetPackages`: `(x, x, ?2)`
3. `pkgsBuildBuild.targetPackages.stdenv.cc`: `(?1, x, x)`
2020-10-15 08:23:57 +00:00
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lib.optionalString stdenv.isDarwin "-I${lib.getDev libcxx}/include/c++/v1";
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2014-05-04 21:54:11 +00:00
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2022-03-25 15:35:37 +00:00
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hardeningDisable = lib.optionals (stdenv.isAarch64 && stdenv.isDarwin) [ "stackprotector" ];
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2014-05-04 21:54:11 +00:00
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configurePhase = ''
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runHook preConfigure
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export R_LIBS_SITE="$R_LIBS_SITE''${R_LIBS_SITE:+:}$out/library"
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runHook postConfigure
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'';
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buildPhase = ''
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runHook preBuild
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runHook postBuild
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'';
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2014-11-24 06:29:56 +00:00
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installFlags = if attrs.doCheck or true then
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[]
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2014-11-21 13:23:36 +00:00
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else
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2014-11-24 06:29:56 +00:00
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[ "--no-test-load" ];
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2014-11-21 13:23:36 +00:00
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2018-08-02 16:06:36 +00:00
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rCommand = if requireX then
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2014-11-21 13:23:36 +00:00
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# Unfortunately, xvfb-run has a race condition even with -a option, so that
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# we acquire a lock explicitly.
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2021-05-08 13:45:03 +00:00
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"flock ${xvfb-run} xvfb-run -a -e xvfb-error R"
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2014-11-21 13:23:36 +00:00
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else
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"R";
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2014-05-04 21:54:11 +00:00
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installPhase = ''
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runHook preInstall
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mkdir -p $out/library
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2021-11-17 11:10:51 +00:00
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$rCommand CMD INSTALL --built-timestamp='1970-01-01 00:00:00 UTC' $installFlags --configure-args="$configureFlags" -l $out/library .
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2014-05-04 21:54:11 +00:00
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runHook postInstall
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'';
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postFixup = ''
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2017-11-17 18:26:21 +00:00
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if test -e $out/nix-support/propagated-build-inputs; then
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ln -s $out/nix-support/propagated-build-inputs $out/nix-support/propagated-user-env-packages
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2014-05-04 21:54:11 +00:00
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fi
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'';
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2014-11-24 06:29:56 +00:00
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checkPhase = ''
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# noop since R CMD INSTALL tests packages
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'';
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2014-05-04 22:32:45 +00:00
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} // attrs // {
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name = "r-" + name;
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})
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