mirror of
https://github.com/PAMGuard/PAMGuard.git
synced 2024-11-25 08:32:32 +00:00
4f87b7b661
A lot of refactoring of Nilus wrappers with more useful Objects for PAMGUard to work with.
975 lines
31 KiB
XML
975 lines
31 KiB
XML
<project xmlns="http://maven.apache.org/POM/4.0.0"
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xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
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xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
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<modelVersion>4.0.0</modelVersion>
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<groupId>org.pamguard</groupId>
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<artifactId>Pamguard</artifactId>
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<version>2.02.11d</version>
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<name>Pamguard</name>
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<description>Pamguard using Maven to control dependencies</description>
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<url>www.pamguard.org</url>
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<organization>
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<name>Sea Mammal Research Unit, University of St. Andrews</name>
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<url>http://www.smru.st-andrews.ac.uk</url>
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</organization>
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<properties>
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<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
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<javafx.version>21</javafx.version>
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<maven.compiler.source>11</maven.compiler.source>
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<maven.compiler.target>11</maven.compiler.target>
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<!-- Tethys version control -->
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<jaxb.runtime.version>2.4.0-b180830.0438</jaxb.runtime.version>
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<jaxb.api.version>2.4.0-b180830.0359</jaxb.api.version>
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<jaxb.xjc.version>2.4.0-b180830.0438</jaxb.xjc.version>
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</properties>
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<build>
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<!-- Define where the source and test directories are -->
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<sourceDirectory>${basedir}/src</sourceDirectory>
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<testSourceDirectory>${basedir}/src/test</testSourceDirectory> <!-- where the Unit tets are located -->
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<resources>
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<resource>
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<directory>src</directory>
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<excludes>
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<exclude>META-INF/*.SF,META-INF/*.DSA,META-INF/*.RSA</exclude>
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<exclude>**/*.java</exclude> <!-- don't include any source files -->
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<exclude>jars/*.*</exclude> <!-- don't include files in the jars folder -->
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</excludes>
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</resource>
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</resources>
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<plugins>
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<!-- original maven compiler definition - uses the JRE's javac compiler, not the one Eclipse uses
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<artifactId>maven-compiler-plugin</artifactId>
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<version>3.8.0</version>
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<configuration>
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<release>13</release>
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</configuration>
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-->
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<!-- attempt to use the Eclipse JDT compiler, so that the errors match when building
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https://stackoverflow.com/questions/38070326/java-generics-compiler-error-not-shown-in-eclipse
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https://wiki.eclipse.org/JDT/FAQ#Can_I_use_JDT_outside_Eclipse_to_compile_Java_code.3F
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https://wiki.eclipse.org/Tycho/FAQ#Can_I_use_the_Tycho_compiler_support_in_non-OSGi_projects.2C_too.3F
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-->
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<plugin>
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<groupId>org.apache.maven.plugins</groupId>
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<artifactId>maven-compiler-plugin</artifactId>
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<version>3.12.1</version>
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<configuration>
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<!-- set compiler to use Java version 11 API https://docs.oracle.com/javase/9/tools/javac.htm#JSWOR627 -->
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<release>21</release>
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<compilerId>jdt</compilerId>
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</configuration>
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<dependencies>
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<!-- https://mvnrepository.com/artifact/org.eclipse.tycho/tycho-compiler-jdt -->
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<dependency>
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<groupId>org.eclipse.tycho</groupId>
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<artifactId>tycho-compiler-jdt</artifactId>
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<version>1.5.1</version>
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</dependency>
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</dependencies>
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</plugin>
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<!-- Set up javafx properly. -->
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<plugin>
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<groupId>org.openjfx</groupId>
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<artifactId>javafx-maven-plugin</artifactId>
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<version>0.0.8</version>
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</plugin>
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<!-- Maven Shade plugin - for creating the uberjar / fatjar -->
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<!-- see http://maven.apache.org/plugins/maven-shade-plugin/index.html for details -->
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<plugin>
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<groupId>org.apache.maven.plugins</groupId>
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<artifactId>maven-shade-plugin</artifactId>
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<version>3.2.1</version>
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<configuration>
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<transformers>
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<transformer implementation="org.apache.maven.plugins.shade.resource.ServicesResourceTransformer" />
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</transformers>
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<filters>
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<!-- Moved these filters up to here from where they were int <executions><execution><configurtion>
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based on advice at https://stackoverflow.com/questions/34738653/maven-shade-plugin-does-not-exclude-the-manifest-signature-files
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and the are now working -->
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<filter>
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<artifact>*:*</artifact>
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<excludes>
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<exclude>META-INF/*.SF</exclude> <!-- get rid of manifests from library jars - also done in orig ant build file -->
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<exclude>META-INF/*.DSA</exclude>
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<exclude>META-INF/*.RSA</exclude>
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<exclude>test/resources/**</exclude><!-- get rid of deep learning moduels and wav files used for unit tests -->
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</excludes>
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</filter>
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</filters>
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</configuration>
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<executions>
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<execution>
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<phase>package</phase>
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<goals>
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<goal>shade</goal>
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</goals>
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<configuration>
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<transformers>
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<transformer implementation="org.apache.maven.plugins.shade.resource.ManifestResourceTransformer">
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<manifestEntries>
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<Main-Class>pamguard.Pamguard</Main-Class>
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<Class-Path>.</Class-Path> <!-- this is from the orig ant build file -->
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<SplashScreen-Image>Resources/pgBlankSplash.png</SplashScreen-Image> <!-- this is from the orig ant build file -->
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</manifestEntries>
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</transformer>
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<transformer implementation="org.apache.maven.plugins.shade.resource.ServicesResourceTransformer" />
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</transformers>
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</configuration>
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</execution>
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</executions>
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</plugin>
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<!-- The Maven-JDEPS plugin, to analyze necessary JDK dependencies. See
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this site for details: https://maven.apache.org/plugins/maven-jdeps-plugin/index.html -->
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<plugin>
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<groupId>com.github.marschall</groupId>
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<artifactId>jdeps-maven-plugin</artifactId>
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<version>0.5.1</version>
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</plugin>
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<!-- The Maven dependency plugin, which can copy all dependencies into a temp folder for jdeps analysis -->
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<plugin>
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<groupId>org.apache.maven.plugins</groupId>
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<artifactId>maven-dependency-plugin</artifactId>
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<version>3.1.1</version>
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<executions>
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<execution>
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<id>copy-dependencies</id>
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<phase>package</phase>
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<goals>
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<goal>copy-dependencies</goal>
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</goals>
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<configuration>
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<outputDirectory>${project.build.directory}/tempDependencies</outputDirectory>
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<overWriteReleases>false</overWriteReleases>
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<overWriteSnapshots>false</overWriteSnapshots>
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<overWriteIfNewer>true</overWriteIfNewer>
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</configuration>
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</execution>
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<!-- this deletes all the dependencies in the local repository and downloads them again.
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Run a Maven > Update after doing this in order to properly reset the dependencies. Also, you
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will need to add the 3 jar files (x3, JasioHost and jave) back into the local repository after
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running this command -->
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<!-- I'm not sure why, but every time I try to run the shade:shade build to create a
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fatjar it first runs this, which deletes all of the dependencies and completely fails.
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I think it has something to do with the lifecycle mapping, but that's beyond my Maven
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abilities right now.
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I can't even remember why I added this in the first place, so I'm going to comment
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it out
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<execution>
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<id>purge-local-dependencies</id>
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<phase>process-sources</phase>
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<goals>
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<goal>purge-local-repository</goal>
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</goals>
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<configuration>
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</configuration>
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</execution>
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-->
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</executions>
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</plugin>
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</plugins>
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<pluginManagement>
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<plugins>
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<!--This plugin's configuration is used to store Eclipse m2e settings only. It has no influence on the Maven build itself.-->
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<plugin>
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<groupId>org.eclipse.m2e</groupId>
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<artifactId>lifecycle-mapping</artifactId>
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<version>1.0.0</version>
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<configuration>
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<lifecycleMappingMetadata>
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<pluginExecutions>
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<pluginExecution>
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<pluginExecutionFilter>
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<groupId>
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org.apache.maven.plugins
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</groupId>
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<artifactId>
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maven-dependency-plugin
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</artifactId>
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<versionRange>
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[3.1.1,)
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</versionRange>
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<goals>
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<goal>
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purge-local-repository
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</goal>
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</goals>
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</pluginExecutionFilter>
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<action>
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<ignore></ignore>
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</action>
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</pluginExecution>
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</pluginExecutions>
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</lifecycleMappingMetadata>
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</configuration>
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</plugin>
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</plugins>
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</pluginManagement>
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</build>
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<reporting>
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<plugins>
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<plugin>
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<groupId>com.github.marschall</groupId>
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<artifactId>jdeps-maven-plugin</artifactId>
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<version>0.5.1</version>
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</plugin>
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</plugins>
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</reporting>
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<!-- ************************* Extra Repositories ************************************* -->
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<repositories>
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<!-- Project repo to hold the custom jar files that are not available in Maven. Do
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this so that we don't have to do the extra step of manually installing jar files in the local repo -->
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<repository>
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<id>repo</id>
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<releases>
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<enabled>true</enabled>
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<checksumPolicy>ignore</checksumPolicy>
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</releases>
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<snapshots>
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<enabled>false</enabled>
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</snapshots>
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<url>file://${project.basedir}/repo</url>
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</repository>
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<!-- Repo for netCDF -->
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<repository>
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<snapshots>
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<enabled>false</enabled>
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</snapshots>
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<id>unidata-all</id>
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<name>Unidata netCDF</name>
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<url>https://artifacts.unidata.ucar.edu/repository/unidata-all/</url>
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</repository>
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<!--
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<repository>
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<snapshots>
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<enabled>false</enabled>
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</snapshots>
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<id>geomajas</id>
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<name>geomajas</name>
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<url>http://maven.geomajas.org/</url>
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</repository>-->
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<!-- Repo for Renjin Script Engine -->
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<repository>
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<id>bedatadriven</id>
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<name>bedatadriven public repo</name>
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<url>https://nexus.bedatadriven.com/content/groups/public/</url>
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</repository>
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<repository>
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<snapshots>
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<enabled>false</enabled>
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</snapshots>
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<id>talan</id>
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<name>talan</name>
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<url>https://nexus.talanlabs.com/content/repositories/releases/</url>
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</repository>
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<repository>
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<id>central</id>
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<url>https://repo1.maven.org/maven2</url>
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</repository>
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</repositories>
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<!-- ************************* Dependencies ************************************* -->
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<dependencies>
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<!--jpam project - utilities -->
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<dependency>
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<groupId>io.github.macster110</groupId>
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<artifactId>jpamutils</artifactId>
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<version>0.0.59</version>
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</dependency>
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<!--jpam project - Deep learning java library -->
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<dependency>
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<groupId>io.github.macster110</groupId>
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<artifactId>jdl4pam</artifactId>
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<version>0.0.99b</version>
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</dependency>
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<!-- https://mvnrepository.com/artifact/gov.nist.math/jama -->
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<dependency>
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<groupId>gov.nist.math</groupId>
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<artifactId>jama</artifactId>
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<version>1.0.3</version>
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</dependency>
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<!-- https://mvnrepository.com/artifact/org.openjfx/javafx-controls -->
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<!-- IMPORTANT - IF MAVEN IS NOT DOWNLOADING THE JAVAFX FILES AND
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INSTEAD THROWING AN ERROR, IT MIGHT BE BECAUSE THERE IS AN
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INTERFERENCE WITH JAMIE'S REPOSITORY. I'm not sure why this happens,
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but it does. To fix, comment out the repository (in
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the <repositories> section above, let Maven download the JavaFX
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files, and then uncomment the repository again. -->
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<dependency>
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<groupId>org.openjfx</groupId>
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<artifactId>javafx-controls</artifactId>
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<version>${javafx.version}</version>
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</dependency>
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<!-- https://mvnrepository.com/artifact/org.openjfx/javafx-swing -->
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<!-- IMPORTANT - IF MAVEN IS NOT DOWNLOADING THE JAVAFX FILES AND
|
|
INSTEAD THROWING AN ERROR, IT MIGHT BE BECAUSE THERE IS AN
|
|
INTERFERENCE WITH JAMIE'S REPOSITORY. I'm not sure why this happens,
|
|
but it does. To fix, comment out the repository (in
|
|
the <repositories> section above, let Maven download the JavaFX
|
|
files, and then uncomment the repository again. -->
|
|
<dependency>
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<groupId>org.openjfx</groupId>
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<artifactId>javafx-swing</artifactId>
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<version>${javafx.version}</version>
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</dependency>
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|
|
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<!-- https://mvnrepository.com/artifact/org.openjfx/javafx-media -->
|
|
<!-- IMPORTANT - IF MAVEN IS NOT DOWNLOADING THE JAVAFX FILES AND
|
|
INSTEAD THROWING AN ERROR, IT MIGHT BE BECAUSE THERE IS AN
|
|
INTERFERENCE WITH JAMIE'S REPOSITORY. I'm not sure why this happens,
|
|
but it does. To fix, comment out the repository (in
|
|
the <repositories> section above, let Maven download the JavaFX
|
|
files, and then uncomment the repository again. -->
|
|
<dependency>
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<groupId>org.openjfx</groupId>
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<artifactId>javafx-media</artifactId>
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<version>${javafx.version}</version>
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</dependency>
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<!-- https://mvnrepository.com/artifact/org.openjfx/javafx-web -->
|
|
<!-- IMPORTANT - IF MAVEN IS NOT DOWNLOADING THE JAVAFX FILES AND
|
|
INSTEAD THROWING AN ERROR, IT MIGHT BE BECAUSE THERE IS AN
|
|
INTERFERENCE WITH JAMIE'S REPOSITORY. I'm not sure why this happens,
|
|
but it does. To fix, comment out the repository (in
|
|
the <repositories> section above, let Maven download the JavaFX
|
|
files, and then uncomment the repository again. -->
|
|
<dependency>
|
|
<groupId>org.openjfx</groupId>
|
|
<artifactId>javafx-web</artifactId>
|
|
<version>${javafx.version}</version>
|
|
</dependency>
|
|
|
|
<!-- Decorates JavaFX components with error icons if inputs are incorrect-->
|
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<dependency>
|
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<groupId>net.synedra</groupId>
|
|
<artifactId>validatorfx</artifactId>
|
|
<version>0.4.2</version>
|
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</dependency>
|
|
|
|
<!-- https://mvnrepository.com/artifact/org.apache.commons/commons-compress -->
|
|
<dependency>
|
|
<groupId>org.apache.commons</groupId>
|
|
<artifactId>commons-compress</artifactId>
|
|
<version>1.19</version>
|
|
</dependency>
|
|
|
|
<!-- https://mvnrepository.com/artifact/org.apache.commons/commons-csv -->
|
|
<dependency>
|
|
<groupId>org.apache.commons</groupId>
|
|
<artifactId>commons-csv</artifactId>
|
|
<version>1.7</version>
|
|
</dependency>
|
|
|
|
<!-- https://mvnrepository.com/artifact/commons-io/commons-io -->
|
|
<dependency>
|
|
<groupId>commons-io</groupId>
|
|
<artifactId>commons-io</artifactId>
|
|
<version>2.6</version>
|
|
</dependency>
|
|
|
|
<!-- https://mvnrepository.com/artifact/org.apache.commons/commons-lang3 -->
|
|
<dependency>
|
|
<groupId>org.apache.commons</groupId>
|
|
<artifactId>commons-lang3</artifactId>
|
|
<version>3.9</version>
|
|
</dependency>
|
|
|
|
<!-- https://mvnrepository.com/artifact/org.apache.commons/commons-math3 -->
|
|
<dependency>
|
|
<groupId>org.apache.commons</groupId>
|
|
<artifactId>commons-math3</artifactId>
|
|
<version>3.6.1</version>
|
|
</dependency>
|
|
|
|
<!-- https://mvnrepository.com/artifact/org.apache.commons/commons-math -->
|
|
<dependency>
|
|
<groupId>org.apache.commons</groupId>
|
|
<artifactId>commons-math</artifactId>
|
|
<version>2.2</version>
|
|
</dependency>
|
|
|
|
<!-- https://mvnrepository.com/artifact/commons-net/commons-net -->
|
|
<dependency>
|
|
<groupId>commons-net</groupId>
|
|
<artifactId>commons-net</artifactId>
|
|
<version>3.6</version>
|
|
</dependency>
|
|
|
|
<!-- https://mvnrepository.com/artifact/org.controlsfx/controlsfx -->
|
|
<dependency>
|
|
<groupId>org.controlsfx</groupId>
|
|
<artifactId>controlsfx</artifactId>
|
|
<version>11.2.0</version>
|
|
<exclusions>
|
|
<exclusion>
|
|
<groupId>org.openjfx</groupId>
|
|
<artifactId>javafx-base</artifactId>
|
|
</exclusion>
|
|
<exclusion>
|
|
<groupId>org.openjfx</groupId>
|
|
<artifactId>javafx-controls</artifactId>
|
|
</exclusion>
|
|
<exclusion>
|
|
<groupId>org.openjfx</groupId>
|
|
<artifactId>javafx-graphics</artifactId>
|
|
</exclusion>
|
|
<exclusion>
|
|
<groupId>org.openjfx</groupId>
|
|
<artifactId>javafx-media</artifactId>
|
|
</exclusion>
|
|
<exclusion>
|
|
<groupId>org.openjfx</groupId>
|
|
<artifactId>javafx-web</artifactId>
|
|
</exclusion>
|
|
</exclusions>
|
|
</dependency>
|
|
|
|
<!-- https://search.maven.org/artifact/org.kordamp.ikonli/ikonli-javafx/12.2.0/jar -->
|
|
<!-- Icon symbol pack to replace FontAwesome. This is the core library, and the
|
|
actual symbol packs need to be added separately (see below) -->
|
|
<dependency>
|
|
<groupId>org.kordamp.ikonli</groupId>
|
|
<artifactId>ikonli-javafx</artifactId>
|
|
<version>12.3.1</version>
|
|
</dependency>
|
|
|
|
<!-- Icon symbol pack for swing icons . -->
|
|
<dependency>
|
|
<groupId>org.kordamp.ikonli</groupId>
|
|
<artifactId>ikonli-swing</artifactId>
|
|
<version>12.3.1</version>
|
|
</dependency>
|
|
|
|
<!-- Ikonli MaterialDesign2 (Latest) font pack https://kordamp.org/ikonli/cheat-sheet-materialdesign2.html -->
|
|
<dependency>
|
|
<groupId>org.kordamp.ikonli</groupId>
|
|
<artifactId>ikonli-materialdesign2-pack</artifactId>
|
|
<version>12.3.1</version>
|
|
</dependency>
|
|
|
|
<!-- Ikonli File Icons (Latest) font pack https://kordamp.org/ikonli/cheat-sheet-materialdesign2.html -->
|
|
<dependency>
|
|
<groupId>org.kordamp.ikonli</groupId>
|
|
<artifactId>ikonli-fileicons-pack</artifactId>
|
|
<version>12.3.1</version>
|
|
</dependency>
|
|
|
|
<!-- https://mvnrepository.com/artifact/net.sf.geographiclib/GeographicLib-Java
|
|
Used in the video range module-->
|
|
<dependency>
|
|
<groupId>net.sf.geographiclib</groupId>
|
|
<artifactId>GeographicLib-Java</artifactId>
|
|
<version>1.50</version>
|
|
</dependency>
|
|
|
|
<!-- https://mvnrepository.com/artifact/org.jogamp.gluegen/gluegen
|
|
<dependency>
|
|
<groupId>org.jogamp.gluegen</groupId>
|
|
<artifactId>gluegen-rt-main</artifactId>
|
|
<version>2.3.2</version>
|
|
</dependency>-->
|
|
|
|
|
|
<!-- https://mvnrepository.com/artifact/com.healthmarketscience.jackcess/jackcess
|
|
<dependency>
|
|
<groupId>com.healthmarketscience.jackcess</groupId>
|
|
<artifactId>jackcess</artifactId>
|
|
<version>3.0.1</version>
|
|
</dependency>-->
|
|
|
|
<!-- https://mvnrepository.com/artifact/com.fasterxml.jackson.core/jackson-databind -->
|
|
<dependency>
|
|
<groupId>com.fasterxml.jackson.core</groupId>
|
|
<artifactId>jackson-databind</artifactId>
|
|
<version>2.10.1</version>
|
|
</dependency>
|
|
|
|
<!-- https://mvnrepository.com/artifact/org.jogamp.jogl/jogl-all-main
|
|
<dependency>
|
|
<groupId>org.jogamp.jogl</groupId>
|
|
<artifactId>jogl-all-main</artifactId>
|
|
<version>2.3.2</version>
|
|
</dependency>-->
|
|
|
|
<!-- NOT SURE IF WE NEED THE JAXB LIBRARIES HERE - NO ERRORS WHEN REMOVED
|
|
<dependency>
|
|
<groupId>javax.xml.bind</groupId>
|
|
<artifactId>jaxb-api</artifactId>
|
|
<version>2.3.1</version>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>org.glassfish.jaxb</groupId>
|
|
<artifactId>jaxb-core</artifactId>
|
|
<version>2.3.0.1</version>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>com.sun.xml.bind</groupId>
|
|
<artifactId>jaxb-impl</artifactId>
|
|
<version>2.3.2</version>
|
|
</dependency>
|
|
-->
|
|
|
|
<!-- https://mvnrepository.com/artifact/org.jflac/jflac-codec -->
|
|
<dependency>
|
|
<groupId>org.jflac</groupId>
|
|
<artifactId>jflac-codec</artifactId>
|
|
<version>1.5.2</version>
|
|
</dependency>
|
|
|
|
<!-- https://mvnrepository.com/artifact/javax.help/javahelp -->
|
|
<dependency>
|
|
<groupId>javax.help</groupId>
|
|
<artifactId>javahelp</artifactId>
|
|
<version>2.0.05</version>
|
|
</dependency>
|
|
|
|
<!-- https://mvnrepository.com/artifact/net.java.dev.jna/jna -->
|
|
<dependency>
|
|
<groupId>net.java.dev.jna</groupId>
|
|
<artifactId>jna</artifactId>
|
|
<version>5.5.0</version>
|
|
</dependency>
|
|
|
|
<!-- https://mvnrepository.com/artifact/net.java.dev.jna/jna-platform -->
|
|
<dependency>
|
|
<groupId>net.java.dev.jna</groupId>
|
|
<artifactId>jna-platform</artifactId>
|
|
<version>5.5.0</version>
|
|
</dependency>
|
|
|
|
<!-- https://mvnrepository.com/artifact/com.jcraft/jsch -->
|
|
<dependency>
|
|
<groupId>com.jcraft</groupId>
|
|
<artifactId>jsch</artifactId>
|
|
<version>0.1.55</version>
|
|
</dependency>
|
|
|
|
<!-- https://mvnrepository.com/artifact/com.fazecast/jSerialComm -->
|
|
<dependency>
|
|
<groupId>com.fazecast</groupId>
|
|
<artifactId>jSerialComm</artifactId>
|
|
<version>2.5.3</version>
|
|
</dependency>
|
|
|
|
<!-- https://mvnrepository.com/artifact/edu.emory.mathcs/JTransforms -->
|
|
<dependency>
|
|
<groupId>edu.emory.mathcs</groupId>
|
|
<artifactId>JTransforms</artifactId>
|
|
<version>2.4</version>
|
|
</dependency>
|
|
|
|
<!-- https://mvnrepository.com/artifact/com.sun.mail/javax.mail -->
|
|
<dependency>
|
|
<groupId>com.sun.mail</groupId>
|
|
<artifactId>javax.mail</artifactId>
|
|
<version>1.6.2</version>
|
|
</dependency>
|
|
|
|
|
|
<!-- https://mvnrepository.com/artifact/com.drewnoakes/metadata-extractor -->
|
|
<dependency>
|
|
<groupId>com.drewnoakes</groupId>
|
|
<artifactId>metadata-extractor</artifactId>
|
|
<version>2.12.0</version>
|
|
</dependency>
|
|
|
|
<!-- https://mvnrepository.com/artifact/mysql/mysql-connector-java -->
|
|
<dependency>
|
|
<groupId>mysql</groupId>
|
|
<artifactId>mysql-connector-java</artifactId>
|
|
<version>8.0.18</version>
|
|
</dependency>
|
|
|
|
<!-- https://mvnrepository.com/artifact/com.google.protobuf/protobuf-java -->
|
|
<!-- this is needed so that tensorflow models run properly (used in Deep Learning plugin) -->
|
|
<!-- NOTE it is important this is included before edu.ucar.netcdfAll so
|
|
that this version is used instead of the internal version - exclusions do
|
|
not seem to work otherwise -->
|
|
<dependency>
|
|
<groupId>com.google.protobuf</groupId>
|
|
<artifactId>protobuf-java</artifactId>
|
|
<version>3.17.0</version>
|
|
</dependency>
|
|
|
|
<!-- https://docs.unidata.ucar.edu/netcdf-java/5.2/userguide/using_netcdf_java_artifacts.html -->
|
|
<!-- exclusions have been added here to fix problem with Deep Learning plugin - see above -->
|
|
<dependency>
|
|
<groupId>edu.ucar</groupId>
|
|
<artifactId>netcdfAll</artifactId>
|
|
<version>4.6.14</version>
|
|
<exclusions>
|
|
<exclusion>
|
|
<groupId>com.google.protobuf</groupId>
|
|
<artifactId>protobuf-java</artifactId>
|
|
</exclusion>
|
|
<exclusion>
|
|
<groupId>com.google.protobuf</groupId>
|
|
<artifactId>protobuf-java-util</artifactId>
|
|
</exclusion>
|
|
</exclusions>
|
|
<scope>compile</scope>
|
|
</dependency>
|
|
|
|
<!-- https://mvnrepository.com/artifact/com.opencsv/opencsv -->
|
|
<dependency>
|
|
<groupId>com.opencsv</groupId>
|
|
<artifactId>opencsv</artifactId>
|
|
<version>5.0</version>
|
|
</dependency>
|
|
|
|
<!-- https://mvnrepository.com/artifact/org.springframework/org.springframework.core -->
|
|
|
|
<!-- https://mvnrepository.com/artifact/org.postgresql/postgresql -->
|
|
<dependency>
|
|
<groupId>org.postgresql</groupId>
|
|
<artifactId>postgresql</artifactId>
|
|
<version>42.2.24</version>
|
|
</dependency>
|
|
|
|
<!-- https://mvnrepository.com/artifact/org.renjin/renjin-script-engine
|
|
Used to export data to R structures-->
|
|
<dependency>
|
|
<groupId>org.renjin</groupId>
|
|
<artifactId>renjin-script-engine</artifactId>
|
|
<version>0.9.2725</version>
|
|
</dependency>
|
|
|
|
<!-- https://mvnrepository.com/artifact/org.slf4j/slf4j-api
|
|
this one is only needed to get rid of an annoying warning that shows up during startup -->
|
|
<dependency>
|
|
<groupId>org.slf4j</groupId>
|
|
<artifactId>slf4j-api</artifactId>
|
|
<version>1.8.0-beta4</version>
|
|
</dependency>
|
|
|
|
|
|
<!-- https://mvnrepository.com/artifact/org.slf4j/slf4j-nop
|
|
this one is only needed to get rid of an annoying warning that shows up during startup -->
|
|
<dependency>
|
|
<groupId>org.slf4j</groupId>
|
|
<artifactId>slf4j-nop</artifactId>
|
|
<version>1.8.0-beta4</version>
|
|
</dependency>
|
|
|
|
|
|
|
|
<!-- https://mvnrepository.com/artifact/org.docx4j/docx4j-JAXB-ReferenceImpl -->
|
|
<!-- note that we are excluding slf4j-api here, because if we don't then one of the
|
|
transitive dependencies of docx4j (jcl-over-slf4j) will try to load an older
|
|
version of slf4j-api, resulting in a weird warning/error that shows up every time that
|
|
PAMGuard start up -->
|
|
<!-- DONT BOTHER WITH EXCLUSION, DOESN'T MAKE THE ERROR GO AWAY. Leaving code here
|
|
just in case the older version does cause a conflict at some point -->
|
|
<dependency>
|
|
<groupId>org.docx4j</groupId>
|
|
<artifactId>docx4j-JAXB-ReferenceImpl</artifactId>
|
|
<version>11.1.3</version>
|
|
<!--
|
|
<exclusions>
|
|
<exclusion>
|
|
<groupId>org.slf4j</groupId>
|
|
<artifactId>slf4j-api</artifactId>
|
|
</exclusion>
|
|
</exclusions>
|
|
-->
|
|
</dependency>
|
|
|
|
<!-- https://mvnrepository.com/artifact/org.xerial/sqlite-jdbc -->
|
|
<dependency>
|
|
<groupId>org.xerial</groupId>
|
|
<artifactId>sqlite-jdbc</artifactId>
|
|
<version>3.45.3.0</version>
|
|
</dependency>
|
|
|
|
<!-- https://mvnrepository.com/artifact/net.sf.ucanaccess/ucanaccess -->
|
|
<dependency>
|
|
<groupId>net.sf.ucanaccess</groupId>
|
|
<artifactId>ucanaccess</artifactId>
|
|
<version>4.0.4</version>
|
|
</dependency>
|
|
|
|
<!-- https://mvnrepository.com/artifact/nz.ac.waikato.cms.weka/weka-dev -->
|
|
<dependency>
|
|
<groupId>nz.ac.waikato.cms.weka</groupId>
|
|
<artifactId>weka-dev</artifactId>
|
|
<version>3.7.7</version>
|
|
</dependency>
|
|
|
|
<!-- https://mvnrepository.com/artifact/javax.vecmath/vecmath -->
|
|
<dependency>
|
|
<groupId>javax.vecmath</groupId>
|
|
<artifactId>vecmath</artifactId>
|
|
<version>1.5.2</version>
|
|
</dependency>
|
|
|
|
<!-- Jave2 (https://github.com/a-schild/jave2) - fork of original jave from sauronsoft. A LOT bigger; the win64 files alone are > 60Mb compared
|
|
to 14Mb originally. Since the old one worked fine, let's stick with it for now and save the space
|
|
<dependency>
|
|
<groupId>ws.schild</groupId>
|
|
<artifactId>jave-core</artifactId>
|
|
<version>2.7.1</version>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>ws.schild</groupId>
|
|
<artifactId>jave-nativebin-win64</artifactId>
|
|
<version>2.7.1</version>
|
|
</dependency>
|
|
-->
|
|
|
|
<!-- https://mvnrepository.com/artifact/it.sauronsoftware/jave
|
|
DOESN'T WORK - NOT IN THE ICM REPOSITORY ANYMORE. STICK WITH ORIG JAR FILE
|
|
<dependency>
|
|
<groupId>it.sauronsoftware</groupId>
|
|
<artifactId>jave</artifactId>
|
|
<version>1.0.2</version>
|
|
</dependency>
|
|
-->
|
|
|
|
|
|
<!-- From NilusXMLGenerator POM at https://bitbucket.org/tethysacousticmetadata/nilusxmlgenerator/src/master/-->
|
|
<dependency>
|
|
<groupId>org.eclipse.persistence</groupId>
|
|
<artifactId>org.eclipse.persistence.moxy</artifactId>
|
|
<version>2.5.0</version>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>javax.xml.bind</groupId>
|
|
<artifactId>jaxb-api</artifactId>
|
|
<version>${jaxb.api.version}</version>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>org.glassfish.jaxb</groupId>
|
|
<artifactId>jaxb-runtime</artifactId>
|
|
<version>${jaxb.runtime.version}</version>
|
|
</dependency>
|
|
<dependency>
|
|
<groupId>org.glassfish.jaxb</groupId>
|
|
<artifactId>jaxb-xjc</artifactId>
|
|
<version>${jaxb.xjc.version}</version>
|
|
</dependency>
|
|
|
|
|
|
<!-- dependencies copied from TethysJavaClient -->
|
|
<dependency>
|
|
<groupId>com.sun.jersey.contribs</groupId>
|
|
<artifactId>jersey-multipart</artifactId>
|
|
<version>1.18.1</version>
|
|
</dependency>
|
|
|
|
|
|
<dependency>
|
|
<groupId>commons-cli</groupId>
|
|
<artifactId>commons-cli</artifactId>
|
|
<version>1.2</version>
|
|
</dependency>
|
|
|
|
|
|
<dependency>
|
|
<groupId>org.apache.poi</groupId>
|
|
<artifactId>poi</artifactId>
|
|
<version>3.10-beta1</version>
|
|
</dependency>
|
|
|
|
|
|
<dependency>
|
|
<groupId>com.sun.jersey</groupId>
|
|
<artifactId>jersey-client</artifactId>
|
|
<version>1.18.1</version>
|
|
</dependency>
|
|
|
|
|
|
<dependency>
|
|
<groupId>com.sun.jersey.contribs</groupId>
|
|
<artifactId>jersey-apache-client</artifactId>
|
|
<version>1.18.1</version>
|
|
</dependency>
|
|
|
|
|
|
<dependency>
|
|
<groupId>com.miglayout</groupId>
|
|
<artifactId>miglayout</artifactId>
|
|
<version>3.7.4</version>
|
|
</dependency>
|
|
|
|
|
|
<dependency>
|
|
<groupId>ca.juliusdavies</groupId>
|
|
<artifactId>not-yet-commons-ssl</artifactId>
|
|
<version>0.3.11</version>
|
|
</dependency>
|
|
|
|
|
|
<dependency>
|
|
<groupId>javax.ws.rs</groupId>
|
|
<artifactId>javax.ws.rs-api</artifactId>
|
|
<version>2.1.1</version>
|
|
</dependency>
|
|
|
|
|
|
<dependency>
|
|
<groupId>javax.xml.bind</groupId>
|
|
<artifactId>jaxb-api</artifactId>
|
|
<version>2.2.11</version>
|
|
</dependency>
|
|
|
|
|
|
<dependency>
|
|
<groupId>com.sun.xml.bind</groupId>
|
|
<artifactId>jaxb-impl</artifactId>
|
|
<version>2.2.11</version>
|
|
</dependency>
|
|
|
|
|
|
<dependency>
|
|
<groupId>javax.activation</groupId>
|
|
<artifactId>activation</artifactId>
|
|
<version>1.1</version>
|
|
</dependency>
|
|
|
|
|
|
<dependency>
|
|
<groupId>org.glassfish.jaxb</groupId>
|
|
<artifactId>jaxb-core</artifactId>
|
|
<version>2.2.11</version>
|
|
</dependency>
|
|
|
|
|
|
<dependency>
|
|
<groupId>org.glassfish.jersey.core</groupId>
|
|
<artifactId>jersey-common</artifactId>
|
|
<version>2.2</version>
|
|
</dependency>
|
|
|
|
|
|
<dependency>
|
|
<groupId>org.apache.commons</groupId>
|
|
<artifactId>commons-text</artifactId>
|
|
<version>1.9</version>
|
|
</dependency>
|
|
|
|
<!-- dependencies copied from TethysJavaClient END -->
|
|
|
|
|
|
<!-- Thethy library not in Maven central, so you may need to copy the javaclient and nilus folders from
|
|
e.g. C:\Users\dg50\source\repos\**your projectfolder**\repo\tethys\org
|
|
to C:\Users\dg50\.m2\repository\tethys\org -->
|
|
<dependency>
|
|
<groupId>tethys.org</groupId>
|
|
<artifactId>nilus</artifactId>
|
|
<version>3.1</version>
|
|
</dependency>
|
|
|
|
<dependency>
|
|
<groupId>tethys.org</groupId>
|
|
<artifactId>javaclient</artifactId>
|
|
<version>3.0</version>
|
|
</dependency>
|
|
|
|
<!--
|
|
X3 library for decompressing sud files. Not in Maven repository
|
|
you may need to copy files from your downloaded PAMGuard source code,
|
|
e.g. C:\Users\*yourreposfolder*\source\repos\PAMGuardPAMGuard\repo\pamguard\org\x3\2.2.2 to
|
|
C:\Users\*yourusername*\.m2\repository\pamguard\org\x3\2.2.2
|
|
-->
|
|
<dependency>
|
|
<groupId>org.pamguard</groupId>
|
|
<artifactId>x3</artifactId>
|
|
<version>2.2.7</version>
|
|
</dependency>
|
|
|
|
|
|
<!-- https://mvnrepository.com/artifact/it.sauronsoftware/jave -->
|
|
<dependency>
|
|
<groupId>it.sauronsoftware</groupId>
|
|
<artifactId>jave</artifactId>
|
|
<version>1.0.2</version>
|
|
</dependency>
|
|
|
|
<!-- not in Maven repository -->
|
|
<dependency>
|
|
<groupId>com.synthbot</groupId>
|
|
<artifactId>jasiohost</artifactId>
|
|
<version>1.0.0</version>
|
|
</dependency>
|
|
|
|
<!-- https://mvnrepository.com/artifact/com.fasterxml.jackson.dataformat/jackson-dataformat-xml -->
|
|
<!--
|
|
<dependency>
|
|
<groupId>com.fasterxml.jackson.dataformat</groupId>
|
|
<artifactId>jackson-dataformat-xml</artifactId>
|
|
<version>2.10.1</version>
|
|
</dependency>
|
|
-->
|
|
|
|
<!-- https://mvnrepository.com/artifact/org.springframework/spring-core -->
|
|
<dependency>
|
|
<groupId>org.springframework</groupId>
|
|
<artifactId>spring-core</artifactId>
|
|
<version>5.2.3.RELEASE</version>
|
|
</dependency>
|
|
|
|
<!-- https://mvnrepository.com/artifact/com.1stleg/jnativehook -->
|
|
<!-- For global hotkeys, especially in Logger -->
|
|
<dependency>
|
|
<groupId>com.1stleg</groupId>
|
|
<artifactId>jnativehook</artifactId>
|
|
<version>2.1.0</version>
|
|
</dependency>
|
|
|
|
<!-- https://mvnrepository.com/artifact/org.swinglabs.swingx/swingx-all -->
|
|
<!-- For new Network Receive Module -->
|
|
<dependency>
|
|
<groupId>org.swinglabs.swingx</groupId>
|
|
<artifactId>swingx-all</artifactId>
|
|
<version>1.6.5-1</version>
|
|
</dependency>
|
|
|
|
|
|
<!-- Extra 3D bits for JavaFX -->
|
|
<dependency>
|
|
<groupId>org.fxyz3d</groupId>
|
|
<artifactId>fxyz3d</artifactId>
|
|
<version>0.6.0</version>
|
|
</dependency>
|
|
|
|
<!-- Atlanta style for JavaFX -->
|
|
<dependency>
|
|
<groupId>io.github.mkpaz</groupId>
|
|
<artifactId>atlantafx-base</artifactId>
|
|
<version>2.0.1</version>
|
|
</dependency>
|
|
|
|
</dependencies>
|
|
</project> |