Commit Graph

16 Commits

Author SHA1 Message Date
Jamie Mac
d85d9078a1
Bug fixes (#31)
* Updates to click train detector

New GUI for click train classification - more intuitive and allows users to build more powerful classifiers.
CPOD data can now build average waveforms.
CPOD click trains can be viewed in TDisplayFX pop up menu displays
Fixed Peak Frequency symbol chooser so it saves the colour box settings

* Screenshots

* Updates and bug fixes to click train detector and CPOD importer

* Updates to click train detector

New GUI for click train classification - more intuitive and allows users to build more powerful classifiers.
CPOD data can now build average waveforms.
CPOD click trains can be viewed in TDisplayFX pop up menu displays
Fixed Peak Frequency symbol chooser so it saves the colour box settings

* Updates and bug fixes to click train detector and CPOD importer

* Fix standard classifier JSON logging

* Merge fixes to click train detector

* Updates to click train detector

New GUI for click train classification - more intuitive and allows users to build more powerful classifiers.
CPOD data can now build average waveforms.
CPOD click trains can be viewed in TDisplayFX pop up menu displays
Fixed Peak Frequency symbol chooser so it saves the colour box settings

* Screenshots

* Updates and bug fixes to click train detector and CPOD importer

* Updates to click train detector

New GUI for click train classification - more intuitive and allows users to build more powerful classifiers.
CPOD data can now build average waveforms.
CPOD click trains can be viewed in TDisplayFX pop up menu displays
Fixed Peak Frequency symbol chooser so it saves the colour box settings

* Screenshots

* Updates and bug fixes to click train detector and CPOD importer

* Fix standard classifier JSON logging

* Google humpback whale deep learning classifier

Google's humpback whale deep learning classifier can now be imported.
Updated TDisplayFX to make the data selection panes cleaner and clearer.
Updated the TDisplayFX so that predicitons from deep learning models now have some display options e.g. changing colour.

* Bug fix to UI

* Updates to FX GUI

* Bug fixes

Click train detector now registers click train if there are no longer any click detections for a significant period of time.

Jitter in wrap spectrogram for TDisplayFX fixed

Deep learning module compatible with bearing localiser

Updates to FX GUI
2022-04-28 10:52:03 +01:00
Douglas Gillespie
c4ee5f389b
Contact Collator Updated (#30)
* Change synchronization on RawDataTransforms soit uses the owner data
holder, not itself for synchronization. Otherwise you get thread locks.

* fix problem in SummaryComand

* Update command line options

* Change synchronization on RawDataTransforms soit uses the owner data
holder, not itself for synchronization. Otherwise you get thread locks.

* Update command line options

* Update DecimatorParams.java

* couple of updates to support new contact collator plugin

* Sorting out sample rate info in clip display to support Contact Collator
plugin

* FLAC Speed

Improve flac speed

* Update .gitignore

* Update .gitignore

* Updates to support new features in Contact Collator
2022-04-27 09:34:27 +01:00
Jamie Mac
da387005a3
Click train, CPOD, Time Base Display, Ishmael updates and Google deep learning integration (#28)
* Updates to click train detector

New GUI for click train classification - more intuitive and allows users to build more powerful classifiers.
CPOD data can now build average waveforms.
CPOD click trains can be viewed in TDisplayFX pop up menu displays
Fixed Peak Frequency symbol chooser so it saves the colour box settings

* Create click_train_help.md

* Update click_train_help.md

* Screenshots

* Update click_train_help.md

* Update click_train_help.md

* Update click_train_help.md

* More screenshots

* Add screenshots

* Update click_train_help.md

* Add classifier screenshot

* Update click_train_help.md

* Update click_train_help.md

* Update click_train_help.md

* Updates and bug fixes to click train detector and CPOD importer

* Update click_train_help.md

* Update POM with latest jdl4pam

* Add screenshots for click train detector help

* Screenshots

* Update click_train_help.md

* Defult option for CPOD and porpoise to click train detector.

Also a minor

* Update pom.xml

* Bug fix for raw spectrogram in TDDisplayFX

* Update KetosClassifier.java

* Updates to click train detector

New GUI for click train classification - more intuitive and allows users to build more powerful classifiers.
CPOD data can now build average waveforms.
CPOD click trains can be viewed in TDisplayFX pop up menu displays
Fixed Peak Frequency symbol chooser so it saves the colour box settings

* Create click_train_help.md

* Update click_train_help.md

* Screenshots

* Update click_train_help.md

* More screenshots

* Update click_train_help.md

* Update click_train_help.md

* Add screenshots

* Add classifier screenshot

* Update click_train_help.md

* Updates and bug fixes to click train detector and CPOD importer

* Update click_train_help.md

* Update click_train_help.md

* Update click_train_help.md

* Update click_train_help.md

* Add screenshots for click train detector help

* Screenshots

* Update click_train_help.md

* Defult option for CPOD and porpoise to click train detector.

Also a minor

* Bug fix for raw spectrogram in TDDisplayFX

* Update KetosClassifier.java

* Fix standard classifier JSON logging

* Update click_train_help.md

* Fixed bug in sweep classifier when using SoundTrap click detections

* Added some colour averaging in the TFDisplayFX spectrgoram

* Bug fix for rainbow click bearings

Bug fix when rainbow clicks are imported mean bearings cannot be calculated - was an array size issue in DelayGroup

* Google humpback whale deep learning classifier

Google's humpback whale deep learning classifier can now be imported.
Updated TDisplayFX to make the data selection panes cleaner and clearer.
Updated the TDisplayFX so that predicitons from deep learning models now have some display options e.g. changing colour.

* Updated the prediction plots on time display

Deep learning prediciton plots on the time display have now been updated to have some colour options and also act as a legend.

* Updates to TDisplayFX

yFIshmael now owrks with TDisplayFX
TDisplayFX UI changes to make simpler.
Some abstraction for drawing lines on TDisplayFX

* Updates to click train detector

New GUI for click train classification - more intuitive and allows users to build more powerful classifiers.
CPOD data can now build average waveforms.
CPOD click trains can be viewed in TDisplayFX pop up menu displays
Fixed Peak Frequency symbol chooser so it saves the colour box settings

* Create click_train_help.md

* Update click_train_help.md

* Screenshots

* Update click_train_help.md

* More screenshots

* Update click_train_help.md

* Update click_train_help.md

* Add screenshots

* Add classifier screenshot

* Update click_train_help.md

* Updates and bug fixes to click train detector and CPOD importer

* Update click_train_help.md

* Update click_train_help.md

* Update click_train_help.md

* Update click_train_help.md

* Add screenshots for click train detector help

* Screenshots

* Update click_train_help.md

* Defult option for CPOD and porpoise to click train detector.

Also a minor

* Updates to click train detector

New GUI for click train classification - more intuitive and allows users to build more powerful classifiers.
CPOD data can now build average waveforms.
CPOD click trains can be viewed in TDisplayFX pop up menu displays
Fixed Peak Frequency symbol chooser so it saves the colour box settings

* Create click_train_help.md

* Update click_train_help.md

* Update click_train_help.md

* Updates and bug fixes to click train detector and CPOD importer

* Bug fix for raw spectrogram in TDDisplayFX

* Update KetosClassifier.java

* Fix standard classifier JSON logging

* Fixed bug in sweep classifier when using SoundTrap click detections

* Added some colour averaging in the TFDisplayFX spectrgoram

* Bug fix for rainbow click bearings

Bug fix when rainbow clicks are imported mean bearings cannot be calculated - was an array size issue in DelayGroup

* Google humpback whale deep learning classifier

Google's humpback whale deep learning classifier can now be imported.
Updated TDisplayFX to make the data selection panes cleaner and clearer.
Updated the TDisplayFX so that predicitons from deep learning models now have some display options e.g. changing colour.

* Updated the prediction plots on time display

Deep learning prediciton plots on the time display have now been updated to have some colour options and also act as a legend.

* Updates to TDisplayFX

yFIshmael now owrks with TDisplayFX
TDisplayFX UI changes to make simpler.
Some abstraction for drawing lines on TDisplayFX

* Merge fixes to click train detector

* Bug fix to UI
2022-04-20 12:27:21 +01:00
Douglas Gillespie
f365695b4f Feature fix for reading flac files offline, where it was getting a bit
confused about load start times and attempting to reload for too much
data, causing out of memory errors.
2022-03-22 11:46:30 +00:00
douggillespie
3d26fce9d1 Messing with POM to get Jamies dl code working. His Maven repo is
currently not working, so I've included his jar and also had to include
ai.djl in the POM for some classes he uses, but aren't in his jar.
Should be working now.
2022-01-15 17:53:27 +00:00
Jamie Mac
7cb657bac6 Update .gitignore 2022-01-14 10:33:47 +00:00
Jamie Mac
d57102329f Merge remote-tracking branch 'upstream/main' 2022-01-14 08:16:18 +00:00
Jamie Mac
1cbbf97187 Update .gitignore 2022-01-14 08:16:10 +00:00
douggillespie
28f80c4917 update gitignore to include Eclipse project file 2022-01-13 15:10:57 +00:00
Jamie Mac
f419531b24 Add some files to git ignore 2022-01-10 10:57:39 +00:00
Jamie Mac
d822734b51 Add to git ignore 2022-01-10 10:41:04 +00:00
douggillespie
f03f66782a Revert "Added fullstop"
This reverts commit 255c663af1.
2022-01-10 10:24:21 +00:00
douggillespie
e70ae9616c Revert "Delete .gitignore"
This reverts commit c537dacbd9.
2022-01-10 10:20:58 +00:00
Douglas Gillespie
c537dacbd9
Delete .gitignore 2022-01-10 10:12:23 +00:00
Jamie Mac
255c663af1 Added fullstop 2022-01-10 09:58:26 +00:00
douggillespie
ab1c228730 Initial commit 2022-01-07 10:27:52 +00:00