Commit Graph

15 Commits

Author SHA1 Message Date
Douglas Gillespie
c4ee5f389b
Contact Collator Updated (#30)
* Change synchronization on RawDataTransforms soit uses the owner data
holder, not itself for synchronization. Otherwise you get thread locks.

* fix problem in SummaryComand

* Update command line options

* Change synchronization on RawDataTransforms soit uses the owner data
holder, not itself for synchronization. Otherwise you get thread locks.

* Update command line options

* Update DecimatorParams.java

* couple of updates to support new contact collator plugin

* Sorting out sample rate info in clip display to support Contact Collator
plugin

* FLAC Speed

Improve flac speed

* Update .gitignore

* Update .gitignore

* Updates to support new features in Contact Collator
2022-04-27 09:34:27 +01:00
Jamie Mac
da387005a3
Click train, CPOD, Time Base Display, Ishmael updates and Google deep learning integration (#28)
* Updates to click train detector

New GUI for click train classification - more intuitive and allows users to build more powerful classifiers.
CPOD data can now build average waveforms.
CPOD click trains can be viewed in TDisplayFX pop up menu displays
Fixed Peak Frequency symbol chooser so it saves the colour box settings

* Create click_train_help.md

* Update click_train_help.md

* Screenshots

* Update click_train_help.md

* Update click_train_help.md

* Update click_train_help.md

* More screenshots

* Add screenshots

* Update click_train_help.md

* Add classifier screenshot

* Update click_train_help.md

* Update click_train_help.md

* Update click_train_help.md

* Updates and bug fixes to click train detector and CPOD importer

* Update click_train_help.md

* Update POM with latest jdl4pam

* Add screenshots for click train detector help

* Screenshots

* Update click_train_help.md

* Defult option for CPOD and porpoise to click train detector.

Also a minor

* Update pom.xml

* Bug fix for raw spectrogram in TDDisplayFX

* Update KetosClassifier.java

* Updates to click train detector

New GUI for click train classification - more intuitive and allows users to build more powerful classifiers.
CPOD data can now build average waveforms.
CPOD click trains can be viewed in TDisplayFX pop up menu displays
Fixed Peak Frequency symbol chooser so it saves the colour box settings

* Create click_train_help.md

* Update click_train_help.md

* Screenshots

* Update click_train_help.md

* More screenshots

* Update click_train_help.md

* Update click_train_help.md

* Add screenshots

* Add classifier screenshot

* Update click_train_help.md

* Updates and bug fixes to click train detector and CPOD importer

* Update click_train_help.md

* Update click_train_help.md

* Update click_train_help.md

* Update click_train_help.md

* Add screenshots for click train detector help

* Screenshots

* Update click_train_help.md

* Defult option for CPOD and porpoise to click train detector.

Also a minor

* Bug fix for raw spectrogram in TDDisplayFX

* Update KetosClassifier.java

* Fix standard classifier JSON logging

* Update click_train_help.md

* Fixed bug in sweep classifier when using SoundTrap click detections

* Added some colour averaging in the TFDisplayFX spectrgoram

* Bug fix for rainbow click bearings

Bug fix when rainbow clicks are imported mean bearings cannot be calculated - was an array size issue in DelayGroup

* Google humpback whale deep learning classifier

Google's humpback whale deep learning classifier can now be imported.
Updated TDisplayFX to make the data selection panes cleaner and clearer.
Updated the TDisplayFX so that predicitons from deep learning models now have some display options e.g. changing colour.

* Updated the prediction plots on time display

Deep learning prediciton plots on the time display have now been updated to have some colour options and also act as a legend.

* Updates to TDisplayFX

yFIshmael now owrks with TDisplayFX
TDisplayFX UI changes to make simpler.
Some abstraction for drawing lines on TDisplayFX

* Updates to click train detector

New GUI for click train classification - more intuitive and allows users to build more powerful classifiers.
CPOD data can now build average waveforms.
CPOD click trains can be viewed in TDisplayFX pop up menu displays
Fixed Peak Frequency symbol chooser so it saves the colour box settings

* Create click_train_help.md

* Update click_train_help.md

* Screenshots

* Update click_train_help.md

* More screenshots

* Update click_train_help.md

* Update click_train_help.md

* Add screenshots

* Add classifier screenshot

* Update click_train_help.md

* Updates and bug fixes to click train detector and CPOD importer

* Update click_train_help.md

* Update click_train_help.md

* Update click_train_help.md

* Update click_train_help.md

* Add screenshots for click train detector help

* Screenshots

* Update click_train_help.md

* Defult option for CPOD and porpoise to click train detector.

Also a minor

* Updates to click train detector

New GUI for click train classification - more intuitive and allows users to build more powerful classifiers.
CPOD data can now build average waveforms.
CPOD click trains can be viewed in TDisplayFX pop up menu displays
Fixed Peak Frequency symbol chooser so it saves the colour box settings

* Create click_train_help.md

* Update click_train_help.md

* Update click_train_help.md

* Updates and bug fixes to click train detector and CPOD importer

* Bug fix for raw spectrogram in TDDisplayFX

* Update KetosClassifier.java

* Fix standard classifier JSON logging

* Fixed bug in sweep classifier when using SoundTrap click detections

* Added some colour averaging in the TFDisplayFX spectrgoram

* Bug fix for rainbow click bearings

Bug fix when rainbow clicks are imported mean bearings cannot be calculated - was an array size issue in DelayGroup

* Google humpback whale deep learning classifier

Google's humpback whale deep learning classifier can now be imported.
Updated TDisplayFX to make the data selection panes cleaner and clearer.
Updated the TDisplayFX so that predicitons from deep learning models now have some display options e.g. changing colour.

* Updated the prediction plots on time display

Deep learning prediciton plots on the time display have now been updated to have some colour options and also act as a legend.

* Updates to TDisplayFX

yFIshmael now owrks with TDisplayFX
TDisplayFX UI changes to make simpler.
Some abstraction for drawing lines on TDisplayFX

* Merge fixes to click train detector

* Bug fix to UI
2022-04-20 12:27:21 +01:00
Douglas Gillespie
07752f3dd3 push correct jdk in classpath 2022-03-29 14:47:38 +01:00
Douglas Gillespie
f365695b4f Feature fix for reading flac files offline, where it was getting a bit
confused about load start times and attempting to reload for too much
data, causing out of memory errors.
2022-03-22 11:46:30 +00:00
Douglas Gillespie
e0c9abcc3d
Rw improvement (#16)
* Update .project

* RWE imporvement to peak detection and dealing with smoothing.

* Make improvements to MARW edge detector so that it doesn't merge
harmonics, by using a threshold down from the peak as well as up from
the noise
2022-02-18 17:05:51 +00:00
Douglas Gillespie
78d136d1f0 Add some jar files which are not in Maven so can now build on a virgin
machine.
2022-02-02 14:11:09 +00:00
Douglas Gillespie
4ddf206b9b
Added storage of thresholds, stats level and peak state to binary output (#1)
of GPL detector so that these can be displayed in viewer.
2022-01-19 16:12:07 +00:00
douggillespie
f4ada3fa94 POM now working for Jamies dl library. 2022-01-18 15:28:46 +00:00
douggillespie
3d26fce9d1 Messing with POM to get Jamies dl code working. His Maven repo is
currently not working, so I've included his jar and also had to include
ai.djl in the POM for some classes he uses, but aren't in his jar.
Should be working now.
2022-01-15 17:53:27 +00:00
Jamie Mac
f419531b24 Add some files to git ignore 2022-01-10 10:57:39 +00:00
douggillespie
f03f66782a Revert "Added fullstop"
This reverts commit 255c663af1.
2022-01-10 10:24:21 +00:00
douggillespie
aa7e9e452b Revert "Delete .classpath"
This reverts commit 582ea3cbe2.
2022-01-10 10:21:12 +00:00
Douglas Gillespie
582ea3cbe2
Delete .classpath 2022-01-10 10:11:30 +00:00
Jamie Mac
255c663af1 Added fullstop 2022-01-10 09:58:26 +00:00
douggillespie
7d095c29b4 Commit PAMGuard code from SVN r6251 to GIT 2022-01-07 10:41:38 +00:00