* allow Rocca to run without classifiers
Fixed bug that threw an error if no classifier files were specified in Rocca Params dialog
* add rocca switch to enable dev mode
currently only shows/hides extra buttons in the Params dialog, but will
extend to more options in the future
* Updates to click train detector
New GUI for click train classification - more intuitive and allows users to build more powerful classifiers.
CPOD data can now build average waveforms.
CPOD click trains can be viewed in TDisplayFX pop up menu displays
Fixed Peak Frequency symbol chooser so it saves the colour box settings
* Create click_train_help.md
* Update click_train_help.md
* Screenshots
* Update click_train_help.md
* Update click_train_help.md
* Update click_train_help.md
* More screenshots
* Add screenshots
* Update click_train_help.md
* Add classifier screenshot
* Update click_train_help.md
* Update click_train_help.md
* Update click_train_help.md
* Updates and bug fixes to click train detector and CPOD importer
* Update click_train_help.md
* Update POM with latest jdl4pam
* Add screenshots for click train detector help
* Screenshots
* Update click_train_help.md
* Defult option for CPOD and porpoise to click train detector.
Also a minor
* Update pom.xml
* Bug fix for raw spectrogram in TDDisplayFX
* Update KetosClassifier.java
* Updates to click train detector
New GUI for click train classification - more intuitive and allows users to build more powerful classifiers.
CPOD data can now build average waveforms.
CPOD click trains can be viewed in TDisplayFX pop up menu displays
Fixed Peak Frequency symbol chooser so it saves the colour box settings
* Create click_train_help.md
* Update click_train_help.md
* Screenshots
* Update click_train_help.md
* More screenshots
* Update click_train_help.md
* Update click_train_help.md
* Add screenshots
* Add classifier screenshot
* Update click_train_help.md
* Updates and bug fixes to click train detector and CPOD importer
* Update click_train_help.md
* Update click_train_help.md
* Update click_train_help.md
* Update click_train_help.md
* Add screenshots for click train detector help
* Screenshots
* Update click_train_help.md
* Defult option for CPOD and porpoise to click train detector.
Also a minor
* Bug fix for raw spectrogram in TDDisplayFX
* Update KetosClassifier.java
* Fix standard classifier JSON logging
* Update click_train_help.md
* Fixed bug in sweep classifier when using SoundTrap click detections
* Added some colour averaging in the TFDisplayFX spectrgoram
* Bug fix for rainbow click bearings
Bug fix when rainbow clicks are imported mean bearings cannot be calculated - was an array size issue in DelayGroup
* Google humpback whale deep learning classifier
Google's humpback whale deep learning classifier can now be imported.
Updated TDisplayFX to make the data selection panes cleaner and clearer.
Updated the TDisplayFX so that predicitons from deep learning models now have some display options e.g. changing colour.
* Updated the prediction plots on time display
Deep learning prediciton plots on the time display have now been updated to have some colour options and also act as a legend.
* Updates to TDisplayFX
yFIshmael now owrks with TDisplayFX
TDisplayFX UI changes to make simpler.
Some abstraction for drawing lines on TDisplayFX
* Updates to click train detector
New GUI for click train classification - more intuitive and allows users to build more powerful classifiers.
CPOD data can now build average waveforms.
CPOD click trains can be viewed in TDisplayFX pop up menu displays
Fixed Peak Frequency symbol chooser so it saves the colour box settings
* Create click_train_help.md
* Update click_train_help.md
* Screenshots
* Update click_train_help.md
* More screenshots
* Update click_train_help.md
* Update click_train_help.md
* Add screenshots
* Add classifier screenshot
* Update click_train_help.md
* Updates and bug fixes to click train detector and CPOD importer
* Update click_train_help.md
* Update click_train_help.md
* Update click_train_help.md
* Update click_train_help.md
* Add screenshots for click train detector help
* Screenshots
* Update click_train_help.md
* Defult option for CPOD and porpoise to click train detector.
Also a minor
* Updates to click train detector
New GUI for click train classification - more intuitive and allows users to build more powerful classifiers.
CPOD data can now build average waveforms.
CPOD click trains can be viewed in TDisplayFX pop up menu displays
Fixed Peak Frequency symbol chooser so it saves the colour box settings
* Create click_train_help.md
* Update click_train_help.md
* Update click_train_help.md
* Updates and bug fixes to click train detector and CPOD importer
* Bug fix for raw spectrogram in TDDisplayFX
* Update KetosClassifier.java
* Fix standard classifier JSON logging
* Fixed bug in sweep classifier when using SoundTrap click detections
* Added some colour averaging in the TFDisplayFX spectrgoram
* Bug fix for rainbow click bearings
Bug fix when rainbow clicks are imported mean bearings cannot be calculated - was an array size issue in DelayGroup
* Google humpback whale deep learning classifier
Google's humpback whale deep learning classifier can now be imported.
Updated TDisplayFX to make the data selection panes cleaner and clearer.
Updated the TDisplayFX so that predicitons from deep learning models now have some display options e.g. changing colour.
* Updated the prediction plots on time display
Deep learning prediciton plots on the time display have now been updated to have some colour options and also act as a legend.
* Updates to TDisplayFX
yFIshmael now owrks with TDisplayFX
TDisplayFX UI changes to make simpler.
Some abstraction for drawing lines on TDisplayFX
* Merge fixes to click train detector
* Bug fix to UI
* Updates to FX GUI
* Updates to click train detector
New GUI for click train classification - more intuitive and allows users to build more powerful classifiers.
CPOD data can now build average waveforms.
CPOD click trains can be viewed in TDisplayFX pop up menu displays
Fixed Peak Frequency symbol chooser so it saves the colour box settings
* Screenshots
* Updates and bug fixes to click train detector and CPOD importer
* Updates to click train detector
New GUI for click train classification - more intuitive and allows users to build more powerful classifiers.
CPOD data can now build average waveforms.
CPOD click trains can be viewed in TDisplayFX pop up menu displays
Fixed Peak Frequency symbol chooser so it saves the colour box settings
* Updates and bug fixes to click train detector and CPOD importer
* Fix standard classifier JSON logging
* Merge fixes to click train detector
* Updates to click train detector
New GUI for click train classification - more intuitive and allows users to build more powerful classifiers.
CPOD data can now build average waveforms.
CPOD click trains can be viewed in TDisplayFX pop up menu displays
Fixed Peak Frequency symbol chooser so it saves the colour box settings
* Screenshots
* Updates and bug fixes to click train detector and CPOD importer
* Updates to click train detector
New GUI for click train classification - more intuitive and allows users to build more powerful classifiers.
CPOD data can now build average waveforms.
CPOD click trains can be viewed in TDisplayFX pop up menu displays
Fixed Peak Frequency symbol chooser so it saves the colour box settings
* Screenshots
* Updates and bug fixes to click train detector and CPOD importer
* Fix standard classifier JSON logging
* Google humpback whale deep learning classifier
Google's humpback whale deep learning classifier can now be imported.
Updated TDisplayFX to make the data selection panes cleaner and clearer.
Updated the TDisplayFX so that predicitons from deep learning models now have some display options e.g. changing colour.
* Bug fix to UI
* Bug fixes to FX GUI
* Updates to click train detector
* Squashed commit of the following:
commit 9f998165ee
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date: Mon May 2 19:40:24 2022 +0100
Updates to support ContactCollator plugin (#33)
* Change synchronization on RawDataTransforms soit uses the owner data
holder, not itself for synchronization. Otherwise you get thread locks.
* fix problem in SummaryComand
* Update command line options
* Change synchronization on RawDataTransforms soit uses the owner data
holder, not itself for synchronization. Otherwise you get thread locks.
* Update command line options
* Update DecimatorParams.java
* couple of updates to support new contact collator plugin
* Sorting out sample rate info in clip display to support Contact Collator
plugin
* FLAC Speed
Improve flac speed
* Update .gitignore
* Update .gitignore
* Updates to support new features in Contact Collator
* Small update to RawDatautils to handle null data
* Updates to click train detector
* Squashed commit of the following:
commit 62b020b320
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date: Sat May 14 06:52:20 2022 +0100
Add a new offlinefileslist function
commit 3a9a5311aa
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date: Wed Apr 27 09:43:31 2022 +0100
Update .gitignore
commit 9f998165ee
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date: Mon May 2 19:40:24 2022 +0100
Updates to support ContactCollator plugin (#33)
* Change synchronization on RawDataTransforms soit uses the owner data
holder, not itself for synchronization. Otherwise you get thread locks.
* fix problem in SummaryComand
* Update command line options
* Change synchronization on RawDataTransforms soit uses the owner data
holder, not itself for synchronization. Otherwise you get thread locks.
* Update command line options
* Update DecimatorParams.java
* couple of updates to support new contact collator plugin
* Sorting out sample rate info in clip display to support Contact Collator
plugin
* FLAC Speed
Improve flac speed
* Update .gitignore
* Update .gitignore
* Updates to support new features in Contact Collator
* Small update to RawDatautils to handle null data
* Updated data selector for click train detector
* Click train detector updates and bug fixes
Fixed very annoying bug which meant templates did not show properly when the dialog was first opened in swing.
Added feature to simple classifier were % of clicks of one click classification (or other data selector paramter) can be used to classify.
Co-authored-by: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
* Change synchronization on RawDataTransforms soit uses the owner data
holder, not itself for synchronization. Otherwise you get thread locks.
* fix problem in SummaryComand
* Update command line options
* Change synchronization on RawDataTransforms soit uses the owner data
holder, not itself for synchronization. Otherwise you get thread locks.
* Update command line options
* Update DecimatorParams.java
* couple of updates to support new contact collator plugin
* Sorting out sample rate info in clip display to support Contact Collator
plugin
* FLAC Speed
Improve flac speed
* Update .gitignore
* Update .gitignore
* Updates to support new features in Contact Collator
* Small update to RawDatautils to handle null data
* Updates to click train detector
New GUI for click train classification - more intuitive and allows users to build more powerful classifiers.
CPOD data can now build average waveforms.
CPOD click trains can be viewed in TDisplayFX pop up menu displays
Fixed Peak Frequency symbol chooser so it saves the colour box settings
* Screenshots
* Updates and bug fixes to click train detector and CPOD importer
* Updates to click train detector
New GUI for click train classification - more intuitive and allows users to build more powerful classifiers.
CPOD data can now build average waveforms.
CPOD click trains can be viewed in TDisplayFX pop up menu displays
Fixed Peak Frequency symbol chooser so it saves the colour box settings
* Updates and bug fixes to click train detector and CPOD importer
* Fix standard classifier JSON logging
* Merge fixes to click train detector
* Updates to click train detector
New GUI for click train classification - more intuitive and allows users to build more powerful classifiers.
CPOD data can now build average waveforms.
CPOD click trains can be viewed in TDisplayFX pop up menu displays
Fixed Peak Frequency symbol chooser so it saves the colour box settings
* Screenshots
* Updates and bug fixes to click train detector and CPOD importer
* Updates to click train detector
New GUI for click train classification - more intuitive and allows users to build more powerful classifiers.
CPOD data can now build average waveforms.
CPOD click trains can be viewed in TDisplayFX pop up menu displays
Fixed Peak Frequency symbol chooser so it saves the colour box settings
* Screenshots
* Updates and bug fixes to click train detector and CPOD importer
* Fix standard classifier JSON logging
* Google humpback whale deep learning classifier
Google's humpback whale deep learning classifier can now be imported.
Updated TDisplayFX to make the data selection panes cleaner and clearer.
Updated the TDisplayFX so that predicitons from deep learning models now have some display options e.g. changing colour.
* Bug fix to UI
* Updates to FX GUI
* Bug fixes
Click train detector now registers click train if there are no longer any click detections for a significant period of time.
Jitter in wrap spectrogram for TDisplayFX fixed
Deep learning module compatible with bearing localiser
Updates to FX GUI
* Change synchronization on RawDataTransforms soit uses the owner data
holder, not itself for synchronization. Otherwise you get thread locks.
* fix problem in SummaryComand
* Update command line options
* Change synchronization on RawDataTransforms soit uses the owner data
holder, not itself for synchronization. Otherwise you get thread locks.
* Update command line options
* Update DecimatorParams.java
* couple of updates to support new contact collator plugin
* Sorting out sample rate info in clip display to support Contact Collator
plugin
* FLAC Speed
Improve flac speed
* Update .gitignore
* Update .gitignore
* Updates to support new features in Contact Collator
* Updates to click train detector
New GUI for click train classification - more intuitive and allows users to build more powerful classifiers.
CPOD data can now build average waveforms.
CPOD click trains can be viewed in TDisplayFX pop up menu displays
Fixed Peak Frequency symbol chooser so it saves the colour box settings
* Create click_train_help.md
* Update click_train_help.md
* Screenshots
* Update click_train_help.md
* Update click_train_help.md
* Update click_train_help.md
* More screenshots
* Add screenshots
* Update click_train_help.md
* Add classifier screenshot
* Update click_train_help.md
* Update click_train_help.md
* Update click_train_help.md
* Updates and bug fixes to click train detector and CPOD importer
* Update click_train_help.md
* Update POM with latest jdl4pam
* Add screenshots for click train detector help
* Screenshots
* Update click_train_help.md
* Defult option for CPOD and porpoise to click train detector.
Also a minor
* Update pom.xml
* Bug fix for raw spectrogram in TDDisplayFX
* Update KetosClassifier.java
* Updates to click train detector
New GUI for click train classification - more intuitive and allows users to build more powerful classifiers.
CPOD data can now build average waveforms.
CPOD click trains can be viewed in TDisplayFX pop up menu displays
Fixed Peak Frequency symbol chooser so it saves the colour box settings
* Create click_train_help.md
* Update click_train_help.md
* Screenshots
* Update click_train_help.md
* More screenshots
* Update click_train_help.md
* Update click_train_help.md
* Add screenshots
* Add classifier screenshot
* Update click_train_help.md
* Updates and bug fixes to click train detector and CPOD importer
* Update click_train_help.md
* Update click_train_help.md
* Update click_train_help.md
* Update click_train_help.md
* Add screenshots for click train detector help
* Screenshots
* Update click_train_help.md
* Defult option for CPOD and porpoise to click train detector.
Also a minor
* Bug fix for raw spectrogram in TDDisplayFX
* Update KetosClassifier.java
* Fix standard classifier JSON logging
* Update click_train_help.md
* Fixed bug in sweep classifier when using SoundTrap click detections
* Added some colour averaging in the TFDisplayFX spectrgoram
* Bug fix for rainbow click bearings
Bug fix when rainbow clicks are imported mean bearings cannot be calculated - was an array size issue in DelayGroup
* Google humpback whale deep learning classifier
Google's humpback whale deep learning classifier can now be imported.
Updated TDisplayFX to make the data selection panes cleaner and clearer.
Updated the TDisplayFX so that predicitons from deep learning models now have some display options e.g. changing colour.
* Updated the prediction plots on time display
Deep learning prediciton plots on the time display have now been updated to have some colour options and also act as a legend.
* Updates to TDisplayFX
yFIshmael now owrks with TDisplayFX
TDisplayFX UI changes to make simpler.
Some abstraction for drawing lines on TDisplayFX
* Updates to click train detector
New GUI for click train classification - more intuitive and allows users to build more powerful classifiers.
CPOD data can now build average waveforms.
CPOD click trains can be viewed in TDisplayFX pop up menu displays
Fixed Peak Frequency symbol chooser so it saves the colour box settings
* Create click_train_help.md
* Update click_train_help.md
* Screenshots
* Update click_train_help.md
* More screenshots
* Update click_train_help.md
* Update click_train_help.md
* Add screenshots
* Add classifier screenshot
* Update click_train_help.md
* Updates and bug fixes to click train detector and CPOD importer
* Update click_train_help.md
* Update click_train_help.md
* Update click_train_help.md
* Update click_train_help.md
* Add screenshots for click train detector help
* Screenshots
* Update click_train_help.md
* Defult option for CPOD and porpoise to click train detector.
Also a minor
* Updates to click train detector
New GUI for click train classification - more intuitive and allows users to build more powerful classifiers.
CPOD data can now build average waveforms.
CPOD click trains can be viewed in TDisplayFX pop up menu displays
Fixed Peak Frequency symbol chooser so it saves the colour box settings
* Create click_train_help.md
* Update click_train_help.md
* Update click_train_help.md
* Updates and bug fixes to click train detector and CPOD importer
* Bug fix for raw spectrogram in TDDisplayFX
* Update KetosClassifier.java
* Fix standard classifier JSON logging
* Fixed bug in sweep classifier when using SoundTrap click detections
* Added some colour averaging in the TFDisplayFX spectrgoram
* Bug fix for rainbow click bearings
Bug fix when rainbow clicks are imported mean bearings cannot be calculated - was an array size issue in DelayGroup
* Google humpback whale deep learning classifier
Google's humpback whale deep learning classifier can now be imported.
Updated TDisplayFX to make the data selection panes cleaner and clearer.
Updated the TDisplayFX so that predicitons from deep learning models now have some display options e.g. changing colour.
* Updated the prediction plots on time display
Deep learning prediciton plots on the time display have now been updated to have some colour options and also act as a legend.
* Updates to TDisplayFX
yFIshmael now owrks with TDisplayFX
TDisplayFX UI changes to make simpler.
Some abstraction for drawing lines on TDisplayFX
* Merge fixes to click train detector
* Bug fix to UI
currently not working, so I've included his jar and also had to include
ai.djl in the POM for some classes he uses, but aren't in his jar.
Should be working now.
