|
|
|
|
@ -1,6 +1,5 @@
|
|
|
|
|
package tethys.deployment;
|
|
|
|
|
|
|
|
|
|
import java.io.Serializable;
|
|
|
|
|
import java.math.BigInteger;
|
|
|
|
|
import java.util.ArrayList;
|
|
|
|
|
import java.util.List;
|
|
|
|
|
@ -16,29 +15,32 @@ import Acquisition.DaqStatusDataUnit;
|
|
|
|
|
import Acquisition.DaqSystem;
|
|
|
|
|
import Array.ArrayManager;
|
|
|
|
|
import Array.Hydrophone;
|
|
|
|
|
import Array.HydrophoneLocator;
|
|
|
|
|
import Array.PamArray;
|
|
|
|
|
import Array.Streamer;
|
|
|
|
|
import Array.ThreadingHydrophoneLocator;
|
|
|
|
|
import PamController.PamControlledUnit;
|
|
|
|
|
import PamController.PamController;
|
|
|
|
|
import PamUtils.PamCalendar;
|
|
|
|
|
import PamUtils.PamUtils;
|
|
|
|
|
import PamguardMVC.PamDataBlock;
|
|
|
|
|
import metadata.MetaDataContol;
|
|
|
|
|
import metadata.deployment.DeploymentData;
|
|
|
|
|
import nilus.Audio;
|
|
|
|
|
import nilus.ChannelInfo;
|
|
|
|
|
import nilus.ChannelInfo.Sampling;
|
|
|
|
|
import nilus.ChannelInfo.Sampling.Regimen;
|
|
|
|
|
import nilus.Deployment;
|
|
|
|
|
import nilus.Deployment.Instrument;
|
|
|
|
|
import nilus.Deployment.SamplingDetails;
|
|
|
|
|
import nilus.Deployment.Sensors;
|
|
|
|
|
import nilus.DeploymentRecoveryDetails;
|
|
|
|
|
import nilus.GeometryTypeM;
|
|
|
|
|
import nilus.Helper;
|
|
|
|
|
import nilus.MarshalXML;
|
|
|
|
|
import pamMaths.PamVector;
|
|
|
|
|
import tethys.TethysLocationFuncs;
|
|
|
|
|
import tethys.TethysTimeFuncs;
|
|
|
|
|
|
|
|
|
|
/**
|
|
|
|
|
* Functions to gather data for the deployment document from all around PAMGuard.
|
|
|
|
|
* Functions to gather data for the deployment document from all around PAMGuard.
|
|
|
|
|
* @author dg50
|
|
|
|
|
*
|
|
|
|
|
*/
|
|
|
|
|
@ -46,42 +48,42 @@ public class DeploymentHandler {
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
/**
|
|
|
|
|
* Get an overview of all the deployments.
|
|
|
|
|
* Get an overview of all the deployments.
|
|
|
|
|
* @return
|
|
|
|
|
*/
|
|
|
|
|
public DeploymentOverview createOverview() {
|
|
|
|
|
// first find an acquisition module.
|
|
|
|
|
// first find an acquisition module.
|
|
|
|
|
PamControlledUnit aModule = PamController.getInstance().findControlledUnit(AcquisitionControl.class, null);
|
|
|
|
|
if (aModule instanceof AcquisitionControl == false) {
|
|
|
|
|
// will return if it's null. Impossible for it to be the wrong type.
|
|
|
|
|
// but it's good practice to check anyway before casting.
|
|
|
|
|
if (!(aModule instanceof AcquisitionControl)) {
|
|
|
|
|
// will return if it's null. Impossible for it to be the wrong type.
|
|
|
|
|
// but it's good practice to check anyway before casting.
|
|
|
|
|
return null;
|
|
|
|
|
}
|
|
|
|
|
// cast it to the right type.
|
|
|
|
|
// cast it to the right type.
|
|
|
|
|
AcquisitionControl daqControl = (AcquisitionControl) aModule;
|
|
|
|
|
AcquisitionParameters daqParams = daqControl.getAcquisitionParameters();
|
|
|
|
|
/**
|
|
|
|
|
* The daqParams class has most of what we need about the set up in terms of sample rate,
|
|
|
|
|
* number of channels, instrument type, ADC input range (part of calibration), etc.
|
|
|
|
|
* It also has a hydrophone list, which maps the input channel numbers to the hydrophon numbers.
|
|
|
|
|
* The daqParams class has most of what we need about the set up in terms of sample rate,
|
|
|
|
|
* number of channels, instrument type, ADC input range (part of calibration), etc.
|
|
|
|
|
* It also has a hydrophone list, which maps the input channel numbers to the hydrophon numbers.
|
|
|
|
|
* Realistically, this list is always 0,1,2,etc or it goes horribly wrong !
|
|
|
|
|
*/
|
|
|
|
|
// so write functions here to get information from the daqParams.
|
|
|
|
|
// so write functions here to get information from the daqParams.
|
|
|
|
|
// System.out.printf("Sample regime: %s input with rate %3.1fHz, %d channels, gain %3.1fdB, ADCp-p %3.1fV\n", daqParams.getDaqSystemType(),
|
|
|
|
|
// daqParams.getSampleRate(), daqParams.getNChannels(), daqParams.preamplifier.getGain(), daqParams.voltsPeak2Peak);
|
|
|
|
|
/**
|
|
|
|
|
* then there is the actual sampling. This is a bit harder to find. I thought it would be in the data map
|
|
|
|
|
* but the datamap is a simple count of what's in the databasase which is not quite what we want.
|
|
|
|
|
* we're going to have to query the database to get more detailed informatoin I think.
|
|
|
|
|
* I'll do that here for now, but we may want to move this when we better organise the code.
|
|
|
|
|
* but the datamap is a simple count of what's in the databasase which is not quite what we want.
|
|
|
|
|
* we're going to have to query the database to get more detailed informatoin I think.
|
|
|
|
|
* I'll do that here for now, but we may want to move this when we better organise the code.
|
|
|
|
|
* It also seems that there are 'bad' dates in the database when it starts new files, which are the date
|
|
|
|
|
* data were analysed at. So we really need to check the start and stop records only.
|
|
|
|
|
* data were analysed at. So we really need to check the start and stop records only.
|
|
|
|
|
*/
|
|
|
|
|
PamDataBlock<DaqStatusDataUnit> daqInfoDataBlock = daqControl.getAcquisitionProcess().getDaqStatusDataBlock();
|
|
|
|
|
// just load everything. Probably OK for the acqusition, but will bring down
|
|
|
|
|
// just load everything. Probably OK for the acqusition, but will bring down
|
|
|
|
|
daqInfoDataBlock.loadViewerData(0, Long.MAX_VALUE, null);
|
|
|
|
|
ArrayList<DaqStatusDataUnit> allStatusData = daqInfoDataBlock.getDataCopy();
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
ArrayList<RecordingPeriod> tempPeriods = null;
|
|
|
|
|
|
|
|
|
|
if (allStatusData == null || allStatusData.size() == 0) {
|
|
|
|
|
@ -95,7 +97,7 @@ public class DeploymentHandler {
|
|
|
|
|
System.out.println("Data appear to have no logged recording periods available either from the database or the raw recordings.");
|
|
|
|
|
}
|
|
|
|
|
int nPeriods = tempPeriods.size();
|
|
|
|
|
// now go through those and merge into longer periods where there is no gap between files.
|
|
|
|
|
// now go through those and merge into longer periods where there is no gap between files.
|
|
|
|
|
ListIterator<RecordingPeriod> iterator = tempPeriods.listIterator();
|
|
|
|
|
RecordingPeriod prevPeriod = null;
|
|
|
|
|
while (iterator.hasNext()) {
|
|
|
|
|
@ -108,7 +110,7 @@ public class DeploymentHandler {
|
|
|
|
|
long gap = nextPeriod.getRecordStart() - prevPeriod.getRecordStop();
|
|
|
|
|
long prevDur = prevPeriod.getRecordStop()-prevPeriod.getRecordStart();
|
|
|
|
|
if (gap < 3 || gap < prevDur/50) {
|
|
|
|
|
// ignoring up to 3s gap or a sample error < 2%.Dunno if this is sensible or not.
|
|
|
|
|
// ignoring up to 3s gap or a sample error < 2%.Dunno if this is sensible or not.
|
|
|
|
|
prevPeriod.setRecordStop(nextPeriod.getRecordStop());
|
|
|
|
|
iterator.remove();
|
|
|
|
|
nextPeriod = prevPeriod;
|
|
|
|
|
@ -121,16 +123,16 @@ public class DeploymentHandler {
|
|
|
|
|
DeploymentOverview deploymentOverview = new DeploymentOverview(false, tempPeriods);
|
|
|
|
|
return deploymentOverview;
|
|
|
|
|
// find the number of times it started and stopped ....
|
|
|
|
|
// System.out.printf("Input map of sound data indicates data from %s to %s with %d starts and %d stops over %d files\n",
|
|
|
|
|
// System.out.printf("Input map of sound data indicates data from %s to %s with %d starts and %d stops over %d files\n",
|
|
|
|
|
// PamCalendar.formatDateTime(dataStart), PamCalendar.formatDateTime(dataEnd), nStart, nStop, nFile+1);
|
|
|
|
|
// now work out where there are genuine gaps and make up a revised list of recording periods.
|
|
|
|
|
// now work out where there are genuine gaps and make up a revised list of recording periods.
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
/**
|
|
|
|
|
* Work out whether or not the data are evenly duty cycled by testing the
|
|
|
|
|
* distributions of on and off times.
|
|
|
|
|
* Work out whether or not the data are evenly duty cycled by testing the
|
|
|
|
|
* distributions of on and off times.
|
|
|
|
|
* @param tempPeriods
|
|
|
|
|
* @return
|
|
|
|
|
*/
|
|
|
|
|
@ -187,38 +189,38 @@ public class DeploymentHandler {
|
|
|
|
|
|
|
|
|
|
//in each channel
|
|
|
|
|
public ArrayList<DeploymentRecoveryPair> getDeployments() {
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
DeploymentOverview recordingOverview = createOverview();
|
|
|
|
|
|
|
|
|
|
// first find an acquisition module.
|
|
|
|
|
|
|
|
|
|
// first find an acquisition module.
|
|
|
|
|
PamControlledUnit aModule = PamController.getInstance().findControlledUnit(AcquisitionControl.class, null);
|
|
|
|
|
if (aModule instanceof AcquisitionControl == false) {
|
|
|
|
|
// will return if it's null. Impossible for it to be the wrong type.
|
|
|
|
|
// but it's good practice to check anyway before casting.
|
|
|
|
|
if (!(aModule instanceof AcquisitionControl)) {
|
|
|
|
|
// will return if it's null. Impossible for it to be the wrong type.
|
|
|
|
|
// but it's good practice to check anyway before casting.
|
|
|
|
|
return null;
|
|
|
|
|
}
|
|
|
|
|
// cast it to the right type.
|
|
|
|
|
// cast it to the right type.
|
|
|
|
|
AcquisitionControl daqControl = (AcquisitionControl) aModule;
|
|
|
|
|
AcquisitionParameters daqParams = daqControl.getAcquisitionParameters();
|
|
|
|
|
/**
|
|
|
|
|
* The daqParams class has most of what we need about the set up in terms of sample rate,
|
|
|
|
|
* number of channels, instrument type, ADC input range (part of calibration), etc.
|
|
|
|
|
* It also has a hydrophone list, which maps the input channel numbers to the hydrophon numbers.
|
|
|
|
|
* The daqParams class has most of what we need about the set up in terms of sample rate,
|
|
|
|
|
* number of channels, instrument type, ADC input range (part of calibration), etc.
|
|
|
|
|
* It also has a hydrophone list, which maps the input channel numbers to the hydrophon numbers.
|
|
|
|
|
* Realistically, this list is always 0,1,2,etc or it goes horribly wrong !
|
|
|
|
|
*/
|
|
|
|
|
// so write functions here to get information from the daqParams.
|
|
|
|
|
// so write functions here to get information from the daqParams.
|
|
|
|
|
// System.out.printf("Sample regime: %s input with rate %3.1fHz, %d channels, gain %3.1fdB, ADCp-p %3.1fV\n", daqParams.getDaqSystemType(),
|
|
|
|
|
// daqParams.getSampleRate(), daqParams.getNChannels(), daqParams.preamplifier.getGain(), daqParams.voltsPeak2Peak);
|
|
|
|
|
/**
|
|
|
|
|
* then there is the actual sampling. This is a bit harder to find. I thought it would be in the data map
|
|
|
|
|
* but the datamap is a simple count of what's in the databasase which is not quite what we want.
|
|
|
|
|
* we're going to have to query the database to get more detailed informatoin I think.
|
|
|
|
|
* I'll do that here for now, but we may want to move this when we better organise the code.
|
|
|
|
|
* but the datamap is a simple count of what's in the databasase which is not quite what we want.
|
|
|
|
|
* we're going to have to query the database to get more detailed informatoin I think.
|
|
|
|
|
* I'll do that here for now, but we may want to move this when we better organise the code.
|
|
|
|
|
* It also seems that there are 'bad' dates in the database when it starts new files, which are the date
|
|
|
|
|
* data were analysed at. So we really need to check the start and stop records only.
|
|
|
|
|
* data were analysed at. So we really need to check the start and stop records only.
|
|
|
|
|
*/
|
|
|
|
|
PamDataBlock<DaqStatusDataUnit> daqInfoDataBlock = daqControl.getAcquisitionProcess().getDaqStatusDataBlock();
|
|
|
|
|
// just load everything. Probably OK for the acqusition, but will bring down
|
|
|
|
|
// just load everything. Probably OK for the acqusition, but will bring down
|
|
|
|
|
daqInfoDataBlock.loadViewerData(0, Long.MAX_VALUE, null);
|
|
|
|
|
ArrayList<DaqStatusDataUnit> allStatusData = daqInfoDataBlock.getDataCopy();
|
|
|
|
|
long dataStart = Long.MAX_VALUE;
|
|
|
|
|
@ -241,24 +243,24 @@ public class DeploymentHandler {
|
|
|
|
|
break;
|
|
|
|
|
}
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
// System.out.printf("Input map of sound data indicates data from %s to %s with %d starts and %d stops over %d files\n",
|
|
|
|
|
|
|
|
|
|
// System.out.printf("Input map of sound data indicates data from %s to %s with %d starts and %d stops over %d files\n",
|
|
|
|
|
// PamCalendar.formatDateTime(dataStart), PamCalendar.formatDateTime(dataEnd), nStart, nStop, nFile+1);
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
// // and we find the datamap within that ...
|
|
|
|
|
// OfflineDataMap daqMap = daqInfoDataBlock.getOfflineDataMap(DBControlUnit.findDatabaseControl());
|
|
|
|
|
// if (daqMap != null) {
|
|
|
|
|
// // iterate through it.
|
|
|
|
|
// // iterate through it.
|
|
|
|
|
// long dataStart = daqMap.getFirstDataTime();
|
|
|
|
|
// long dataEnd = daqMap.getLastDataTime();
|
|
|
|
|
// List<OfflineDataMapPoint> mapPoints = daqMap.getMapPoints();
|
|
|
|
|
// System.out.printf("Input map of sound data indicates data from %s to %s with %d individual files\n",
|
|
|
|
|
// System.out.printf("Input map of sound data indicates data from %s to %s with %d individual files\n",
|
|
|
|
|
// PamCalendar.formatDateTime(dataStart), PamCalendar.formatDateTime(dataEnd), mapPoints.size());
|
|
|
|
|
// /*
|
|
|
|
|
// * clearly in the first database I've been looking at of Tinas data, this is NOT getting sensible start and
|
|
|
|
|
// * end times. Print them out to see what's going on.
|
|
|
|
|
// * end times. Print them out to see what's going on.
|
|
|
|
|
// */
|
|
|
|
|
//// for ()
|
|
|
|
|
// }
|
|
|
|
|
@ -267,18 +269,18 @@ public class DeploymentHandler {
|
|
|
|
|
DeploymentRecoveryDetails recovery = new DeploymentRecoveryDetails();
|
|
|
|
|
pair.deploymentDetails = deployment;
|
|
|
|
|
pair.recoveryDetails = recovery;
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
deployment.setTimeStamp(TethysTimeFuncs.xmlGregCalFromMillis(dataStart));
|
|
|
|
|
deployment.setAudioTimeStamp(TethysTimeFuncs.xmlGregCalFromMillis(dataStart));
|
|
|
|
|
recovery.setTimeStamp(TethysTimeFuncs.xmlGregCalFromMillis(dataEnd));
|
|
|
|
|
recovery.setAudioTimeStamp(TethysTimeFuncs.xmlGregCalFromMillis(dataEnd));
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
ArrayList<DeploymentRecoveryPair> drPairs = new ArrayList<>();
|
|
|
|
|
drPairs.add(pair);
|
|
|
|
|
return drPairs;
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
public Deployment createDeploymentDocument(int i, DeploymentRecoveryPair drd) {
|
|
|
|
|
Deployment deployment = new Deployment();
|
|
|
|
|
String id = String.format("%d", i);
|
|
|
|
|
@ -286,25 +288,79 @@ public class DeploymentHandler {
|
|
|
|
|
deployment.setDeploymentId(i);
|
|
|
|
|
deployment.setDeploymentDetails(drd.deploymentDetails);
|
|
|
|
|
deployment.setRecoveryDetails(drd.recoveryDetails);
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
TethysLocationFuncs.getTrackAndPositionData(deployment);
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
getProjectData(deployment);
|
|
|
|
|
|
|
|
|
|
getSamplingDetails(deployment);
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
getSensorDetails(deployment);
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
/**
|
|
|
|
|
* Stuff that may need to be put into the UI:
|
|
|
|
|
* Audio: can easily get current loc of raw and binary data, but may need to override these. I think
|
|
|
|
|
* this may be for the export UI ?
|
|
|
|
|
* Tracks: trackline information. General problem in PAMGUard.
|
|
|
|
|
* Audio: can easily get current loc of raw and binary data, but may need to override these. I think
|
|
|
|
|
* this may be for the export UI ?
|
|
|
|
|
* Tracks: trackline information. General problem in PAMGUard.
|
|
|
|
|
*/
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
return deployment;
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
/**
|
|
|
|
|
* Add project Metadata to a Deploymnet document. This is currently being
|
|
|
|
|
* made available in the MetaDataControl module which should be added to PAMGuard
|
|
|
|
|
* as well as the Tethys output module.
|
|
|
|
|
* @param deployment
|
|
|
|
|
*/
|
|
|
|
|
private boolean getProjectData(Deployment deployment) {
|
|
|
|
|
PamControlledUnit aUnit = PamController.getInstance().findControlledUnit(MetaDataContol.class, null);
|
|
|
|
|
if (aUnit instanceof MetaDataContol == false) {
|
|
|
|
|
return false;
|
|
|
|
|
}
|
|
|
|
|
MetaDataContol metaControl = (MetaDataContol) aUnit;
|
|
|
|
|
DeploymentData deploymentData = metaControl.getDeploymentData();
|
|
|
|
|
deployment.setProject(deploymentData.getProject());
|
|
|
|
|
deployment.setDeploymentAlias(deploymentData.getDeploymentAlias());
|
|
|
|
|
deployment.setSite(deploymentData.getSite());
|
|
|
|
|
deployment.setCruise(deploymentData.getCruise());
|
|
|
|
|
deployment.setPlatform(deploymentData.getPlatform());
|
|
|
|
|
deployment.setRegion(deploymentData.getRegion());
|
|
|
|
|
Instrument instrument = new Instrument();
|
|
|
|
|
instrument.setType(deploymentData.getInstrumentType());
|
|
|
|
|
instrument.setInstrumentId(deploymentData.getInstrumentId());
|
|
|
|
|
// get the geometry type from the array manager.
|
|
|
|
|
String geomType = getGeometryType();
|
|
|
|
|
instrument.setGeometryType(geomType);
|
|
|
|
|
deployment.setInstrument(instrument);
|
|
|
|
|
return true;
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
/**
|
|
|
|
|
* Get a geometry type string for Tethys based on information in the array manager.
|
|
|
|
|
* @return
|
|
|
|
|
*/
|
|
|
|
|
private String getGeometryType() {
|
|
|
|
|
PamArray array = ArrayManager.getArrayManager().getCurrentArray();
|
|
|
|
|
int nStreamer = array.getStreamerCount();
|
|
|
|
|
for (int i = 0; i < nStreamer; i++) {
|
|
|
|
|
Streamer streamer = array.getStreamer(i);
|
|
|
|
|
HydrophoneLocator locator = streamer.getHydrophoneLocator();
|
|
|
|
|
if (locator == null) {
|
|
|
|
|
continue;
|
|
|
|
|
}
|
|
|
|
|
if (locator instanceof ThreadingHydrophoneLocator) {
|
|
|
|
|
return "cabled";
|
|
|
|
|
}
|
|
|
|
|
else {
|
|
|
|
|
return "rigid";
|
|
|
|
|
}
|
|
|
|
|
}
|
|
|
|
|
return "unknown";
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
private boolean getSensorDetails(Deployment deployment) {
|
|
|
|
|
PamArray array = ArrayManager.getArrayManager().getCurrentArray();
|
|
|
|
|
Sensors sensors = new Sensors();
|
|
|
|
|
@ -322,7 +378,7 @@ public class DeploymentHandler {
|
|
|
|
|
PamVector hydLocs = array.getAbsHydrophoneVector(iPhone, timeMillis);
|
|
|
|
|
Audio audio = new Audio();
|
|
|
|
|
audio.setNumber(BigInteger.valueOf(iPhone));
|
|
|
|
|
audio.setSensorId(String.format("Hydrophone %d", iPhone)); // shold replace with serial number if it exists.
|
|
|
|
|
audio.setSensorId(String.format("Hydrophone %d", iPhone)); // shold replace with serial number if it exists.
|
|
|
|
|
GeometryTypeM geom = new GeometryTypeM();
|
|
|
|
|
geom.setXM(hydLocs.getCoordinate(0));
|
|
|
|
|
geom.setYM(hydLocs.getCoordinate(1));
|
|
|
|
|
@ -342,7 +398,7 @@ public class DeploymentHandler {
|
|
|
|
|
// e.printStackTrace();
|
|
|
|
|
// }
|
|
|
|
|
/**
|
|
|
|
|
* Need to be able to add the values from hydLocs to the geometry object, but can't.
|
|
|
|
|
* Need to be able to add the values from hydLocs to the geometry object, but can't.
|
|
|
|
|
*/
|
|
|
|
|
audioList.add(audio);
|
|
|
|
|
iPhone++;
|
|
|
|
|
@ -354,18 +410,18 @@ public class DeploymentHandler {
|
|
|
|
|
// // TODO Auto-generated catch block
|
|
|
|
|
// e.printStackTrace();
|
|
|
|
|
// }
|
|
|
|
|
deployment.setSensors(sensors);
|
|
|
|
|
deployment.setSensors(sensors);
|
|
|
|
|
return true;
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
/**
|
|
|
|
|
* Fill in the sampling details in a Deployment document.
|
|
|
|
|
* Fill in the sampling details in a Deployment document.
|
|
|
|
|
* @param deployment
|
|
|
|
|
*/
|
|
|
|
|
private boolean getSamplingDetails(Deployment deployment) {
|
|
|
|
|
SamplingDetails samplingDetails = new SamplingDetails();
|
|
|
|
|
// this is basically going to be a list of almost identical channel information
|
|
|
|
|
// currently just for the first acquisition. May extend to more.
|
|
|
|
|
// currently just for the first acquisition. May extend to more.
|
|
|
|
|
AcquisitionControl daq = (AcquisitionControl) PamController.getInstance().findControlledUnit(AcquisitionControl.class, null);
|
|
|
|
|
if (daq == null) {
|
|
|
|
|
return false;
|
|
|
|
|
@ -377,15 +433,15 @@ public class DeploymentHandler {
|
|
|
|
|
int[] hydroMap = daqParams.getHydrophoneList();
|
|
|
|
|
int[] inputMap = daqParams.getHardwareChannelList();
|
|
|
|
|
double vp2p = daqParams.getVoltsPeak2Peak();
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
List<ChannelInfo> channelInfos = samplingDetails.getChannel();
|
|
|
|
|
for (int i = 0; i < nChan; i++) {
|
|
|
|
|
ChannelInfo channelInfo = new ChannelInfo();
|
|
|
|
|
channelInfo.setStart(deployment.getDeploymentDetails().getAudioTimeStamp());
|
|
|
|
|
channelInfo.setEnd(deployment.getRecoveryDetails().getAudioTimeStamp());
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
BigIntegerConverter biCon = new BigIntegerConverter();
|
|
|
|
|
BigInteger chanNum = BigInteger.valueOf((long) i);
|
|
|
|
|
BigInteger chanNum = BigInteger.valueOf(i);
|
|
|
|
|
channelInfo.setChannelNumber(chanNum);
|
|
|
|
|
if (hydroMap != null) {
|
|
|
|
|
channelInfo.setSensorNumber(hydroMap[i]);
|
|
|
|
|
@ -402,7 +458,7 @@ public class DeploymentHandler {
|
|
|
|
|
nilus.ChannelInfo.Gain.Regimen aGain = new nilus.ChannelInfo.Gain.Regimen();
|
|
|
|
|
aGain.setGainDB(daqParams.getPreamplifier().getGain());
|
|
|
|
|
channelInfo.setGain(gain);
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Sampling sampling = new Sampling();
|
|
|
|
|
List<Regimen> regimens = sampling.getRegimen();
|
|
|
|
|
Sampling.Regimen regimen = new Sampling.Regimen();
|
|
|
|
|
@ -412,14 +468,14 @@ public class DeploymentHandler {
|
|
|
|
|
regimen.setSampleBits(system.getSampleBits());
|
|
|
|
|
}
|
|
|
|
|
regimens.add(regimen);
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
channelInfo.setSampling(sampling);
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
channelInfos.add(channelInfo);
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
/**
|
|
|
|
|
* Need something about duty cycling. this is probably something that will have to be added
|
|
|
|
|
* earlier to a wrapper around the Deployment class.
|
|
|
|
|
* Need something about duty cycling. this is probably something that will have to be added
|
|
|
|
|
* earlier to a wrapper around the Deployment class.
|
|
|
|
|
*/
|
|
|
|
|
}
|
|
|
|
|
deployment.setSamplingDetails(samplingDetails);
|
|
|
|
|
|
kbolaughlin