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Merge branch 'main' into Tethys
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7efc824226
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README.html
47
README.html
@ -478,9 +478,8 @@ files) file performance</span></b><span lang=EN-US> when scrolling through
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audio data in Viewer mode. </span></p>
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audio data in Viewer mode. </span></p>
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<p class=MsoNormal><b><span lang=EN-US>Viewer Launch</span></b><span
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<p class=MsoNormal><b><span lang=EN-US>Viewer Launch</span></b><span
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lang=EN-US> by right clicking on sqlite database and selecting ‘open with / Pamguard
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lang=EN-US> by right clicking on sqlite database and selecting <20>open with / Pamguard
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ViewerMode launcher’ menu option.</span></p>
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ViewerMode launcher<65> menu option.</span></p>
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<h2><span lang=EN-US>Bug Fixes</span></h2>
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<h2><span lang=EN-US>Bug Fixes</span></h2>
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<p class=MsoNormal><b><span lang=EN-US>Logger Forms</span></b></p>
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<p class=MsoNormal><b><span lang=EN-US>Logger Forms</span></b></p>
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@ -527,7 +526,7 @@ clicks not being correctly reassigned to different events. </span></p>
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<p class=MsoNormal><b><span lang=EN-US>Screen Position</span></b><span
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<p class=MsoNormal><b><span lang=EN-US>Screen Position</span></b><span
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lang=EN-US>: When using multiple monitors, if you move a configuration to a
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lang=EN-US>: When using multiple monitors, if you move a configuration to a
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computer with a different monitor layout, the GUI should work out if it’s
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computer with a different monitor layout, the GUI should work out if its
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opening on a screen area which no longer exists and move itself onto the
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opening on a screen area which no longer exists and move itself onto the
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primary monitor. </span></p>
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primary monitor. </span></p>
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@ -549,8 +548,8 @@ were reading local time, even when set to use UTC. </span></p>
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which mostly occurred when processing large datasets of many offline files, has
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which mostly occurred when processing large datasets of many offline files, has
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been fixed.</span></p>
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been fixed.</span></p>
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<p class=MsoNormal><span lang=EN-US>Data Map: “Scroll To Data” pop-up menu,
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<p class=MsoNormal><span lang=EN-US>Data Map: Scroll To Data pop-up menu,
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which didn’t always scroll to the correct place, is now fixed. </span></p>
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which didnt always scroll to the correct place, is now fixed. </span></p>
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<p class=MsoNormal><span lang=EN-US>Bearing Localiser offline: If reprocessing
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<p class=MsoNormal><span lang=EN-US>Bearing Localiser offline: If reprocessing
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bearings, the localizer was not correctly loading required raw or FFT data to
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bearings, the localizer was not correctly loading required raw or FFT data to
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@ -573,7 +572,7 @@ files and stores them within the PAMGuard configuration. This does not affect
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processing, but is important for record keeping. </span></p>
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processing, but is important for record keeping. </span></p>
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<p class=MsoNormal><span lang=EN-US>GPS options to use any valid RMC or GGA
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<p class=MsoNormal><span lang=EN-US>GPS options to use any valid RMC or GGA
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string. Not all GPS receivers output their RMC data as GPRMC – e.g. some may
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string. Not all GPS receivers output their RMC data as GPRMC e.g. some may
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output as GNRMC. A new option allows the GPS module to use any string, whatever
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output as GNRMC. A new option allows the GPS module to use any string, whatever
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the first two characters of the string name may be. </span></p>
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the first two characters of the string name may be. </span></p>
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@ -582,14 +581,14 @@ the first two characters of the string name may be. </span></p>
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<h2><span lang=EN-US>Bug Fixes</span></h2>
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<h2><span lang=EN-US>Bug Fixes</span></h2>
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<p class=MsoNormal><span lang=EN-US>Use of localization sensor and orientation
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<p class=MsoNormal><span lang=EN-US>Use of localization sensor and orientation
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data for static hydrophones had a bug whereby it would continually ‘forget’
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data for static hydrophones had a bug whereby it would continually forget
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angle offsets applied to static hydrophones in viewer mode. This is now fixed. </span></p>
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angle offsets applied to static hydrophones in viewer mode. This is now fixed. </span></p>
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<p class=MsoNormal><span lang=EN-US>Click tool bar: Correctly shows event
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<p class=MsoNormal><span lang=EN-US>Click tool bar: Correctly shows event
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selection options even if no species classification options are in place. </span></p>
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selection options even if no species classification options are in place. </span></p>
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<p class=MsoNormal><span lang=EN-US>Fixed Landmarks: Earlier versions were
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<p class=MsoNormal><span lang=EN-US>Fixed Landmarks: Earlier versions were
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‘losing’ these every time PAMGuard started or new data were loaded in viewer
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losing these every time PAMGuard started or new data were loaded in viewer
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mode. Now fixed. </span></p>
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mode. Now fixed. </span></p>
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<p class=MsoNormal><span lang=EN-US>ROCCA: Fixed (another) memory leak which
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<p class=MsoNormal><span lang=EN-US>ROCCA: Fixed (another) memory leak which
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@ -608,11 +607,11 @@ processing.</span></p>
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<p class=MsoNormal><span lang=EN-US>New sound type for simulated sounds which
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<p class=MsoNormal><span lang=EN-US>New sound type for simulated sounds which
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generates random chirps between around 200 and 800Hz, roughly the frequency
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generates random chirps between around 200 and 800Hz, roughly the frequency
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you’d expect sound from higher frequency baleen whales, such as humpbacks, to
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youd expect sound from higher frequency baleen whales, such as humpbacks, to
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vocalise at. </span></p>
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vocalise at. </span></p>
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<p class=MsoNormal><span lang=EN-US>Hiding tool tips. A menu item to
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<p class=MsoNormal><span lang=EN-US>Hiding tool tips. A menu item to
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permanently turn off all tool tips, or tap the ‘Esc’ key to turn them off for 6
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permanently turn off all tool tips, or tap the Esc key to turn them off for 6
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seconds if they are getting in the way, particularly when trying to interact
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seconds if they are getting in the way, particularly when trying to interact
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with displays using the mouse. </span></p>
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with displays using the mouse. </span></p>
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@ -633,7 +632,7 @@ whistle classification module.</span></p>
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<h2><span lang=EN-US>New Features</span></h2>
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<h2><span lang=EN-US>New Features</span></h2>
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<p class=MsoNormal><span lang=EN-US>SoundTrap SUD file reading. If you’re using
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<p class=MsoNormal><span lang=EN-US>SoundTrap SUD file reading. If youre using
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SoundTrap autonomous recorders from Ocean Instruments, you no longer need to
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SoundTrap autonomous recorders from Ocean Instruments, you no longer need to
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decompress the SoundTrap files prior to processing. This will save time and a
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decompress the SoundTrap files prior to processing. This will save time and a
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lot of disk space. Extraction of clicks from the inbuilt SoundTrap Click
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lot of disk space. Extraction of clicks from the inbuilt SoundTrap Click
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@ -697,7 +696,7 @@ audio files. </span></p>
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<h2><span lang=EN-US>Bug Fixes</span></h2>
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<h2><span lang=EN-US>Bug Fixes</span></h2>
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<p class=MsoNormal><span lang=EN-US>Soundtrap DWV import. Will now generate
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<p class=MsoNormal><span lang=EN-US>Soundtrap DWV import. Will now generate
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binary files even if DWV file doesnÂ’t exist (which is correct behavior in
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binary files even if DWV file doesnÂt exist (which is correct behavior in
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quiet conditions when no clicks were detected). </span></p>
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quiet conditions when no clicks were detected). </span></p>
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<p class=MsoNormal><span lang=EN-US>Spectrogram. Changes to stop occasional
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<p class=MsoNormal><span lang=EN-US>Spectrogram. Changes to stop occasional
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@ -732,8 +731,8 @@ running in real time. Added template names based on file names. </p>
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<p class=MsoNormal>#13 Merging files when offline processing file folders: Had
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<p class=MsoNormal>#13 Merging files when offline processing file folders: Had
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an error introduced in last release which caused it to fail to recognise gaps
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an error introduced in last release which caused it to fail to recognise gaps
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between files, meaning that some output data (i.e. after a gap) would have an
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between files, meaning that some output data (i.e. after a gap) would have an
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incorrect time stamp. This did not affect data if the ‘merge contiguous
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incorrect time stamp. This did not affect data if the ÃÂmerge contiguous
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files’ option was not selected. </p>
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filesÃÂ option was not selected. </p>
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<p class=MsoNormal>#14 Logger forms data were not plotting correctly. This was
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<p class=MsoNormal>#14 Logger forms data were not plotting correctly. This was
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due to the required data selection functions not being fully implemented. This
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due to the required data selection functions not being fully implemented. This
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@ -805,7 +804,7 @@ downloads area <a href="http://www.pamguard.org/downloads.php?cat_id=3">here</a>
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<p class=MsoNormal><b><span lang=EN-US>Detection Group Localiser</span></b><span
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<p class=MsoNormal><b><span lang=EN-US>Detection Group Localiser</span></b><span
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lang=EN-US> </span></p>
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lang=EN-US> </span></p>
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<p class=MsoNormal>This module has been renamed “Detection Grouper”, so
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<p class=MsoNormal>This module has been renamed ÃÂDetection GrouperÃÂ, so
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as to avoid confusion with the Group 3D localizer. This is because the
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as to avoid confusion with the Group 3D localizer. This is because the
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Detection Grouper is more for organizing data into groups to be localized than
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Detection Grouper is more for organizing data into groups to be localized than
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it is for doing localization.</p>
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it is for doing localization.</p>
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@ -927,10 +926,10 @@ included in a future release. </p>
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<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>17. </span><span
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<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>17. </span><span
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lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> </span><span
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lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> </span><span
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lang=EN-US> </span>An implementation of the Generalized Power Law Detector,
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lang=EN-US> </span>An implementation of the Generalized Power Law Detector,
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developed by Tyler Helble ([Helble et al., ‘A generalized power-law detection
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developed by Tyler Helble ([Helble et al., ÃÂA generalized power-law
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algorithm for humpback whale vocalizations’, The Journal of the Acoustical
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detection algorithm for humpback whale vocalizationsÃÂ, The Journal of the
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Society of America, vol. 131, no. 4, pp. 2682–2699, 2012) is now available.
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Acoustical Society of America, vol. 131, no. 4, pp. 2682ÃÂ2699, 2012) is now
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For details, see the online help </p>
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available. For details, see the online help </p>
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<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>18. </span><span
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<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>18. </span><span
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lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> </span><span
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lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> </span><span
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@ -2202,7 +2201,7 @@ file format is the addition of a Unique Data Identifier (UID) to each unit of
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data. This is intended to aid in offline analysis by making it easier for the
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data. This is intended to aid in offline analysis by making it easier for the
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user to link what they are seeing on different PAMGuard displays and also to
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user to link what they are seeing on different PAMGuard displays and also to
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link with any data post processed in Matlab or other custom analysis software.
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link with any data post processed in Matlab or other custom analysis software.
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UID’s are also added to PAMGuard database tables. </span></p>
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UIDÃÂs are also added to PAMGuard database tables. </span></p>
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<h4><span lang=EN-US>Converting Old Data</span></h4>
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<h4><span lang=EN-US>Converting Old Data</span></h4>
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@ -2210,13 +2209,13 @@ UIDÂs are also added to PAMGuard database tables. </span></p>
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viewer they will automatically be converted. For safety, the original binary
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viewer they will automatically be converted. For safety, the original binary
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files will not be overwritten and the new data will be placed in a new folder
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files will not be overwritten and the new data will be placed in a new folder
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on your computer with the same path as the old data, but suffixed with
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on your computer with the same path as the old data, but suffixed with
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‘_WithUID’, e.g. if your binary data were previously stored in the folder
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ÃÂ_WithUIDÃÂ, e.g. if your binary data were previously stored in the folder
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C:\MySurvey\binarydata the new data will be written to
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C:\MySurvey\binarydata the new data will be written to
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C:\MySurvey\binarydata_WithUID. </span></p>
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C:\MySurvey\binarydata_WithUID. </span></p>
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<p class=MsoNormal><span lang=EN-US>The additional UID column will be added to
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<p class=MsoNormal><span lang=EN-US>The additional UID column will be added to
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all database tables and populated with unique values. For data which are stored
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all database tables and populated with unique values. For data which are stored
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in both the binary files and in database tables, the same UID’s will be used
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in both the binary files and in database tables, the same UIDÃÂs will be used
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in both data stores. </span></p>
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in both data stores. </span></p>
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<h3><span lang=EN-US>New Displays</span></h3>
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<h3><span lang=EN-US>New Displays</span></h3>
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@ -2450,7 +2449,7 @@ November 2016</span></h1>
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<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>1.
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<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>1.
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Bug 303. Some ASIO sound cards not working with either ASIO system in PAMGuard.
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Bug 303. Some ASIO sound cards not working with either ASIO system in PAMGuard.
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For the PAMGuard ASIO system, this was due to a data format used by some sound
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For the PAMGuard ASIO system, this was due to a data format used by some sound
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cards never being properly implemented. For the “New ASIO system” which
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cards never being properly implemented. For the ÃÂNew ASIO systemÃÂ which
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is based on jAsioHost, the unpacking of that format contained a bug which
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is based on jAsioHost, the unpacking of that format contained a bug which
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returned incorrect numbers, so data were swamped with noise. Both systems are
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returned incorrect numbers, so data were swamped with noise. Both systems are
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now fixed. By preference, users should use the PAMGuard ASIO system since the
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now fixed. By preference, users should use the PAMGuard ASIO system since the
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